Array 1 731165-709528 **** Predicted by CRISPRDetect 2.4 *** >NC_010175.1 Chloroflexus aurantiacus J-10-fl, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================================== ================== 731164 36 100.0 40 .................................... ATTAGACTGACGGTCATTTACTCCCTCCTATTCAACAATT 731088 36 100.0 45 .................................... ATCTCTCCCTTCTGTTTCTTATCTCTTATGCTATTATTATAATAT 731007 36 100.0 42 .................................... ATGAAGCTGCCGCGCCCCCTCACCCCGGCAGAGGTGGAGCTG 730929 36 100.0 41 .................................... ATAGCCAGCCGAGTTCCGTTCCGCGGAACTCTACAATCTCG 730852 36 100.0 40 .................................... AAGATGTACTCTCCCCCCTTTAGCTGCGCCCGGTACTCAC 730776 36 100.0 45 .................................... AGTTGTGTTGATGTCGTAGAGCGCGTAGAGCTTCTCAGAGCCTGG 730695 36 100.0 39 .................................... AGTGCACTCTCCGCATCTCCTCCACGTTGGAAGTGGAGG 730620 36 100.0 39 .................................... AGTGCACTCTCCGCATCTCCTCCACGTTGGAAGTGGAGG 730545 36 100.0 39 .................................... ACCGCGTGAGTGTCCTCCCCGGCCCACCGCGACCAGTTG 730470 36 100.0 45 .................................... ATTATACGGAATGTCTGCCCACCGGTAATACGCCGAGCGGTACGG 730389 36 100.0 43 .................................... AATAGGCTGAGTGGGCAACCGCTCAGCCTACTTTTTTTTGTTT 730310 36 100.0 44 .................................... ATAAAAATTTGAGGGGCAGCTTCGTTGCCGCCCCTCAAACGAAA 730230 36 100.0 43 .................................... ATAGAAGTGACGAAGGACAAGGTGACAGCAAAGAAAGGAGAAA 730151 36 100.0 41 .................................... ATCGCTCCCGTTTCGTCTCGAAGCCAACGTAACGTATACCC 730074 36 100.0 43 .................................... ACCTCTACCGCGTTGCTCGACTGGCGCTCGACCATTCAAAAAT 729995 36 100.0 39 .................................... ACTCAAAATTGGATCGTTTCTGTCGGAAGCGTTAGCTCC 729920 36 100.0 41 .................................... AGACAATACAAAAAGCCCCGGCGATACCGCCGGGGCTTTGT 729843 36 100.0 40 .................................... AGTCATCTTTCAGGTGGAGGGTTGCGTATACCTTGCCAGC 729767 36 100.0 44 .................................... AGCCTTTGCGCCGCTGGTGGAGGCAATCGTCTCGACGATCGTCG 729687 36 100.0 41 .................................... AGGTTATTATGGGAAGGCGACGTACTCAAGTCGCCACTTAA 729610 36 100.0 42 .................................... AGTCGCAGCTTACGTATAGTCCTTCAAACAGTCACGGTGTGT 729532 36 100.0 39 .................................... ATCCGAATTCCTTACTATATGGGTGGCGCGGTGCATCCG 729457 36 100.0 46 .................................... ACCAACATCGCCCGCGTCGAACTTGGATTACCGATGGTGCATTCCA 729375 36 100.0 42 .................................... ACGGAGGCAGGCGAGGTACTTGAAACCGTCGCCCGCTGGTGG 729297 36 100.0 44 .................................... ACTAAACAACAACGCGCCGGTATATAACGGGCGCGCTAATTTTT 729217 36 100.0 41 .................................... ATCAATCTATCTCGGCACGTCGCTCGACGGGTCAACGTGGA 729140 36 100.0 42 .................................... AAACCAACTGCTACAGTACGCCGAGACAATGTTTAACCTCGG 729062 36 100.0 43 .................................... ATCGTCTAAGCGCGGCCCACAGTGCTGCGGCACAGAGTAGTAC 728983 36 100.0 40 .................................... AATAATGCAGTGTTGTGACACCGTCAGCGCGCTGGGCTGT 728907 36 100.0 44 .................................... AACATCTAACGCAGCGTCGTTTGCACCGCAGCGCATTGTCGTAC 728827 36 100.0 45 .................................... AACAACTAGCAGCGTCTTGCGTGCCGTTGCCGGTTGATCCAGCAG 728746 36 100.0 44 .................................... ATCCAGGGAAAACCCTTTCACCTTTGCCCAGCCGTCTTTCTTAG 728666 36 100.0 41 .................................... ATCGATCAGCATGTGCGGAATAGGTAGGGTCGAAGTATCAA 728589 36 100.0 43 .................................... ATGGTCAACGAAGGCGAAGACCACACACCCAGGGGTCAGGTTC 728510 36 100.0 41 .................................... ACCATCACGATACATTTCGGAGAGCGTCTTGACAAAACTAT 728433 36 100.0 41 .................................... AGTATCACCTCCTTTCGTTTGTGACATACGTAGTCACTGTA 728356 36 100.0 44 .................................... ACGATTGATGCTGCGACTATCACGGGAACATCAATTTCCGGCGG 728276 36 100.0 47 .................................... ACGTCATTGACGCCGACACCCCTGCACTCGCGGCGGCACTGCTCGAT 728193 36 100.0 41 .................................... ACTCCATATGTCTCGAACTCAAGGCATGCAAAGGGGAGCGG 728116 36 100.0 42 .................................... ACCAGGCAGTGAGCAACATCACGAGGGCGGGCCGGCTGATAC 728038 36 100.0 43 .................................... AAAAGAGTAATGTCAATCTATGCCGTCATCATGCATGTCGTCA 727959 36 100.0 42 .................................... ACACGTATAGAGACCGGTATTATTTAGCACCACCCGCGCCCC 727881 36 100.0 43 .................................... ACCGCCACCGACGGGTCGCCGGTTAACGACCCGCAATCTTGCC 727802 36 100.0 44 .................................... ACCGAACGCCTCCAGCACCGCGCCGATCCGCTGCGCGATCTGGT 727722 36 100.0 40 .................................... AGTGAAATTAGTAAACGCGCCGGCGGTAATTTTTTACAAC 727646 36 100.0 43 .................................... AGCGCTAAAATAAAAATTTGAGAGGCAGCTTCGTTGCTGCCCC 727567 36 100.0 43 .................................... ACTCCAGCAGACGCCGGATGTGACCGACTACCCAATCCGGTAC 727488 36 100.0 43 .................................... ATGATTATTGCGCTGGTCATTCCCGAACTAATGCAAGTACCGG 727409 36 100.0 38 .................................... ACTCCATAACATCCCTCCTGCGAGTAGTCATCCTGTCT 727335 36 100.0 42 .................................... ACAGCGTATCAACATAAATTGACGTATCAAATAACGTACAAA 727257 36 100.0 43 .................................... ATCATCGCGTATGATTGAGGCATTCCGACACGCTAAAGTCGGC 727178 36 100.0 41 .................................... ACAAACAGGTTGTGGTGTAATGATAAAGATAGAGATTGTTG 727101 36 100.0 42 .................................... AGCTATGACCTCGCCGCCTCGACACGCACCTCGGCGGACTAC 727023 36 100.0 41 .................................... AGGACGGAGCGCGCTAGCCGAAACCATTGTTCGCTCTATCG 726946 36 100.0 41 .................................... AAAATTACGAGCCAAGAACGGAACGCTCATACGCGATGTAC 726869 36 100.0 42 .................................... ACAATTACATTCAACAAGTGCAGCGCGTCCTTCCTAAGCTTG 726791 36 100.0 39 .................................... ATCAAAAACACGTCGTTTACCCGTTGACGATGTGCTGAG 726716 36 100.0 45 .................................... ATCATAGGTCACATTTGAACTTGTGGTAAAAGCAGCATCGCCAAC 726635 36 100.0 43 .................................... ACCACTCGATTGCTTCTTCGGCGTCGAGCGAGCGAGCCTCTTC 726556 36 100.0 44 .................................... AGTATCGGTATTTGGGCGCTATGTACAATAGTTGGAAAGGGTAG 726476 36 100.0 40 .................................... AACAAACCGGCGAATTGGAACGTTGCTCGCGTGAATACGC 726400 36 100.0 46 .................................... AGTATACGTTTGTGGATTGTACGTAATAGTTGGTTGCATAGTACCT 726318 36 100.0 42 .................................... AGGCAAACATTGCATCCATCCGCTAATGCTCATCCCGATCCG 726240 36 100.0 44 .................................... AGCACAACGTGTTCCGCAATCCGGCGCGGGCGGAATGCGCGGAG 726160 36 100.0 44 .................................... AAACGAGTTTAAGCGCACCGGCGACGCTAACCAGCTACTTGAGG 726080 36 100.0 39 .................................... ATTGTTGCTTGCGCAACCGTTCCTTCTGCCGCTGCGCCG 726005 36 100.0 44 .................................... ACTCATATTGTGAATTATCACCATTGCTGAGATACGGCCCTTTT 725925 36 100.0 46 .................................... AACACCAGCCCCTCGCGGCTGTAGTGCTGTTGCGTCAGCCGGCTGG 725843 36 100.0 44 .................................... ACTCAAGCCGCCATAGGGCCGGGGGTTCGATCTTGGACATGTAA 725763 36 100.0 42 .................................... ATCACGTAGGCGGTTAACCAGCCTACGACCAATGCACCTTCC 725685 36 100.0 45 .................................... ACGCTCCCCCCAATTTGGCGCATTGCTGCCGGCTGCCGTCGTTGA 725604 36 100.0 40 .................................... AGGAGGGTACTTTTTGGTTGGAAACGGTGTTGGACAGTCA 725528 36 100.0 40 .................................... ATGCATTTCTCCGCTTTCCAATGCTTAGTGTCATTTTGCG 725452 36 100.0 44 .................................... ACGTAGAATGGGGTTGGGTGCCTTCACGCGTACCAACCCATTCC 725372 36 100.0 42 .................................... ACGGAAATGCAGGCTCTTGTTTGCGTAAGCGATGCAATCCGA 725294 36 100.0 42 .................................... AGCGCCAGTCGAGCGACTCGAGCAACGCGGTAGAGAGAGGAG 725216 36 100.0 41 .................................... AGCAATGGCACAACGGCTTGACGGCGGGGGATGCACAATGA 725139 36 100.0 43 .................................... AAACGTAAACATGGTTTTTCCCTCCTCTTGTTAGCGACTTGAT 725060 36 100.0 39 .................................... ATCGCCCACTCGACGCACTCCGCGAGGGAGCCCGAGTGG 724985 36 100.0 42 .................................... ATTTCGAAAATTGCGTTCGATGAAGCAGGCGCACGCCTGCTC 724907 36 100.0 41 .................................... ACGCACCGTCTGTCGCTGTGTTTACTCGCGCCACAATCTGA 724830 36 100.0 43 .................................... ACTTTTCTGAGTAAGAAAAGGGCCGACCAAAAATACCTTGTCG 724751 36 100.0 40 .................................... ACGGAATGCAGCGCCTCATCGACCTCTTTACCCGCCTTGC 724675 36 100.0 41 .................................... ATGTGCTTGCACAATTTGCTGTGCAACTGTATTGCTTGCCG 724598 36 100.0 43 .................................... ACGATACACACGTGGTAACTCTGTAACCCTTTAGCACGTAGCT 724519 36 100.0 39 .................................... AGGGGTATACGTGCGCTGCGGCGTGTACGCAACCTCTAC 724444 36 100.0 43 .................................... AACGTACACTATGATTAAGTACGTGCCCGGCTGGCAACCATTC 724365 36 100.0 42 .................................... AAAACTGCAACGACAAGGAGGAAAACAATGTTGTTCAAAGTC 724287 36 100.0 41 .................................... ATCCGAAAGATAAATCCTTCAACCTCACCGTTATTATCTGC 724210 36 100.0 43 .................................... AGGATCGCGTCGTAGTCCTGCAATCCGGTGGGTTTGTCTAACA 724131 36 100.0 46 .................................... ATTGCGCGCTTGGATTGCGCGCTTAGATTGCGCGCTTAGATTGCGC 724049 36 100.0 44 .................................... ACGAGAGTTGGTCCGGTATTTTAGTCACCGGATACGGATAATCA 723969 36 100.0 45 .................................... AGCAACGCCGTGCAACCGATCCACGCCACCACAGAATGCTAATCC 723888 36 100.0 45 .................................... ATTTAATCCGTGAACAACTCCTCTGCATTCGCTAGTTCTAATTCT 723807 36 100.0 43 .................................... AGCTACCTCACGCGCAGCCCGGACGAGGTATGATCCTAGCTTG 723728 36 100.0 45 .................................... AGAGACGGAGCCGGCATTTCGGCAGATCGTGCTGACGGCGCACAC 723647 36 100.0 39 .................................... AGTCTGCTCCATACGACCATGCGCGGTATGTACGTCTAC 723572 36 100.0 45 .................................... AGCCTAATTACAAAGTGCATTTGCGCCGCTTACAAACCCGTTTTT 723491 36 100.0 37 .................................... AGACTAGAGAGAGTTACATCAGTGCGCAGACAAGTGC 723418 36 100.0 42 .................................... CCTACAACACGACTACTCTTGATCTTCATCGACCCCTTCTGT 723340 36 100.0 44 .................................... CCGAACAGTAAGCGATTTGCTGCGATAACATTTCGTCAAGCGCG 723260 36 100.0 42 .................................... CCGGACCACCCACACGTACACTCCCGGGCGCAATTGCGCCCG 723182 36 100.0 38 .................................... CCTGATGCTCCGCTTACCGCAGCACAGCGTGTAGCGCA 723108 36 100.0 42 .................................... CGTCAACAGCAAGTAATTCGCGCTGCCAACGGCGGATAAGAA 723030 36 100.0 43 .................................... CCGCAAAATATACGTGTCAATATCCATCTTGTCGTACTGAAAC 722951 36 100.0 42 .................................... CTTGAAACAAGATACAGTCCCTTTTCGTCGCTTGCCGGCACA 722873 36 100.0 42 .................................... CCGCTATCCGAACCGCTTGCTCGTCGCGTTTTGCGATCTATC 722795 36 100.0 45 .................................... CCCGTGACACAAGGGATCGACCAGATGGCGACGCGCGTGTACGCC 722714 36 100.0 42 .................................... CGCAACGCTGTTGTACGCCGATAAGCGTGTCATTAAGTGGCG 722636 36 100.0 45 .................................... CACTTTCTCTTTTAAGTTAACAGCGTCGCTATATGAACAGTTTTC 722555 36 100.0 42 .................................... CCCTACAACTGTGTCAATTCTTCGCTCCGCTTTGTGTTCTTC 722477 36 100.0 39 .................................... CCCAAAACGGCAGGCAGGTGAGAGATGATGGAAATGCTG 722402 36 100.0 40 .................................... CAAGCGATCGCGGACGCGATCGCCAACTACCGCTAAGTTT 722326 36 100.0 41 .................................... CGTCAGCGAGCAGCGCGTCGCGTGGGCGCTTGACATTGTGT 722249 36 100.0 44 .................................... CCCAGCCCTGTTCGATTTCTTTGTGCCACTGCGATCCTTCCTCC 722169 36 100.0 41 .................................... CCCATCTCTTGCAATTTGTTTCAGGGAAAACTATTTCACAG 722092 36 100.0 41 .................................... CCGTCTGCGCCAGCGCATTGGCCAGCGCCAGCGCCTCGTGA 722015 36 100.0 40 .................................... CCATCATTCCTGCGTTCGCGTTACTTCTTATTGTATGGAA 721939 36 100.0 44 .................................... CACAATGTTTTTATGACAACGGAGGCAATTTTTGATGTGTTTGG 721859 36 100.0 44 .................................... CCGGTACGACCACCTACACCTTCCCGAACGCGATCATCACATCG 721779 36 100.0 39 .................................... CCGTGTCGTAGAGAAGGGGTCGGTAGTGTGGTTCAGGGT 721704 36 100.0 44 .................................... CCGTTAGGACGCAAACGCATGTTCGATCTGCGTAATGCGGATCG 721624 36 100.0 43 .................................... CTCGAGATCGACGCCTTGCGCCATCGCTCGACCACGCGATCAG 721545 36 100.0 46 .................................... CTTTGTTTGTTGTAAGGGTGTTGACAAGTTGGTGGTGGTGGTGTGG 721463 36 100.0 44 .................................... CAGTTCAAAGTACGACATACTGTCCCCCTTTCGTTGTGTATGTT 721383 36 100.0 41 .................................... CACAAAGACCCTTCTTGCTCGCGCACAGCGTGAACAAGCGA 721306 36 100.0 45 .................................... CCTCATAAGAGGGGTCCCGACGTACACATAGTCCCACCCCTGGGG 721225 36 100.0 41 .................................... CGTAGCCACGGCAAAAAGGCCTCTGTTGGTACCCAATGTAA 721148 36 100.0 44 .................................... CCTGCTCGCTGCTGCGCAGTATGCTGAACTGCGCTGAGCAGATG 721068 36 100.0 41 .................................... CGCGATTTGCGTGACGACCTGATTGACGCAATTGCTGCGAA 720991 36 100.0 40 .................................... CCCGGCGTTTCAGCGTGTCGCCGAGCGACTATTTGCGTGA 720915 36 100.0 42 .................................... CGATAGCGGAAGCGGAGGCGGAAGGAAAAGCGGATGAAGCAG 720837 36 100.0 42 .................................... CTTTCGGCAACCGCGCTCCGTTCCGTCGGTGTCAATTGTCGC 720759 36 100.0 40 .................................... CGTCAACGATGTGCTGCGGTCTCCCCCAGCGATACCCTAC 720683 36 100.0 45 .................................... CCTAACGTTGCATGAATGCTGATAGCTACTCGCCACGCCATGTCG 720602 36 100.0 40 .................................... CAACGATGTTACTCGTCGCGGGATCACTCCCGCGTTTTCC 720526 36 100.0 42 .................................... CCGGATGGTTTCACAGTCGTGAGCCGGATCGACGCAATTGGT 720448 36 100.0 43 .................................... CGCAGCAAGCAACCCTGTCACGCCCCAAAGCACGAGCAGGTAC 720369 36 100.0 42 .................................... CCCAAGTTTCAAAAATGAGCCGAACGACACCGGCAACTGTGT 720291 36 100.0 40 .................................... CGCCATAAAGCTGGCGGCTCGAGCATGCCCATGTAAGTTG 720215 36 100.0 46 .................................... CGCGCGATTTCGTAGATATCGCCGTCGCTGTCGACGGCGACAGTAA 720133 36 100.0 43 .................................... CTGTAATTCATGCTACCTCCCCTCATACGCCATGAAGTATTCC 720054 36 100.0 46 .................................... CCTCCTGCTATGCCTGCCGATCCATGGACGCTCGCCGAGCCGGGCG 719972 36 100.0 40 .................................... CTAACATGCTCGAAACATTCGCTTCGTTTCCTTCCCTCGT 719896 36 100.0 43 .................................... CTTCCGAACAACGCAAACCCCTCAATATCAATCGAAACGCCAG 719817 36 100.0 44 .................................... CGCGATTAAGGCGCTGGAGGCGAAAGCCAGCGCGGGTTGGGTCA 719737 36 100.0 44 .................................... CCCACATAATATCCGCCGTCCACCCACCGGCGCCGTCCACCTAT 719657 36 100.0 45 .................................... CGTTGTGGACAGCGCGGTATGTACTGTAGACACTGCTTGTAGCGT 719576 36 100.0 44 .................................... CTGGATCGCGCAAGACCCGGAAACAAAACAGTGGGTTCCGGTGT 719496 36 100.0 44 .................................... CGTTGACTATACTATAGCATACTCGTGTCACGTTGTCAATACCA 719416 36 100.0 43 .................................... CGGGGAATTACTACTGTTTGCATCGGTTATCGACGCATACGGC 719337 36 100.0 39 .................................... CGCGATCTCCATCTGTTTGCGCCAGACCGCGAACAGGAT 719262 36 100.0 41 .................................... CGTTGAGCACGGCGCGCCTGACGATACCATGCTCTTTATTG 719185 36 100.0 45 .................................... CACTACGTATTCGAGTTGCCTAATTACAAAGTGCATTTGCGCCGC 719104 36 100.0 43 .................................... CGTACATTTCTGTTCTCCTTTCTTGTTTGGTTACTGGTTTGGC 719025 36 100.0 46 .................................... CTACGCAGTGCGCTGCACAAACTGCGCAATGAAAACGCTGCGTTGT 718943 36 100.0 46 .................................... CACTACTAAACCGTCCCGTGCTTTTCGCGCCTAACTGTTTAAACCA 718861 36 100.0 42 .................................... CGTTGCAATACGCGACAACGCAGCGCGGCGAGAAACCGTCGA 718783 36 100.0 46 .................................... CCGGGGGCCTTCTCGAAAAACCCATACGTAAGTCCCCCCCTTTAGC 718701 36 100.0 42 .................................... CTCGTCAGAAACGTTGTCACCGAAACCGATCAATTTGTGCTA 718623 36 100.0 43 .................................... CACGTACCAGTTGATCTTCTTCATAGTTAACTCCTTTCTTGTT 718544 36 100.0 43 .................................... CTCCTTCCTTTCTTTGCTGGATTTCCTTCGTTGCTCACATCAT 718465 36 100.0 45 .................................... CTTGTATTTTTATCTATTTATTCGGTGTCGTCCTCAACTCGAAAA 718384 36 100.0 40 .................................... CATGAAAGTAACTGCGCGCTTGCCGTTGCCGTCAGTGCGG 718308 36 100.0 39 .................................... CAGACGCCAACGGGTTTTGGTAATGATCGTCGGTAAAGG 718233 36 100.0 43 .................................... CGGCACGACAGAGACGCGCCATATCATCCCACGCATTTTCGCC 718154 36 100.0 46 .................................... CGCAATTTTCGAGCAATTTTTTGTCAACAGTGCGCACACTGTCTGA 718072 36 100.0 41 .................................... CACTATCGCCGTTGTCGGGCTGCGTTGCGGACGTTGGCCAG 717995 36 100.0 40 .................................... CGTACCTGCCAAGCTTTCAAGGTCGGCAAAAAGTGCTGGC 717919 36 100.0 42 .................................... CCGCACTACCATTCCCCACCTTTCTGCGTTGTTGGTTGTGTG 717841 36 100.0 42 .................................... CATTACACGTGGGCCATGGACGTAGATAACTTACGTCGGTAC 717763 36 100.0 42 .................................... CTGCGCGCCGAGAATAACGCGGCGGATGGTTTCCGGCCACGT 717685 36 100.0 44 .................................... CCTCAAACCGCCACCATTCACCGGGGAGTTCGACCCACTCCCCG 717605 36 100.0 39 .................................... CTCTCAACCTGCGTGCCTTGCTCGACCTGCGTTTGCTTC 717530 36 100.0 42 .................................... CCTCTACGCTCGGCGCGCTCGGCGGGGGCGATGGCGCGTCTG 717452 36 100.0 43 .................................... CCGGCGACGGCGCGAAACCGAAGTAAGCCGGCCTCAAAGTCAC 717373 36 100.0 41 .................................... CCAAACAGCGCTGGATTGTTATCTAAAATACGCATTTATCC 717296 36 100.0 41 .................................... CACAACAAGCGCTGCCGCGATGCCAACCGCGCCGGCTGTCG 717219 36 100.0 43 .................................... CGCACCGATACCGTCGATGTCACGATCTGTCGCTGTGACGTGG 717140 36 100.0 42 .................................... CGACCAATCCCGCTTCGCGCGTCAGCATCCATTATCTTATTG 717062 36 100.0 43 .................................... CCTAAATTGAACCTCAATCCCCGCCGCTTTCAACACCTCTTCG 716983 36 100.0 40 .................................... CTCAACGGTATTCAGGAGTGGTCGTTCACCGTCGAGACGG 716907 36 100.0 43 .................................... CGAACACTATCCGCCATTCTCGCCACCGTCGGCATTCGCGTTG 716828 36 100.0 43 .................................... CCCACTCTTCGCGTGTTGCCATAGATCGCCTCCTATGCTATAG 716749 36 100.0 45 .................................... CCGGTAAATGAGCGGCGAACGCTTAATATTGCGCTGATCCACCAA 716668 36 100.0 43 .................................... CCGAAAGATACAACAGCCAGTCGCCGTCATCGGCCTCGTCTAC 716589 36 100.0 40 .................................... CGAACGGCCCACACCGCCGCCAGCCAGCGGTTGTAATCCA 716513 36 100.0 43 .................................... CTGGCCAATACGGTAAGTGTTGAAGCCGCCGGTCATTTGGTTT 716434 36 100.0 41 .................................... CAAAGGATCAGCTAAAGATCGTTGAAGCACAGATTACTGCG 716357 36 100.0 42 .................................... CCAACCCTCGCGCGGGTCTCATCCCCGACAATGTGGTACTCG 716279 36 100.0 41 .................................... CATTGCGTCCGCAATCGCCTCCTTCCTGGTTGCGAACGGGC 716202 36 100.0 40 .................................... CATGAAAGTAACTGCGCGCTTGCCGTTGCCGTCAGTGCGG 716126 36 100.0 39 .................................... CAGACGCCAACGGGTTTTGGTAATGATCGTCGGTAAAGG 716051 36 100.0 43 .................................... CGGCACGACAGAGACGCGCCATATCATCCCACGCATTTTCGCC 715972 36 100.0 42 .................................... CATTATTTATCTTTTTATCCTTATCGCGCTTCTTTGCAGCAC 715894 36 100.0 42 .................................... CAGAGTTATATCAACAACTCGAATTGATGAGTAAGCGCGTAT 715816 36 100.0 42 .................................... CGAGTTCATCTGGGTGGTCCGTGAGGGCCACAATAAATGGGT 715738 36 100.0 45 .................................... CTCAAAACCTGTGCAGTCGCCGGCTGGCATTTCCCGATTGCGCGA 715657 36 100.0 43 .................................... CTCCACGTTGTCAACTGGACCTGGATGCACGGAGAGAACACCG 715578 36 100.0 43 .................................... CCCGCCCAACAGATGAATCGGGCGTTGTTGCGCAAGAACTTCG 715499 36 100.0 40 .................................... CTCTGCTTGCAATCGCGCCATTCGCTCAGCTTCTGCTTGC 715423 36 100.0 43 .................................... CAAAATGTCAGGGCTTTTTTTCTAGGAAAAACACCGGTTATTC 715344 36 100.0 47 .................................... CTTGCATATATGCAATTGCCGGCGTACACGAACAATCTTATTCTTGG 715261 36 100.0 45 .................................... CCGAAAAGCGAAGGTTGTCAGGATCGTTGCCCAACCCGACAACTT 715180 36 100.0 41 .................................... CCTGCTCTATATCGCGATTATTGTATTTTCCAATATTAGCG 715103 36 100.0 43 .................................... CGTAACTACTTCCGTTTGTTGTTTTCGCGCCTCTGCTAATTGT 715024 36 100.0 43 .................................... CTTACTATCTGCGCGTCATTACGCCGACCGGCGACTACTATTA 714945 36 100.0 42 .................................... CGTCAACAATGCCGCGATCATTCGCCGCCACCGCCGTAATCG 714867 36 100.0 42 .................................... CTCGGTGACGGTCATACCAAATGCAGATGCGCAATACGTGAC 714789 36 100.0 42 .................................... CCCGCAAATAGCGTAGTATGATAGAGACGTAACGGTAATTCA 714711 36 100.0 43 .................................... CAAATCTGATCTTGTTCGCTGCCTTCTTCCGCGCAGACAATCT 714632 36 100.0 42 .................................... CAAATCCGGAGTCGTCTTCATTCGTCCACCGGGACCAATTAA 714554 36 100.0 46 .................................... CCGGTTGGTGCAACAGCGCAACCGCCGGAATGAGATATTGTTGCAA 714472 36 100.0 41 .................................... CTAAAATCGCCGTACAGGTTAACAAGGTACATTTTTTCCTC 714395 36 100.0 45 .................................... CCAAGCGGCACTGCGGCGCATCTGGTGATGCGTGAGCAGATCGGC 714314 36 100.0 41 .................................... CGTGAATGACAATCAAGCCCTCGCTAGTCTGGATAATCTGG 714237 36 100.0 38 .................................... CTAAATATTTCGGTTCCTCATTCGCGATACTTCTCCCG 714163 36 100.0 40 .................................... CGTTAAAGCGGGTTGATTTTGATACACAGGTGAAAATTAT 714087 36 100.0 45 .................................... CAACTTATGCTTCATCCAACCACGAATGTGCTTCGCAGCATCCAC 714006 36 100.0 41 .................................... CTGAAATTGTGACAAATGACCAACGACAAATGTTTCGCCAA 713929 36 100.0 42 .................................... CCTCTGCGAGTGTGCCCGAGCGGCGGAACGGTTGCCAACCCG 713851 36 100.0 45 .................................... CCACCTGCTGTTATTCAGCCGCCGGCTCTGACGGTATCGGGATGG 713770 36 100.0 42 .................................... CTTAACTCCTTTTTTTGTTTGATTGCTTCTTACGTCTATACT 713692 36 100.0 42 .................................... CACCTTCCGGCAGCCGTACCTTCGACGGCTTGCCGGCCCAGA 713614 36 100.0 41 .................................... CGCGGCTTGCAAGGCCGTCAGTGCCTCCCGCTCCTCCTTTT 713537 36 97.2 43 ...............................C.... CAAGAACGGTCGGAAAAACGCGACCGCCGCCTCGTCTGTGTTT 713458 36 100.0 44 .................................... CCAGCAACGTTCCTCGACCAACTCTTCCGCCACTGCAAGCGCAA 713378 36 100.0 41 .................................... CATGACGGCGGTACTTACTCTTTACTGGCAGGTGCGGGTAC 713301 36 100.0 40 .................................... CGCAATTCCCGCAATGCGGGGAATTGCTTGAGTTGCATAA 713225 36 100.0 43 .................................... CTTCTCCCACGTCCTGCCGCGTTACCCACTCATCACCCAAGCG 713146 36 100.0 40 .................................... CCGACGGTGCAAACGGATTAGGTAGCTGGAACGGCAACGA 713070 36 100.0 41 .................................... CAGATCGAAGCGCCAGCTCAGTGCTGCCATCGCGACAGTGA 712993 36 100.0 40 .................................... CGCAGCGATCAGCGCGGCCAGCGCTGACAATTCCTCGTCT 712917 36 100.0 38 .................................... CGCAACGCGATTGATTTCCCCGAGCCGCGCGGTGGTTG 712843 36 100.0 38 .................................... CCGAGCATTGCGCGACAGAAAAACCGATTCCGCGATTC 712769 36 100.0 42 .................................... CTCAAAAATGTCGAACAAGGCAAGCGGGTTACCGGTCTTTCT 712691 36 100.0 38 .................................... CATACGCGATGACGAGGCGCCATGGGCGCGCGAAGCAG 712617 36 100.0 41 .................................... CATAATGCGCAAGACTTGTAATGTGGCGTGCCAACCATGCA 712540 36 100.0 42 .................................... CCGAAGATGTCTGGTACGTCTTCGTCGACAGTAACTCGTGAC 712462 36 100.0 42 .................................... CGCCAATACTCCGACCACCGCCTGCCGCACAGCTTTGTCGGA 712384 35 97.2 42 ....................-............... CCCACAGCACTGGCGAGAGCGGTCGCCACCCCCGCCGTGCAC 712307 36 100.0 42 .................................... CCCATGCTTGCAAAGACGGCGTGTTCACACGACATTGGAACC 712229 36 100.0 39 .................................... CATATAGTTTGTTTTCCCCAAGAGTGGGGCGCGATCCGG 712154 36 100.0 42 .................................... CCCATGATCGCCCCTGACGTTGGTGGTCGACATCAACGACCG 712076 36 100.0 38 .................................... CGTAGTTAAGAATGCTACTCCCAACACTACGCAACAAC 712002 36 100.0 42 .................................... CGCGACGAGCCATGGCGCTCATGACGCGAAAGGGTTTGATTC 711924 36 100.0 42 .................................... CCCGGGATCGTGGTGGATCAGACGCAGAATGTAGCGCTCGTG 711846 36 100.0 41 .................................... CCCGCCGATCCCGCCGCCGCTTCCGGCGCGGCGGACAACGG 711769 36 100.0 39 .................................... CTGACGCCGCCGGTCAAGCCGGCCTGGTGCGCCGATTGC 711694 36 100.0 41 .................................... CTCGTTTACGTAAGTCTGTTTTTCGCTGTTCAATCTTCCAA 711617 36 100.0 41 .................................... CCGAGCCGGTTTGCGGCTTTTCGCAACAATACCATACCTAC 711540 36 100.0 45 .................................... CCTAGCAGCGGCTGGCCAAACGGTGATCTGAGAAACTGGCCAACT 711459 36 100.0 43 .................................... CCGAGTAAACAACCGAACCGCTTGCGGAGCAAAACCTCTGCCG 711380 36 100.0 45 .................................... CCGGAGGGGTGACCGGAATCAGGTACTGGCGTCCGTTAACCGTGA 711299 36 100.0 41 .................................... CTGAACATTGTCGCTGATGTCCAGCGCGGATAGAAGGTCGT 711222 36 100.0 45 .................................... CGGAAAGTGATGCGCGAGGTGTTTGAGGTCAAAACTGACGTTCTG 711141 36 100.0 42 .................................... CGGATCGAGCTGGTCAACCGTAATACCGGCACCGACCCCTAC 711063 36 97.2 42 ................C................... CCAAGGCGAACCCCCGACGTGACGACCCGCCACCGTCCGTCC 710985 36 100.0 38 .................................... CCCGGAAAAACTTGATTGACATTCTCGTACTCCGTAAC 710911 36 100.0 46 .................................... CTCATATATTCTGCCGCGCCGGCCTCCATCAAACGAGTAATTTCTG 710829 36 100.0 42 .................................... CATCCAAATTGCCGACGTTCCTCTGCGCGGGTTGGGTGGTCT 710751 36 100.0 40 .................................... CCAGAAGTTCGCTTCCACCGCAAAAGACAGCGCGTTCTAA 710675 36 100.0 41 .................................... CCCATATTTACGTCGCAGGATTGCTTCTGCCGTTTTCAGAA 710598 36 100.0 45 .................................... CGACGCTGTGTGCCAACTATTCGCGATTGGCGCCACTAATTCTTG 710517 36 100.0 39 .................................... CTTATCGCCAGAGCCAGACCCCAAGGCGATAGTACGTTT 710442 36 100.0 42 .................................... CCGAAAATACTACGAGTTCCCAAACTGCGCCGTCGGCACTGA 710364 36 100.0 41 .................................... CCGATCGAGGAACTGGATTATATGCCAATCTTGGTAGACGC 710287 36 100.0 42 .................................... CAAAGCGATCAATCTGATTCTTGACGCCAACGCCGCCTATGT 710209 36 100.0 40 .................................... CATCAACGCGGGAGCAATTTATCGGGCGGCGCAATATCGT 710133 36 100.0 42 .................................... CTTAAAAACCAATATCGAAACAGCGCGTAGTCTTGCCAGTCT 710055 36 100.0 41 .................................... CTCTTTGGCCTGGGAGTTCACCGATCCGCTGGCCGGCCAGG 709978 36 100.0 41 .................................... CCTATTAGAAAGCGAAACTTGAACACCTCCTCCTTCTCTTC 709901 36 100.0 44 .................................... CACAGTGCAGTCGTGATCTGAGTGATCCACTCCGCAAGGTTTGC 709821 36 100.0 45 .................................... CCGATGTCGGTCTTGATCCAGGTTGCCATTGGTGTACTCCTTTCT 709740 36 100.0 42 .................................... CTGGCCAACGCCGCAGCTGCGCATTCCTCGTCAGTCTGCGGA 709662 36 100.0 63 .................................... CTCCCGCGAGGGGATTGAAACACGAAACAGAACGGCAGTGTCAGCCACCAATTCTCAAGACAA 709563 36 88.9 0 .........C....C......T..C........... | ========== ====== ====== ====== ==================================== =============================================================== ================== 277 36 99.9 42 CTTCAAAAAACCAAAATCCCCGCGAGGGGATTGAAA # Left flank : CGCATGCAGGAGATACCTGGTGACACGGTAGCGGTGGCCGTCGTTGACCAGGGGTACACCGGTGCGCAACCGGCAGCCGAGGCCGCCGCCCACGGCAGTCGCCTGGCGGTGGTCACGCTGCCGACCGCCACGCGCGGCGTTGGCGTGCTGCCGCGGCGCTGGGTGGTCGAGCGCAGGTTCGCCTGGATGACGCGCTTCCGTCGCTTGGTGCGTGACGACGACCGTGTGGCGGCGACGCTGGCCGGCTTGCATGTCGTTGCTGTTGCCATCGTGGTGGCCCATCGGTTTGTCTCGCTCATGGTTCAACGTTCATAACAGGCTCTAAGCGTCGTCCGGGCAAACATCTACCCCTGAATGGCGCGGGATCGGATTGCAATGAGCAAAAACAGTACTCGTTTCTCTCCAGATGGCGTAAAAGACTTTACACAATACGGCAAAATCACCCCTGCCGCGCAAATTGCAGTAGCGAGCGCATTGCAAAGCGGCGGCAGGGGTGGTAT # Right flank : TGTGTACACGGTTGCTTGCCGGTCATCGTCGTTGGTGACAATTCCAAAAAACCATAATCCTCGCCAAAGGCGCAAACTCTATCTAATCGTGTAATCAAAACCTCCACAAGATCACAGACGGGGCAGGTTTTGTGCCTGCCCCGTCTTGGTGTTCATGTAATCTGTCACCGCACAGGGTATACGTGTCGTATCTCGCCCCTCCAGCGCAGTGGCTTCGCAATGCCCTTCACCGCTGGCCGTTGCACGTCTCCGGTGCCCATAGCCCGCGCTGGGCGTTGCGGGCTTCCGCTTCGGCGGCCCGGAAGATCGCTTGATAGCGGTATGGCACGTCGTAGGTGTATTCGTAGGCGTACCCTTGTCGAATCTGTTCCAGATTGACCATGCGTCCGTCTTCGAGCCAGACGTAGCGCAGGAGGCGGCCAAACCGATCTCGTGAGTCTTGTGAGGGGTCGTCTTCTAGCAGGACGGTTTGTCTGTCTACGAGTTTGCGCGCATTGCTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAAAAAACCAAAATCCCCGCGAGGGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.20,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 2 3962639-3975981 **** Predicted by CRISPRDetect 2.4 *** >NC_010175.1 Chloroflexus aurantiacus J-10-fl, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 3962639 37 100.0 36 ..................................... TGCCACCGGCCCCGGCCGGCGTAGGCGACGGAGTAG 3962712 37 100.0 39 ..................................... CGTTGACGTGGTCGTCGAGCTGGTTCCACGGGTGCGGGA 3962788 37 100.0 36 ..................................... TGGAGCGATGACGCAGATGACGCAGGCGGCAGCGGC 3962861 37 100.0 37 ..................................... CGCGGCTAATTTCGCGCAACAAAATTGCGCGTGTTTG 3962935 37 100.0 37 ..................................... TGTAATGTTGTGTCCAGTTCGACCGACATACCAGCGC 3963009 37 100.0 37 ..................................... ACGCAATCAGCCGCGATAGCTGGCTATGGTCGGCGGA 3963083 37 100.0 36 ..................................... TGCGTTTGCTGGCACGCGCCGCACTTGATGGTCAGC 3963156 37 100.0 35 ..................................... CATACGGAGCCTGATCAAACCCATGCTCCGAATGT 3963228 37 100.0 37 ..................................... ACGACTTCGTGCGCATTGCCACCGACCTACACAACAC 3963302 37 100.0 38 ..................................... GTTCTTTTCGCGTTCCGGGAGTTGTTTATAAAACGTAG 3963377 37 100.0 36 ..................................... ATAATAGGCCGCCGAGTGTTGATCAAGAAAAAAATG 3963450 37 100.0 38 ..................................... TACATCATTTCCCTCGCGGCGTTGCACCTCTGCTGGCG 3963525 37 100.0 35 ..................................... CATACGGAGCCTGATCAAACCCATGCTCCGAATGT 3963597 37 100.0 37 ..................................... ACGACTTCGTGCGCATTGCCACCGACCTACACAACAC 3963671 37 100.0 37 ..................................... TCGTCACGTTTGCGACTGTACGTGCGGTAGAATACCA 3963745 37 100.0 37 ..................................... TCAAAAATTCCGCATCGTCGGCGTACCCAAGCGCAAT 3963819 37 100.0 36 ..................................... AAGCGCAATCTCCGCCGAGCGACGAACATTGCCTGA 3963892 37 100.0 36 ..................................... GTGTGTTATCTGGCCGGATTGACGTTCTGGCCACCA 3963965 37 100.0 37 ..................................... ACGGCGCCGAGAACGGCGTTAAGGAAATACTGGCCGG 3964039 37 100.0 36 ..................................... CACAACTGGTTGTAGTGTACTCGATGAAACAGGCGT 3964112 37 100.0 39 ..................................... ATCATTCGCTCTCTGGACGGGAACGGTCCGAACCATTCA 3964188 37 100.0 36 ..................................... CGAACGCTCACAGCAGTGGGTGAAAACGGCAACGGA 3964261 37 100.0 35 ..................................... GTTTGCTCGGCAATGGCGGTTAATTGCGGTTCGTA 3964333 37 100.0 35 ..................................... ATCTAACGTCACCACCGGCCTGGTCTCACAAGACC 3964405 37 100.0 36 ..................................... CTCTGTCTTGCGACGGGGATCAGGGCGGAGGCAGCG 3964478 37 100.0 36 ..................................... TCGGTCACGAACTGCTTTTGGACGGGGGAAGAAGAC 3964551 37 100.0 37 ..................................... CATTCGCCGTAAGGATTAGCAGCTCCTTAGTTTGCGG 3964625 37 100.0 38 ..................................... CATACCTGTGCTACGGATTGTCGGCGTATCTTTTTCTG 3964700 37 100.0 40 ..................................... GCCCCGGCCGGCGTAGGCGACGGAGTAGGGGTAGCGGTAG 3964777 37 100.0 37 ..................................... TGCTTTTCGTTGCCTCGCTGGTCGGGAAGCTCAGCGG 3964851 37 100.0 37 ..................................... GCGTTTTGCGGCGATGTCGGCACTACTGCCGCCGGCT 3964925 37 100.0 37 ..................................... ACGGTGAGCGGGTGCGCTCGGCGCGCTGGCTCGGCGC 3964999 37 100.0 36 ..................................... TGCCGAGCGCTTGCGCACGGACGATGTGATCCTCAC 3965072 37 100.0 37 ..................................... CGCTGCTGCTCGCAGCGTTGCGCGCATCTGCTGCATC 3965146 37 100.0 37 ..................................... TCTGCTTCCAGTTGTCGATAATTTGCTGCGCCTGCTC 3965220 37 100.0 35 ..................................... GCGTTTGAGCTTGAGCTTGACGAGACTGACGGCGA 3965292 37 100.0 38 ..................................... GCAAGAGTTTGTCAAGGGGTATTTTGAGAGATTTTCAG 3965367 37 100.0 38 ..................................... GGCAAGTGAGCTGGGCCGGCTCAAGCTTACGCAGCAGT 3965442 37 100.0 37 ..................................... ACCATCGTGCGCTACGCGACGGCCAGCGATGCGGTGC 3965516 37 100.0 37 ..................................... AGCGGTTTACCGCAGACGACATCGAGCGGCGGTACGG 3965590 37 100.0 39 ..................................... GTGTATCACTTGCAGCCGCCGCCTCTACAAGCGGCAACC 3965666 37 100.0 36 ..................................... TGACGTAATGTGGTCGTAATATGACGTTGACGTAAT 3965739 37 100.0 35 ..................................... ACTAATGTCGTTCAGCACGTGCTCATTCGCACACA 3965811 37 100.0 36 ..................................... AGCAGACGGAGCAGCGACGCGACATAATCAACATCG 3965884 37 100.0 37 ..................................... CGCGGCAAGGCCGGCCTGTAGCGTCTGCCCGACCGTG 3965958 37 100.0 36 ..................................... ACGGTGCAAAGTGGTGATCAAACAGTCGCCGGTTGG 3966031 37 100.0 37 ..................................... GTTCGTACCGAATAAGGCGGCACAATGATGTAGTTAT 3966105 37 100.0 37 ..................................... CCGAACGGCTACTGGCCAACATCCGCGAAGAGTTAGA 3966179 37 100.0 37 ..................................... TCCAGTTTTATGGGTTCGCGCGCGTATGGATTGCTTC 3966253 37 100.0 37 ..................................... GTAATGGTTTGGTAACGGGAGCGGATGTTGAAATCGC 3966327 37 100.0 36 ..................................... GTTTTTCGCACGCGCTACACGTCACTTCGATCATAA 3966400 37 100.0 37 ..................................... GTCCGGGCGGGGAGTTGCGCGTGCAGTCGCAGTTTAT 3966474 37 100.0 37 ..................................... GAGACAGTATGAGCGTCGAATGGATGGTTACAGTCAT 3966548 37 100.0 36 ..................................... TTGCTTTTGCTAAGAACCTTTTTCCAACGGCGACGG 3966621 37 100.0 35 ..................................... ACTAATGTCGTTCAGCACGTGCTCATTCGCACACA 3966693 37 100.0 39 ..................................... TACTCATGTGCGGGTCATTCTGGTAATACCATCGACATG 3966769 37 100.0 39 ..................................... GGCGCTGGCGCTGGCGTTGGCGCTGGCGTTGGCGTTCTT 3966845 37 100.0 38 ..................................... ACAGTGTTGCCGTTATCGCGCTACGTCAGGGCTGTTGA 3966920 37 100.0 38 ..................................... ACAGTGTTGCCGTTATCGCGCTACGTCAGGGCTGTTGA 3966995 37 100.0 34 ..................................... AGATGCCAGTCAAGATGATAGCTGCTGCGTTCAC 3967066 37 100.0 38 ..................................... GGTGCTTAATCCGCGCTGCGAGCAGCAGCGTTGCGCGC 3967141 37 100.0 39 ..................................... GGTTAGTTAGGAAGGAATGATACTATGCAACTGTCTCGT 3967217 37 100.0 39 ..................................... GAGTATTTCAACCGTATACATGTTAATCTCTTAATATCT 3967293 37 100.0 36 ..................................... GTACACCGCCTGCGGCGAGAGGCCGGCCAGCAGCCT 3967366 37 100.0 37 ..................................... TGTGATTGGTCACAATGTTAAACACCGCATTCTCGTT 3967440 37 100.0 37 ..................................... GCGGTGTGGCGTGATGCTCTTCCGGTATGCGCCCGTT 3967514 37 100.0 35 ..................................... ACGTATCACCCGCCGCGCTCTGCACCATTTGTGCG 3967586 37 100.0 38 ..................................... GTGTCGAAGCAATCGAGCAGAACGAAGTGATGTATGGC 3967661 37 100.0 39 ..................................... GGGATGACTTTGTTACATTAAACCCTGGCTATTACCTTT 3967737 37 100.0 36 ..................................... CTCACTACACTGTGGTGATGAGGCTTTTGTTTTTTG 3967810 37 100.0 35 ..................................... ACTCCACTGCCTAGCCCTACCCCGGCGCCTACCGT 3967882 37 100.0 35 ..................................... TTCCTTACATATCTTTTTGGACCGAATACTTCAAA 3967954 37 100.0 35 ..................................... TAAAGATTAATAGTATGAAAAGGCCTGCCAATAGC 3968026 37 100.0 36 ..................................... GTGCTAAAATACAATCGCTTAATCGTTTAACTTGAA 3968099 37 100.0 36 ..................................... TCGAAGGTGTCAATTTTACGGGAACAATCGAAATAA 3968172 37 100.0 36 ..................................... TATATACTATCCCTACGGGGAGTGGTATGGATACTA 3968245 37 100.0 37 ..................................... CTCACTACACTGTGGTGATGAGGCTTTTGTTTTTTGT 3968319 37 100.0 36 ..................................... TTATATTGCAGCGTACTGCCTGAGTGATGCACGGAT 3968392 37 100.0 37 ..................................... GGTCGATGCGTTGCGGGCAATCGCGCTTGATGAGCAG 3968466 37 100.0 36 ..................................... TTCGGCAGAGGGCAGGGTCACGTCGGGATGCTGGAC 3968539 37 100.0 36 ..................................... ATCGAATTCGAATCTCATTGCTTCTCTCGACTACCG 3968612 37 100.0 35 ..................................... GCCAGCGTCTGCGCGATCTCCTCGACCAGCTCCTC 3968684 37 100.0 41 ..................................... CTGAGATGCCGGACCGCGCGGCTCAGATTGCTGCGTTTTTG 3968762 37 100.0 35 ..................................... CGTCGACGTGGTCGTCGAGCTGGTGCCGCGATTGC 3968834 37 100.0 35 ..................................... CCTGAGTCGTGCGCGTTCGGCTGGCGCGAGTTTGC 3968906 37 100.0 37 ..................................... ATAACGGTTGCTGCGACACGGGAGGGCGAGCTAATGC 3968980 37 100.0 40 ..................................... CGCGGATGCCCTCGGCATGGCGCTTGCTGCCGAGCGCCGC 3969057 37 100.0 36 ..................................... AGGCGTTGCAGCGGTTGGTGGCTGGCGGCATCCTGA 3969130 37 100.0 36 ..................................... ACGTTGTGCGTGCAGTCGCGGCGAGGGGTGCATCTG 3969203 37 100.0 35 ..................................... CTCCAACGCATCGGTATACCAGCGATCATACCGCT 3969275 37 100.0 37 ..................................... GTCCGGGCGGGGAGTTGCGCGTGCAGTCGCAGTTTAT 3969349 37 100.0 36 ..................................... CGTGCGTCCATCACGCTATTACGGCTGGTACGATAC 3969422 37 100.0 38 ..................................... TCGATTGCAACAGGGTAAGCGCTGCCGTCACCCCTGCG 3969497 37 100.0 39 ..................................... AGTTTCTGCTGCCGCTCCTCTTCATGCTTGGCGTGCTCC 3969573 37 100.0 36 ..................................... CCGTGCTCAATGACCGGCAAACGGCGCAATGGGAGC 3969646 37 100.0 35 ..................................... CGCAGCCATGACCGACCGAAAGGTGGCGGATGATG 3969718 37 100.0 40 ..................................... TCTCATTATCTTCTTTTTTTCCCCTATCTCTCATCATCCC 3969795 37 100.0 37 ..................................... ACGGTAACGTTGCTACGCGCAAGTGTGTGGTGTACAC 3969869 37 100.0 36 ..................................... AACATTGTTGCAGGTTTTGCTCTGGCAAGCGATCAA 3969942 37 100.0 37 ..................................... ATAAACGGTGACGTTGTTCATGGTCTTATCCTTTCTT 3970016 37 100.0 35 ..................................... GAAGATAAAAAAAAAGAGGAGGGGGAGTGATCCCC 3970088 37 100.0 36 ..................................... TGCGTTATAGCGCGCGCGCAGGGCCGGCACGGTCAG 3970161 37 100.0 37 ..................................... TCGTGATTGTCGCTGTGTCATACCAATTCCTTGCTAC 3970235 37 100.0 38 ..................................... GCTAACGCGGGTTTACTATAGCGCGGTTATCTGGCGTT 3970310 37 100.0 39 ..................................... TCGGCGCGAAGACGTGTTACATCGCCGGTGTACCACCGG 3970386 37 100.0 37 ..................................... CTTTTTTCACCCCCCGCTCTCTTCATCTTGTTTTCGT 3970460 37 100.0 37 ..................................... TGCTCGTTCATCGCGTACAGCTCAACGAGTACACCGC 3970534 37 100.0 35 ..................................... TCGAAAACGCCTCGACGATAGTGCTCGAGAAAGAC 3970606 37 100.0 36 ..................................... AGTACTGTAGTCGTGTTGAGGTTGCACTCATTACAT 3970679 37 100.0 35 ..................................... AAGCCGGCGCTGCCGGCTACGCGGCCATGGGCACA 3970751 37 100.0 38 ..................................... TGGTGATGTTACATCACGCATCGCCCGCGCCGAGGCCG 3970826 37 100.0 36 ..................................... CGTCTCGATAAGGCCGCGCTTGAAGCGACCCCAGCC 3970899 37 100.0 36 ..................................... CGTGGACATCACGAGGCCAAGTTATGTTTACAACGC 3970972 37 100.0 38 ..................................... GCGGTAATGTCAAGGCGGCTTATGTGCTTAATTTTTGG 3971047 37 100.0 35 ..................................... TTTTTCGAGCAATTTTCGAGCGCGCACTTGTCTGC 3971119 37 100.0 35 ..................................... TGCCGATATTCTCGGCGAGGACTGGTCCTTCCCGG 3971191 37 100.0 37 ..................................... CTGTTTGGCAATCGTCGCGCGATTGGTGCGCCAGCGG 3971265 37 100.0 36 ..................................... ACGCGCTACACGTGATTGAGTCGCTCAATACGACCA 3971338 37 100.0 38 ..................................... ATGACGGCGTACTCGATCCGGCGACGTAGGAGGGCGCA 3971413 37 100.0 38 ..................................... AGACAACGCAAGCAGTGCGCTGCGTAACGTGCAGCGCG 3971488 37 100.0 35 ..................................... CTCTGGAAAGAGATCGTTGCGACAGCACAAGCGTT 3971560 37 100.0 36 ..................................... TCGTGAACTCGCATAGTGCTTCCTTCAGGTCCGGGA 3971633 37 100.0 36 ..................................... TTGCCCAACAGATAAATGCAGCAAAGATGTGATCGT 3971706 37 100.0 36 ..................................... ATCGGGAGCGGCAAGCTGTGCGTGACGCGGTGCCAA 3971779 37 100.0 36 ..................................... TCGGGTTGTCGATCAACATACCGTACTGCTGCCAAG 3971852 37 100.0 35 ..................................... TGTCGCCGCCGGGAAGCCTGATCCGGTACGCCCAG 3971924 37 100.0 37 ..................................... GGGGGCGGCACTGGCGGAGCTGTCAAGGCTGCGCTAC 3971998 37 100.0 37 ..................................... ATCGCAATGCTCTTTTCGATGCTCGCGTTGTTCGCGT 3972072 37 100.0 35 ..................................... TCTTTACATGCACTTCAGGGATGGCCGTTTGAACG 3972144 37 100.0 36 ..................................... CGTGACACATCACCACGTGACACATCGCAACTTGAC 3972217 37 100.0 35 ..................................... TAAACACGCGGGAGGTGAATAGCAACTGCGTGTGA 3972289 37 100.0 39 ..................................... TCGTCTCCGCTGTCGCTGTCGCTGCTGTCGTTGTCGCCG 3972365 37 100.0 36 ..................................... ATTGACAAGCGACTGTCGCTGCTGCGCGTGCGTCGT 3972438 37 100.0 39 ..................................... CTGCAGCAGTCGCGTAGTAACTGCTACTACGAGCAGTGA 3972514 37 100.0 35 ..................................... GAGATCGACCCGGCTGGGGTCTCACAGGCGTTCAC 3972586 37 100.0 37 ..................................... TGGGGCGATGACGCAGACGGCAGCGGCAACGATGCTG 3972660 37 100.0 36 ..................................... TTGTACGACGCCTCCTGACGTGCGATTTATATATTG 3972733 37 100.0 38 ..................................... GAGGACGTCGAGAGTGGAATTGGGGTTCTCATCAACCT 3972808 37 100.0 37 ..................................... TTATATTTGGGTAATATGCCCAGTTCTTACACACAAT 3972882 37 100.0 37 ..................................... GAGACGTTTGAGCAAGATGGTAACGATTTGATATTTC 3972956 37 100.0 38 ..................................... GTTCACTAATCGTTACCGTTGGCATTTAGCACTCCCCT 3973031 37 100.0 35 ..................................... TGGATTATCGGCGCGGGTGTGGCCAACCATAATCA 3973103 37 100.0 37 ..................................... GGCAAAACGTATCGCGGTCGGAGCGGATACTTTCACT 3973177 37 100.0 36 ..................................... CGTAGATCAATAACCGTACCCTGTGTGTCAAGATAC 3973250 37 100.0 35 ..................................... CCTCTCGCGCGGTGATGGCTCGTTTACGCAGATAG 3973322 37 100.0 38 ..................................... CGGATGATAGCGATATTGAGGCGTTAAAGGCAGAGTTG 3973397 37 100.0 37 ..................................... GCGCTCGATAGCGCGGCGAAGGCTAACGGCGAAGTCG 3973471 37 100.0 35 ..................................... GTACTCGTTGTAACTAGACGCCGAAAGCAACCAAA 3973543 37 100.0 35 ..................................... TACACACACGAAGGCGTCATCAACGCAGTGAGGTT 3973615 37 100.0 37 ..................................... GGATTAAGTCACCGATTGGCTACGAGATCATCAACCT 3973689 37 100.0 34 ..................................... CGAAAAACGTTCCACATCGAGGAACCTTTGCCGT 3973760 37 100.0 35 ..................................... CTCGCAGCAATTTTGAACCGTCCGGCGCAGTTTCA 3973832 37 100.0 36 ..................................... CATCCCAATTATAATGGAGTCGGGATCACCCACAGG 3973905 37 100.0 37 ..................................... CAAATGGAATAATGCCCTATCCGCATACTCGTTGCGG 3973979 37 100.0 35 ..................................... TTCTACTGTCGTCATAACGAACACAAGTCAATCGA 3974051 37 100.0 36 ..................................... CGTACGCGGAGGAAATACCGCTGGCAACATCGCTCA 3974124 37 100.0 37 ..................................... TCGCTGTGGATGTCGGGGTTGGTGTCGGGAGCGATGT 3974198 37 100.0 39 ..................................... TTGACCAGAATAGGCCTGGCACTCGGCAAAGGAAGGTGA 3974274 37 100.0 38 ..................................... GCTTTGTCACCGAGCGCCGGATCGTCGAAGATACGCGC 3974349 37 100.0 38 ..................................... AACGCTCTCTAAGCGTGTGTTTAGGAGCGGAACGTCGA 3974424 37 100.0 36 ..................................... CGCGATGCGTATATCGACATTCCGCGACGCGGTTCG 3974497 37 100.0 37 ..................................... TCACTCATCTTTGCGACAGGGTACGAACGTGATAGCC 3974571 37 100.0 36 ..................................... ATTGTACCCGTAGGCGGATCGGGAGGGATAAACCGA 3974644 37 100.0 36 ..................................... CTACAGGCTTGATTATCCGGCAGATTTTGGGGTTGA 3974717 37 100.0 36 ..................................... GGGACTACTGCCGGCGCGAACGATACAATCCTATTG 3974790 37 100.0 36 ..................................... CTTTCGTTGCCAGCAGCAACGCGCCGTAAACGCCGA 3974863 37 100.0 36 ..................................... CTTTCGTTGCCAGCAGCAACGCGCCGTAAACGCCGA 3974936 37 100.0 35 ..................................... TCGATCGCAAGCGTTCCGTCTTCAATCTCCGTCAC 3975008 37 100.0 37 ..................................... GCGCGAACGAGCGGGTCGGGACATCGCTGAATCCCCG 3975082 37 100.0 35 ..................................... GGTAAGCTTGCCCGCCAGCCCTTTGTCGTCTTCTC 3975154 37 100.0 36 ..................................... GCTGTCGGGCAGCGAGGCAATGGTTCGTTCCACCAG 3975227 37 100.0 36 ..................................... ACTTGTCAAGAGGGAAATCTGAGAAATCTTGATGAA 3975300 37 100.0 35 ..................................... GCCATCAGAAAGGTATACAACTCGGTTAAGAATGG 3975372 37 100.0 37 ..................................... GTCGGGCGATCCAGCACTGCTGCAAATCTTTCGCTCT 3975446 37 100.0 36 ..................................... AGCTGTTTTAGAACGGTAGGTCTTCATTATTCTCCA 3975519 37 100.0 36 ..................................... CGTTTTGAAGGAAGCTGAGGCAATTTTGAATCACAA 3975592 37 100.0 38 ..................................... GCTTTGTCACCGAGCGCCGGATCGTCGAAGATACGCGC 3975667 37 100.0 36 ..................................... CTTCTTCTTCGTCTAGCTCTTCGTCTTCCCCATCTC 3975740 37 100.0 37 ..................................... TCGCTCGTCTCCCACTCTCCGCACTCTAACCCTTCCG 3975814 37 100.0 35 ..................................... CGCTTGCTCGCGGATGGGTATGTAACACTTCACGT 3975886 37 100.0 23 ..................................... GTAGAAGGGGAGTGGGGAATAGG Deletion [3975946] 3975946 36 78.4 0 T..........A......-T.C...A.A.C....... | ========== ====== ====== ====== ===================================== ========================================= ================== 182 37 99.9 37 CTTTCAACAATTTCGGCTCACGGTAGAGCACTGAAAC # Left flank : AAACCGGATGGATATACCACATTCCATTACGGAAAGCGGAAAAAGTCCCAATCAGCCCCCAATTACGCAAAAACGTAATCGAAACGATTGCTGCGGTGCAAAAAGCCATTCGGACTGAAGCGCTACCACCGCCACCGTCGAGCCGGGCACTCTGCGTCAACTGCGAGTTTCGCCGCTTCTGCAACGACGTCGTATAGATCGACCCTGAGAATAGTCATATACGTAGTCGATTCGCAACTGAGTACCGAAAGCCGTCATCAACAGCGTATTGGTACTCAGTTGCTCTACGTCCAATGAGTAGATAACGCATCAGAGACAGATCGATGCACTTCGCAACCCGGACGAGATTCTGAACAAACCTGGAGTTGCGAACACAACCCCAAACAAACCCTTGCACAACCGGCCAGGACAGATATAATGAACGTATAGGAAGGCTCCAGAGATGCTTACAACGACCAACGAGAGTGATCACAGCGCATGGGTAGGAATAGAGAGGTTGG # Right flank : CCGCTATTATTCCCTACTCCCTATTTCCTATTTTCTATTCCCTATTTCCTATTCCCCATTCCCCCTTCCCCACTCAGGAGCGCACCGAAACCACTCCCCTACCAGAATGTGCTATCATTACGCGAGCATGATCGTGCCGCGTTTGCTGTAAGGTGTTCTGCGATAATTCCCATGGCTACTATTGAGTTGCACGCCTGGTATCGACAGTATCGTAAGCTGAAGGAGGAGGCCGCTGATGCGATCCTTCTTTTTCGGTTTGGTGATTTTTATGAGACGTTTGATGATGATGCGAAGTTGATTGCTGAATTACTTGACATAACGCTGACGCGCAAGGAGTATGCGGTTGATAAGCGTTTGCCCAAGGATCAGCAGAAGTTGTATGCGCCCATGGCCGGGATGCCTTATCACGCTGTGGATCGCTATGTTTCTGAGTTGATCGCGCGCGGGTATCGGGTCGCTATCGCTGAGCAGTTGAGTGAGACTGAGGCGATGCGTAATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAACAATTTCGGCTCACGGTAGAGCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.40,-5.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 3 4533814-4540010 **** Predicted by CRISPRDetect 2.4 *** >NC_010175.1 Chloroflexus aurantiacus J-10-fl, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 4533814 37 100.0 38 ..................................... AGGTTCAAAGATTAGTTCTCGGCGGATCGGTAATCCGT 4533889 37 100.0 38 ..................................... TCTCACTTTCTAGCGTAGCTAAAACTTGCCTGTACGAA 4533964 37 100.0 37 ..................................... GTAAACGCCGAAGTCGCCCACGTTCTCGGGCATACGA 4534038 37 100.0 36 ..................................... GCGTGTGTGTGGTGTTACTCAGCCGGCTGGCCGTTG 4534111 37 100.0 38 ..................................... GTAACACCACACACACGCCCGGATCGTGACGCGCCATC 4534186 37 100.0 37 ..................................... TTGAGCGCGGGCTCGCGTCTACCGCGTCAGCCGCCTC 4534260 37 100.0 35 ..................................... CACGCAGCGTGACGGTGGCGATCTGGTGGCGCTGC 4534332 37 100.0 38 ..................................... TAACCATGGCGACCAGCAGCACGATGGCGTACATGGCG 4534407 37 100.0 37 ..................................... CTGAGACTACTTGTCGCTGGCGGCGGCCTCGAACTGG 4534481 37 100.0 38 ..................................... TAACCATGGCGACCAGCAGCACGATGGCGTACATGGCG 4534556 37 100.0 38 ..................................... CTTACCAGCCAGCATGTAGAACAGCTTGGCCGGCACCT 4534631 37 100.0 36 ..................................... TTGATGGCGTACTTGACGAGCTTCTTGGTGTTCCAG 4534704 37 100.0 37 ..................................... AAGCAGTCCAGGTCGATGGTCTTGGGCGCGGCGTTGG 4534778 37 100.0 36 ..................................... GCGTGTCGCCGCCGCAGACCAGGTTGACGATCACCG 4534851 37 100.0 36 ..................................... TCGCTGGACGTCACCGTGAAGCAGGATCATCGGCTT 4534924 37 100.0 37 ..................................... CGTTGAAGGTCTTGATCTCCTCGCCGTTGGCGAACAC 4534998 37 100.0 39 ..................................... GTGCCATCGAACTCTTCCTCCGACTCCGACGCTTGTCGA 4535074 37 100.0 37 ..................................... CCCCCATCGCGCGCAGGTCATCAGTGACGCTGTTGAG 4535148 37 100.0 37 ..................................... CCACGCAACCTCGCCATTCACCATCCACCCCGTATAG 4535222 37 97.3 36 ..................T.................. GGAACCTAGGCGGCCTCGACAATCGCGTTGCGGCGG 4535295 37 100.0 38 ..................................... ATCGATGCCGAAAGGCCTGCCGTTGGGCAGGCCTTTTC 4535370 37 100.0 36 ..................................... GCCAGAACCAGCATCACACCCAGCGGCATGAGCAGG 4535443 37 100.0 36 ..................................... GCGACCTCGGCGTAGACCGGGGCGGCGGAGAGCGAC 4535516 37 100.0 37 ..................................... ACGAGGGCCGTGCCGATCTGCTGGAGCCGGAGGTCGA 4535590 37 100.0 37 ..................................... ACAGCCCCACGAACGCGCCAATGAACTGCGGGCAACT 4535664 37 100.0 38 ..................................... GTCCTTGGGGCATAAGCCTCCGTGGACGCGGGTGAACC 4535739 37 100.0 37 ..................................... TTTTCTTGATCACGTCCCAGACGTCGCCGGGCATGGT 4535813 37 100.0 39 ..................................... ACGTTCTCCTTGTCTCTAGCCTTGAAGGCTTTCAAACGG 4535889 37 100.0 37 ..................................... ACTTACGGATACCTATGGATAACAAACGAACGGCGAG 4535963 37 100.0 36 ..................................... CTCAAAGTGGCTGATGATGTGCGCGCGGTGATGGGC 4536036 37 100.0 40 ..................................... TGGCGGCGATCTTGTCGCAAGAGTACCGCACTAGCGTACC 4536113 37 100.0 35 ..................................... GCAGGTGCAGTTTGCGCTTGATGTTACGATCAGTG 4536185 37 100.0 39 ..................................... CCAGGTAGCGGCAATTCCGGCGTACGACGGTGCAGCCGG 4536261 37 100.0 36 ..................................... ACGACCGACGACGGACGCGGAACTAGGCGGCCTCGA 4536334 37 100.0 37 ..................................... CTGCGGCTGCGGCGCTGCCCACAGACGTCGTCCCCCG 4536408 37 100.0 36 ..................................... CTTGTCGAGCTCAATGAAGAGGCGGGGCAGGGAAGA 4536481 37 100.0 37 ..................................... ATCGAGGTTGAGCACCGTGGGCAGCTCGCGCTCGAGG 4536555 37 100.0 39 ..................................... CCTATAGGAGGCTTGCCGACGTCCAGTACACCGGGGCCG 4536631 37 100.0 36 ..................................... AGCGGTCTTTGCTCCTTATCGATGATAACACACGAG 4536704 37 100.0 36 ..................................... TCGGCGGCGAAACAGATAGTCCGCAGCCAGATAAAT 4536777 37 100.0 37 ..................................... CGAAGATGCGGAACTGCGCGGCGAGAAGCACCACGGT 4536851 37 100.0 38 ..................................... TCGGTGGCGGTGAAGTTGTTCAGCACCCAGTTGGCTGC 4536926 37 100.0 37 ..................................... CGAGAGAATGCCGTAGTTCTCGGCGTCTCTCGAGAAG 4537000 37 100.0 36 ..................................... CTCTCGTATCGCAGTGAATCCCAAAGGGAGAGACGA 4537073 37 100.0 36 ..................................... GTTTGGTTCCATCAGAACTACGAACCGGACTTCCGG 4537146 37 100.0 39 ..................................... CCCGACGTTGTAGTGCATGGGAAGGAAGTGGTGACGGAA 4537222 37 100.0 36 ..................................... AAAAGACGATGGACGGAGGACGCGGACGTGGCTAGC 4537295 37 100.0 38 ..................................... TCCTGTCACTGAGGGGGTTTAAACAAACCCCCGCGGAT 4537370 37 100.0 37 ..................................... CTGACGATGCTCATAACCGAGACCTCCACGGGAGACT 4537444 37 100.0 37 ..................................... GACGCCACGGGCGACGACTTGTTGTCACACGCCGCTT 4537518 37 100.0 38 ..................................... GCGTTGCCGAGCACGTCGGCCATCACGCCCTTCATAAA 4537593 37 100.0 35 ..................................... CACGCAGCGTGACGGTGGCGATCTGGTGGCGCTGC 4537665 37 100.0 38 ..................................... ATGATTCATGCGCGCACCGTGTCTCGCCGTTGCGAGGG 4537740 37 100.0 37 ..................................... ACCGTCTTGCGAACTCGCCGCATCCTTGGAAGGATGC 4537814 37 100.0 36 ..................................... TCGAAAGGCATCATCTCGCCAAACCCCGCGACCCCC 4537887 37 100.0 36 ..................................... TTTATTGTCCAATCGCGTGCGCGTGCGTGTGCTAGA 4537960 37 100.0 38 ..................................... CCTCAACGGTGGGGCGATCCAGGATGCCGAAGTCGCCG 4538035 37 100.0 37 ..................................... TAAGGAGTGCCTATGCCCCAAAACTAGCGTTTGGCAA 4538109 37 100.0 37 ..................................... CCGTTACGTGCGTGCGATGGCCTCGCCACGCTACTTA 4538183 37 100.0 39 ..................................... GCCCGTGACCTCGTACTTCTCTACCATCGCCGGGATCTC 4538259 37 100.0 38 ..................................... CCACGACGCTACCGGGGTAGCCGTCGCGGTCGCCGTTG 4538334 37 100.0 37 ..................................... GGGTCCGCCTTTCTTTTTTCTTATTCTTTTCTGCCTC 4538408 37 100.0 37 ..................................... TCCGCCTCATCGTAGAAGCCGAACGTCCTGATGTCGT 4538482 37 100.0 39 ..................................... TTCTCGCCGTCCGCGTAGACGTACACCGTGCCGGCGTGC 4538558 37 100.0 36 ..................................... AAGCACTCGGGGCACGTGTCGGAGTTCGACACGTCG 4538631 37 100.0 37 ..................................... ACGACGGACGTGGCTAGAAGGTCTTGGCGAGCGAGGC 4538705 37 100.0 39 ..................................... ATCCCGGAGGATGTGGGTGAACCTACTGCCGGACACAAC 4538781 37 100.0 38 ..................................... AATGATCAGGACAACCCCGAGAAGCTGGGCGGCGCCAT 4538856 37 100.0 38 ..................................... CTGCGGAGCATCGTTTACGGCGTGGACTACCCGGGTAT 4538931 37 100.0 37 ..................................... ACGACGGACGTGGCTAGAAGGTCTTGGCGAGCGAGGC 4539005 37 100.0 39 ..................................... ATCCCGGAGGATGTGGGTGAACCTACTGCCGGACACAAC 4539081 37 100.0 36 ..................................... ACGACAAAGAGCAAGAGCGTGATCAGCGTCGCGATC 4539154 37 100.0 36 ..................................... ACGACCGGGGCCGCGGTGGGCTCGGCCGCGGCGGAC 4539227 37 100.0 37 ..................................... TTGCCGTCGCTGTCGTTGTCGTAGAACCAGAGGCCGA 4539301 37 100.0 38 ..................................... ATGCCGAGGAGCAGAGCCCCCGCCACCACGACCGAGAT 4539376 37 100.0 38 ..................................... AGCAGCTACTTCTGGTCGCAGCCGCCCATCGTCTCGTT 4539451 37 100.0 38 ..................................... GCGAAGTCCTGGCCCCTGCGGTCGTACTCGCTGACGAG 4539526 37 100.0 40 ..................................... CTCATCATCTGCACCTTGCCCTGGTCGAGCGTGGCGGCCG 4539603 37 100.0 38 ..................................... GTCTGTAGGGGCGACGCATGCGTCGCCCCTACATGCCC 4539678 37 81.1 37 ...T..C...G.A..T..T...A.............. TGATCCAAGATATAATGATGGTCGAAGTTACGATCAT 4539752 37 86.5 37 .......CG.G........C............A.... CCGATCAGCCTACACAACATCCGTCGTATACCCTTCC C [4539758] 4539827 37 86.5 35 .G....C...G........C.C............... CCAATTCTCTGTCGTGGTCGCGGTGTGCCCCCTAG 4539899 37 83.8 37 AG..C.....G........C.A............... CCGTCCGTGTGTCTGCATTGAAAATGTTGACCCAATT C [4539903] 4539974 37 94.6 0 ..C...C.............................. | ========== ====== ====== ====== ===================================== ======================================== ================== 84 37 99.2 37 CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC # Left flank : AACAACCATCCCAACAAAACCAGGGTTTCACCAACCGTTCGTGGTCGGCGGTCCAAACGCAGTTCGCGTAGTGGACGGATAGGGCCAAGCATGTGTTCAATCGTCGTGGGGGAAAGCGTACCCCGGCGTAGGCGGAGCATTTGCAGAGCCTGTTGCGTTTCGGCTGTGAGCATAAAATAGCGTGTCCGTACAGCTTCAGGGCGACAAATTGCTCGTCTCAGTACACTCAGACAACACACAGCCTCAGCCTGACGGGGAAGAGGCACACGATGCGTAGCAGCGATCAAACGTTGCAGGACAACAGGCACATCTGCAAGGTAACACGCCCAGCGCAGCATAGTCTTGCCTTTCAACCAATGACCTGATACAATGACAGTACTGATACCATCATACACAAAAGTGCCGGCCATTGCCATTGTGTACAATGAAGGTGGGCATCGGTTATCTGGGAAAAAGCGCATACATCTGCTTGAAACCCTGCCCCCCTGGTGTGAGACGGA # Right flank : CGTCACACAATGCCCGGTAGGGCGCATGTTCTGTGCCTCTGCCGATGTTACCCGATGTGGTTCTTCTTCTGCTTCCACTTGCGCTATGCAACCCCACACTTTGAGTCGCCTGCGGCATTGGAGTGGAGAAAACTATCAGTAGCGACGTAGCTTGCTACTTCCTTCTTTTGTACAGTAAATGATCACTTCTCCTGCGCGATACCTCAAATCTTGCTATACTACATAACACATAGATCGCGTTGGAAAGGAGCCGGGCATGGCCGCTCGTCGCATTTTGCTGACGATTATCGGGCTGTTGAGTGTGGTGATCCTGATAGGGAGTTTGAGCGCCGGGGTGGTTGCTTTTCTGCTCATAACCAATCGCCCTGTCGATCAGAAGTTACTGGTACTGGGGCCAAACCGCCGTCTCGCTATTGTTGATCGCCAGGGTGTGGCTCAGGTACTGGCCGAGGATGCCAGCCCCGAATTGTTTCGCTATCCTGCGCTGGCCCCTGATGGAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-27] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //