Array 1 71007-72560 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACWJJ010000003.1 Streptococcus agalactiae strain 705 NODE_3_length_116364_cov_16.474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 71007 36 100.0 30 .................................... TCTTTTAAGTGTGATTAAATTAATTGGTTC 71073 36 100.0 30 .................................... TGATATATCGTTTACAATGTCAGTTACGTC 71139 36 100.0 30 .................................... AACTTCTTCCGCAAATTTAGAAGGTGATTT 71205 36 100.0 30 .................................... TACTGTTATATCAGAGTTAAATTCACATTT 71271 36 100.0 30 .................................... AGACTTAGATTCTATTCAAGACATGGTTTT 71337 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 71403 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 71469 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 71535 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 71601 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 71667 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 71733 36 100.0 30 .................................... CCGTCGCCTATTGTTTGATTATTTTTACTA 71799 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 71865 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 71931 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 71997 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 72063 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 72129 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 72195 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 72261 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 72327 36 100.0 30 .................................... CAAATTACAGTTTCGACTGATTATGGAAAT 72393 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 72459 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 72525 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //