Array 1 8695-11161 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUCD01000049.1 Klebsiella pneumoniae strain 185G1 contig_00049, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 8695 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 8756 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 8817 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 8878 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 8940 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 9001 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 9062 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 9123 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 9184 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 9245 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 9306 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 9367 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 9428 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 9489 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 9550 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 9611 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 9672 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 9733 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 9794 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 9855 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 9916 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 9977 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 10038 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 10099 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 10160 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 10221 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 10282 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 10343 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 10404 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 10465 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 10526 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 10587 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 10648 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 10709 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 10770 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 10831 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 10892 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 10953 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 11014 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 11075 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 11133 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //