Array 1 45079-46632 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAYM01000035.1 Lacticaseibacillus paracasei NRIC 0644, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45079 36 100.0 30 .................................... TCCACACTTTGATTTTCATACTTACCTCCT 45145 36 100.0 30 .................................... TGATGAGGACAAGAAGAAGCAAGATGAAGC 45211 36 100.0 30 .................................... CTGCTGACAAAGATCAAGCTGTTGCACCCG 45277 36 100.0 30 .................................... ATACAGGGCTGGCGGACGCAACGGCATGAA 45343 36 100.0 30 .................................... AAGGTCGTCTGGTGTATCGCCACGCCAAGC 45409 36 100.0 30 .................................... AGGCATGAGTGAAGACTTCCATTACGCTTC 45475 36 100.0 30 .................................... ATCATGATGGCACACGGCGACACCGCATTG 45541 36 100.0 30 .................................... AGGCTTTACCTACGAATTCCACACCTTGTG 45607 36 100.0 30 .................................... CAACGGCTGCCAGTCCTGACAGCAAGCCCG 45673 36 100.0 30 .................................... GGATGCCACCCCGATGCTAGCCGATCACCT 45739 36 100.0 30 .................................... TGGCGATTTGATCGGGCATGTTGTCACGCG 45805 36 100.0 30 .................................... TAGCTTTATCAAGACCAACGCCACCAAGAA 45871 36 100.0 30 .................................... TATGATACTTTTCAGTTGTTGATCAACGGC 45937 36 100.0 30 .................................... TTTACAGAAACACCACCTAACTTTGCTGAT 46003 36 100.0 30 .................................... TTGACGGGGTCGAATTGCCAGAACCGTTTT 46069 36 100.0 30 .................................... TTGATTCGTACGCTGTGATTCAAAGTCTGC 46135 36 100.0 30 .................................... ACTTTGGTCTTTTGCAAAATCAGCACTTGC 46201 36 100.0 30 .................................... TGCATTTTTACTGTTTCATGTCGCAATCGG 46267 36 100.0 30 .................................... ACCCAGTTTCCTCGTTGCGCAGATGTTTGT 46333 36 100.0 30 .................................... ATTAGTCATCGTCAGTCACCTCTTCTTTCG 46399 36 97.2 30 .............A...................... TCTTATCCGTATCTGGCTCGCGTTTCACCT 46465 36 100.0 30 .................................... CACGGGGACTACATTATGGTTTCAGCGATT 46531 36 100.0 30 .................................... CCGGCGGTGTTGGTGTAGGGGGTTCCGCAT 46597 36 83.3 0 .......................C.....A..TTCT | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.2 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTTAGTCATTATTTAAGTGCCAGAGACTTTTCGTCGGTGACTGAACAGATCGGTGATACTGAACTTCAAGTCGTTCTCATCGAATTCTCAAAGGTGAACAGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGACAATCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACAG # Right flank : TAAACAGCAGTGATATTAAATTTAAGCTAAACTTGTCAAAAAGTGCCTCATTTTGTGACAAAATAAGGTGTTTCACTATTTATTGTGTGAACCAAGCCTCAATATTTACAAAGCTGAACCTTTCAACGTTCAGCTTAAAAGCCGCCGTCTAAAGCAATATCGTAGTAACCACATACACTCATGCGGTGATATATCAATCAAAAACTAAGTGCTATCTAACTCCTCTTGTGATAGAATTCATTATATATGAAATCGCTTACACAACGAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGTGCCACACTTTTGGTCAGCATGGGGTTGGCCGCATGTAGTAGTGGGTCGAGCTCTAGTTCGAGCAAGAGCAGCAGTAGTACGACCAGTCAGACGAGTAACGCTAAGGTGAAGATCAATACCGGCGCTGATGCGAGTGCCAAGGTGCCGGCAGCCGGTACCTTAGTGATGCGTCAGCTTTATGCTGCACCGCACGGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //