Array 1 2538851-2532660 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADOUB010000001.1 Rubrivivax gelatinosus strain CBS Ga0427570_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2538850 29 100.0 32 ............................. TTGTCGCCAACGCCGCGGGCGGCGTGCTGACC 2538789 29 100.0 32 ............................. CCGATGATCAGATCGGATGCCGCATCGAATTC 2538728 29 100.0 32 ............................. CGGCAGGCGATCTCGCGCGAGTGTCACGACGC 2538667 29 100.0 32 ............................. GCGGGCTCAGTCAGACGCAGGTGGGCGAGCTA 2538606 29 100.0 32 ............................. AGCCCTTGAGCAAGAGGATGGTTTGTATTTAC 2538545 29 100.0 32 ............................. AGCGGCGGCAGCGGCCGGATCCTCGTGAACGG 2538484 29 100.0 32 ............................. GTCAGGCATATTGGGGACCGCTCCGCTCATGC 2538423 29 100.0 32 ............................. GTACCGGACCAGCGCCCATGCCGCGGGCAGCA 2538362 29 100.0 32 ............................. GCGACCGGCGCAGCCGTGAGCTGGTGGCCGGG 2538301 29 100.0 32 ............................. CCGCTCGACCGTCCAGCTCTGGGAGTGACCCC 2538240 29 96.6 32 ............................G CAGTTCGTCACCGACGTCTGCCGCGTCGCGCA 2538179 29 96.6 32 ............................T CGGCCGGGTCACGCCCGGTCGTGGCCAGCGTG 2538118 29 96.6 32 ............................T CCGGTTCAACCGATACGGGCGCCCGCTGGGCT 2538057 29 100.0 32 ............................. AGGGAGGCGGCGCAGGCGGCGCAGGCGTCCGA 2537996 29 100.0 32 ............................. GGCGGCCAAGCGCACCTTCTTGTCAGACACCG 2537935 29 100.0 32 ............................. AAGCTGCCTCCCACTGACGACCGCTGGAAAAT 2537874 29 100.0 32 ............................. CCATCGGCGGCAGGCCGCATTGAGCGAGTGAC 2537813 29 100.0 32 ............................. CTGCGCGACGACATGAGCACGGCGGGCGAGTG 2537752 29 96.6 32 ............................G TATCGGCCTGCCCGTCCCACTCGTTGCCGTCC 2537691 29 100.0 32 ............................. GCGCGAAGGCGCTGGAGAAACGCGCTGAGCAT 2537630 29 100.0 32 ............................. CCGGGACGAGCGTGGAGCACTGATTGAGGCAA 2537569 29 100.0 32 ............................. ATGCCGGGCGTGCGGCGGATCACCGAGAGGTC 2537508 29 100.0 32 ............................. TGACATCAAGCCAGCCTCTGATGGCACCGTCT 2537447 29 100.0 32 ............................. TGGCGCGTTTTCCAAGGTGCGCTGACTTCAGA 2537386 29 100.0 32 ............................. CATCAGCGCAAGGTCGCGGAAAAGCTGGAAGA 2537325 29 100.0 32 ............................. TCTCCGCACCCGCCGCGCAGCCGCAGCCGGTG 2537264 29 100.0 32 ............................. GGCTCGTGATGGGCGCCACGGCGCGGGCCTGG 2537203 29 100.0 32 ............................. CAGCGCGCTCAGGCGATCCCTGCGCGTGCAGC 2537142 29 100.0 32 ............................. GGCGCCGTGACCTTCACCCCGGCCTAATTGCA 2537081 29 100.0 32 ............................. TGGCCTGCTGTCGAATGCTTGGCGCCGATGCT 2537020 29 100.0 32 ............................. ACCACGGCGCCCACCAGCAGGTAAGGCATCAG 2536959 29 100.0 32 ............................. CATGAATCGCTCCTTTGCGATGGGTGAATGCT 2536898 29 100.0 32 ............................. GTGATCGAGCCGCCCTGCGGATCGACAAGGTA 2536837 29 100.0 32 ............................. TGGCGCCAGTCGGCCGAGTTCTCGATCCTGGC 2536776 29 100.0 32 ............................. CTTCGGCTGGCCGCTGGTGGCCGAGCTGGGGT 2536715 29 100.0 32 ............................. CAGCCGTCGCCGTCGGGCTTGGTCGGGGTCCA 2536654 29 100.0 32 ............................. GGGGCGTCAAGCACCAGCTCGTCGGCGTAGTC 2536593 29 100.0 32 ............................. GAGACCGCCGGCCGCTTGCATCTTGGCGATGT 2536532 29 100.0 32 ............................. TGGCCGCCGAGATGCGCGGCGGCGGAGGAGAC 2536471 29 100.0 32 ............................. CAAACTTCCCGCTTGCTTCCTGGTAGCAATCG 2536410 29 100.0 32 ............................. ACGGGCTGGAGCCGGCCGTGGCTGCCAGCCTG 2536349 29 100.0 32 ............................. CAGAAGGTGAGGGCGGCCAGCCCCTTGGCGCC 2536288 29 100.0 32 ............................. AGCTACCTGGGTGAGATCCCCGAGGTGGTGCC 2536227 29 100.0 32 ............................. CGGCGCCTGCCTTCGCCACGTGGTCGACTAGA 2536166 29 100.0 32 ............................. GGATGCGGCGGGTGTTTCATCAGCACGTATAC 2536105 29 100.0 32 ............................. CGCGCCAACCCCGCTGAGCGGTTGTGCATTCC 2536044 29 100.0 32 ............................. CTCAGCGGTGCGCAGCGTGTTCGAGCTGGGAG 2535983 29 100.0 32 ............................. CAAGTCGTCTACCAGCCGACCGACGAGGACGC 2535922 29 100.0 32 ............................. ACGCTCTGCCGCATCCACGCCGAACTGATCGG 2535861 29 100.0 32 ............................. GGAGGCGCGGATGTAGTAGCTGGCCGCGCGAT 2535800 29 100.0 32 ............................. CTCGCGCTCTAGCTGATGCGGCCCATGCGGGC 2535739 29 100.0 32 ............................. GCGAGGCTCGCCCATGTCTTTCTCCCGCCCCA 2535678 29 100.0 32 ............................. GCGGAGCTTTGCAGCGGCCACGCCCTCGATGC 2535617 29 100.0 32 ............................. CAGCATGGCCAGCGTTTCGTTGTCGTGCGGCA 2535556 29 100.0 32 ............................. CGCCCCCGATCCCCAGTAGCCCGGCCGCACCC 2535495 29 100.0 32 ............................. GGCGCTGCGGTGTCGATGACGTCCAGCAGCGC 2535434 29 96.6 32 ............................G CGGCAAGGGCATCCCCGGCTGGGGGCGCCCCA 2535373 29 100.0 33 ............................. GCTGCGGCCAGCCGCCGAGCGCCCACGCTGGAG 2535311 29 100.0 32 ............................. ATCCCGGGCATTCGAGACGACGCGACACTGAG 2535250 29 100.0 32 ............................. TGGAAAGACCTGCAGGAATGGCTGGTCGAAAC 2535189 29 100.0 32 ............................. GTTTTCGCGCGAGCTTTCGAGGCTGGCAGCGC 2535128 29 100.0 32 ............................. CGCGATGGCCAGCGCCGCGCGTGCTGGCGCAG 2535067 29 100.0 32 ............................. ATGATCCGCAACGCGCTGGCGGGTCAGTGCCT 2535006 29 100.0 32 ............................. AGCTCGGGCAGTTCTTCCGTCTGCATCGCTCT 2534945 29 100.0 32 ............................. GGACATGGGGAAAGCTCCCCCCGGGTGCGGCC 2534884 29 100.0 32 ............................. GGCGCTCGCTTGCGTGCGGCCGGGTTTCGTGC 2534823 29 100.0 32 ............................. TAGGCAAGGCGAGTCGAACAAGAGGTCTATCG 2534762 29 100.0 32 ............................. TGGCGGGCATGTCGTTCAGGCCGAACCACAGC 2534701 29 100.0 32 ............................. GGCCATTCGCGCGCCACCTCTTCCCGCACAGC 2534640 29 100.0 32 ............................. ATCAGCGGCGCCGACTCGGCGCAGATCGTGGG 2534579 29 100.0 32 ............................. ACGAACGAAACGCCGGAGCAATGGGAGGCGCG 2534518 29 100.0 32 ............................. GCGGCCATCGCGGCGTTCGTCTGGCCCGGCAA 2534457 29 100.0 32 ............................. TGGGAATCCATGTGGCAGCAGATCGCCGAGCG 2534396 29 100.0 32 ............................. TCGCAGCGCTGGGACTGGACCGACAACAGCAC 2534335 29 100.0 32 ............................. TGCCGACGAACGAGGGCAGCGTCGGGGTCGCC 2534274 29 96.6 32 ............................G TGTCCGGGTTCAGCTCTGCCGGATTGACGACC 2534213 29 100.0 32 ............................. GATCTCAATCCGCCGGCCGAGCCACCGGGCGC 2534152 29 100.0 32 ............................. CTGAACAGGTCGCCACTGACGTGACTGCTGGT 2534091 29 96.6 32 ............................G TACCGATCGGCGACCGTAATCATGCGCACCGT 2534030 29 100.0 32 ............................. TGGCCGAGGCCCATCATCATGGTCGGGTCTCC 2533969 29 100.0 32 ............................. AGATCTACGTGCCGTTCGGCGCCAGCGGCTAC 2533908 29 100.0 32 ............................. GTCGCATCGGCGTCGGCCAGGCTGCCGGCGGC 2533847 29 100.0 32 ............................. AGGAGAGCGAATGACCGACGAAGTCCCGACCA 2533786 29 100.0 32 ............................. TGGTTCTTGATGGCAATGTGGCGTCCGCAGAG 2533725 29 100.0 32 ............................. GTGCGGTGTCCAAGCCCTCAGGCCCCAGACTT 2533664 29 100.0 32 ............................. TACCCCGGCGACCGCCGCAAGGGACAGCGCGA 2533603 29 100.0 32 ............................. GCCGCGTCGCTGGCCGCCCAGCGGCTTGCCGC 2533542 29 100.0 32 ............................. CGCTATTCGCGCCCGCTTCGTAACGAAAGAAC 2533481 29 100.0 32 ............................. CAGACCTGGCCGACGCAGCACCGCGGCGATCT 2533420 29 100.0 32 ............................. TCGTCGTAGATGCCGTTGATCTCGGCCTGCAG 2533359 29 100.0 32 ............................. CTTCGCAAGCCCCCGGCGATGAAGTACCACCG 2533298 29 96.6 32 ............................G TGATGAGGATGCAGCTCGTGGCGCTGTGCACC 2533237 29 100.0 32 ............................. GACGCCGGCCAGGTGGCGAGCCTGGCAGATCT 2533176 29 100.0 32 ............................. GCGGGCGACATCGTCGCGCTGAACGACCAGGG 2533115 29 100.0 32 ............................. GTAGGCGTTGGTGCTCATGGTCAGTTCACCGG 2533054 29 96.6 32 ............................G CAGCTCCGCGCGGCCGTCCGCAAGCTGCGCCA 2532993 29 100.0 32 ............................. TTGGCCCGCGCGATCTGGTCGTTGATCTCCAA 2532932 29 100.0 32 ............................. GACTACGACCGCGTCGCGATGTACGGCATCCC 2532871 29 100.0 32 ............................. CTCACCGGCACCGGTTTCTTCGTGCTCGACTT 2532810 29 100.0 32 ............................. ACCAAGGCGCTGCACGAAATCATGCAGCGCCA 2532749 29 100.0 32 ............................. TGGTGGCACAGCCTGTCGGACACCCGGCCTGT 2532688 29 93.1 0 ........................C..T. | ========== ====== ====== ====== ============================= ================================= ================== 102 29 99.6 32 GGCTGCCCCGCGCGAGCGGGGATGGACCC # Left flank : TCGCCGCAGCCAAGCGCATCGAGCAGGGAGCCGACGAGACCGTGGACCGGCTGGTGCGGCAGAGCGCGGCCCGGGAGTTCCGCCGCATCGGCCTGGTGCCGCGGATGATCGACGACATCCAGAGTCTTTTCGGGATCGCACGCGATGGCGCTGACGGTGGTGATAACGCGTGACGTGGACGACCGCTATCGCGGTTTCCTTGCGTCGGCAATGCTGGAACTGGCGGCCGGCGTCTATGCCAGCCCGTCGCTGACCAAGGGTGCGCGCGAGCGCGTATGGGGCGTGCTGAAGGACTGGCATGCCCAACTAGGGCGAGGCTCGATCACGCTCGTGTACCCGGACAGACAGGCGGATGGTGGACTGGCCGTGATGCACCTGGGCGAACCGAACCGAACTGTCATTCGCGTCGACGGCGTGCTGCTGACAACCAAGGGTTAACCCTTGCTTGTTTGAACGTTCCTTAATAAATCGACTTTCCGGACAAGAACTTAGGATCTAGA # Right flank : ATGCCGCCGTACTGGTGGTAGGCCACTCACCGCCTCTCCCTCAGCCCCGGCAAGCTCTCGCGCCCGGCTGCCGCAGCAACACCCCGGCCGCGCCGGCGACGAGGCCGGCCGCGGAGCCGGTGAGGCAAAGGGAGATGTCCAGGAAGGCGACGTAGGCGCCCATCGCCACGCCGCGTGCCTGCGGGGGCGCGCGCCGCACGGCTTCGACCCCGAAGGCCGGGAACGCCAGCGAGTAGCCAAAGCCGGTCAGCGCCGCGCCAGGCCCGCTCGCAGGCCATGGGCGAGGCCATCCTGGAGGCCACGGCCCGCGTTCTGGCCGAGCGCGGCTATGCCGGCACCAACACCAACCGGGTGGCCGAGCGCGCCGGCGTCAGCGTCGGCTCGGTCTACCAGTACTTCCCGCACAAGGACTCGCTGGTCGCGGCGCTGCACGAGCGCCACGGCGCGCGGATGTACGCCGCCATCGCAGCGGAGCGGCCCGACGGCCTGCGCGGCCACGT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTGCCCCGCGCGAGCGGGGATGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //