Array 1 18835-19463 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PXYY01000019.1 Neisseria iguanae strain ATCC 51483 Scaffold19, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=================================	===================================	==================
     18835	    33	  97.0	    33	C................................	ACAACATCGCCGCCTTTTCCATCCGCGAACATT  	
     18901	    33	  97.0	    35	A................................	CAAAGCAGAGGCATCACAGAAAGCGCAGACGCATC	
     18969	    33	  93.9	    35	AG...............................	GCACTTTGATCGATGGCGGAAAACCGGCACTGATG	
     19037	    33	  93.9	    33	AA...............................	TCGTTTTCAAAACCGTAACCAAATCGTGGAATT  	
     19103	    33	  93.9	    32	TC...............................	ACAACGGGAAACTGCCACCCGGTCCTTGTTTT   	
     19168	    33	 100.0	    33	.................................	AGGGTAAGCCGAACTCAACTGCAACGCAAATCG  	
     19234	    33	  93.9	    33	AC...............................	TCGGACATAAGCGCGAATTGACCGACAGTGAAG  	
     19300	    33	  97.0	    33	.C...............................	GTATGAAAAGGCCGGTGATAGCGGTGTTCGGGC  	
     19366	    33	 100.0	    32	.................................	TGTTAGTACTACGACATGCTGTTTACAGCCCC   	
     19431	    33	 100.0	     0	.................................	|                                  	
==========	======	======	======	=================================	===================================	==================
        10	    33	  96.7	    33	GTCAGCCGCCTTCGTGCGGCTGTGAGTTGAAAC	                                   	       

# Left flank :   AATATCCGCCGTTTTTGATGAGATAGTCTATGCTGATGTTGATTACTTACGATATTTCGCTGGAAGACCCCGAAGGACAGGCGCGCTTGCGGCGGATCGCCAAACTGTGTTTGGACTATGGTGTCAGGGTGCAGTATTCGGTGTTCGAATGCGACATCGCCCCCGACCAATGGGTACGCCTGAAAGCTAAACTCTTGGCCACCTACCAACCTGAAACCGACAGCCTGCGCTTTTATCACTTGGGCAGCAAATGGCGGCGCAAAGTAGAACATCACGGTGCGAAACCGGCAATAGATGCGTTTAAAGATACCTTGATTGTATAGCCCGCTAACCTGTTGTTCTCATGAAACTTCAGGGAGGTCGGCGAAGCTTGATTTCTTTAATAATTTGGATCAATGAACGGTTACTTAAATGTGATATAGTAACGATATGTGTTTTTGCAAGAACGATTGGCGAAACAGAGTGGAATAAACCTTGTTTGGCAAGCGTTTTGGCAGAGG
# Right flank :  CAAAAGCAGATTTGCCAAGAGTGGCTGTTGCCCAAGCAAACGGTGTTCAACGTCTGCAAAGAGTTTAGAGAAAACGGCATTTTGCAAATCCATGACAATCTGGCCAACGGGCGGGAGCGGATTTTACGATTGACCGAAGTAGGCAAAGCCAAAGCCATGCCGCTACTCACCGCTCATCAAGCCTTGAGCGAGCGTGTGTTTGCAGAGTTTGGGCAGGAGCAGTCCGAGCAGTTGTTTGGCTTATTACAGCGGTTTTTGCAATTATTTCGGCAAACCATCGCCATCTGAGAAAAGTAATGATGAAATCAAATATAGAAAATACCCAATTGCTTGAACGCAGTCCGATTAGCCAATTATTTCTTAAATATGCCTTACCAAGTTTGGTAACGGTATTGTTTTTCGGATTGCAAAATATCGTCGATGGCATTGTTGTGGGCAACTATGCCGGTGCGGAAGCCTTGGGTGGGGTGAATATTGTTTTGCCGTTCTACAGTATGTTG

# Questionable array : NO	 Score: 5.61
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCAGCCGCCTTCGTGCGGCTGTGAGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched TCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-3.10,-4.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.74   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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