Array 1 790642-790317 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWZU01000002.1 Desulfovibrio gilichinskyi strain K3S, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 790641 34 97.1 41 ..-................................ AAAAATGCTCTTGAATGGATAAGGATGGATAAGGCACAAGA AC [790636] 790564 35 100.0 35 ................................... CAACTCGCTCATTTGCTCAAAAGGTAACAATGAAA 790494 35 100.0 39 ................................... TGGTCGTTTTACGTCTGTACCAGTTTATACAAGTAGCAC 790420 35 97.1 34 ...........G....................... AATAGCGAACCGCTCCAGTGCGGATGTTACTCAG 790351 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 5 35 98.8 38 GTCTTAATGCCTCAATTGGCGGAGCCCATTTATAC # Left flank : GTCATTTTCAGATCATGAAAATTACCACCAAAAACAGGAGGATTTTCTTCCCAAGAATCAAGACTGCGTTGCCCTATTTCTGTAAATCTTTCTGCCAACTCAACCATATTTTCTGCTAATTCATCAGCACTATCCCCGACGCAATTAATGCCAAAGGTATAAACCTCCCCTGCCGCCATCTTCATTCTTCCGAACTCGCAAACAACAGGAACCATGCCCACAGGTAAATTATGTGCATTACTTTTAGGCGTAGCATAATCGCCAAAGACGGCTGCCAGAATCAATCCGCGGACTGCACTGCCATGATAAACAGAGCATTGTACCGAGCGGGTTAAAACAAAGGAAAAACGAAACTGGCGAACCGGAATATGCATGCTAAATTTCCTTATACAAATAAAAATTATCAGAAGACGCAAACTATACGACCTCTAACACCATTTCGCAATAGATGCAGAGCCTTACAAAATAAAAAAAACAAGCTTCGCAATTAAGCAAAGCTT # Right flank : AGCACCCTCTGGGAGCCCTTTAACCATGCGGTCTAAGAAGGGCAAATACGCTGGCGATTTATTTTGGACTCTTTTTCGACTTTTTTACACCTCAAAAACGGCCTAAAATGGGCTCCAACCCATTGAATTAACTAACTTGCGCCAGCCTTTTTTATAAATATAATCAGAAACAACAATTTTATCAAGAATTTTAGTCAATTACAAAAAGCACTATTCAAAATAGAAATCACTCGAACATTGTTAGCATTAACACCTTTCCTCAATAAAAAGGTCAAGCTTACCATCCTTATCACGGATATTGACGAACTCTCCATTATCATAATGCGCACGGACCTCTTCGGGAATTTCTCGCAGGAAAAATACTATTTTGTATTCCTTATAGTCACCGGACTCACTAATCCGTTCACTTGTTTCAATTCTAAAATATTTTAATCCTCTGTTGGCTCCACTCATCTGAGCTCCAAGCTGCTGCCCCCAAGCTCGGATATCGCTCTCTTCAG # Questionable array : NO Score: 3.00 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATGCCTCAATTGGCGGAGCCCATTTATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 794349-793955 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWZU01000002.1 Desulfovibrio gilichinskyi strain K3S, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 794348 35 80.0 38 .CA..GCCAT......................... TTACAAGAGCCATTCGACACGCATCTCTCGGATGTTTG C [794342] 794274 35 100.0 38 ................................... TTACAAGAGCCATTCGACACGCATCTCTCGGATGTTTG 794201 35 100.0 34 ................................... GCTGCTTTAGTTAAGCTGACAGAGGCTGATATGT 794132 35 100.0 37 ................................... CAGAAGTGAAACCACCGACGGAGAATCCAGACGACAG 794060 35 100.0 36 ................................... TTTTATCTGTTTGCGTATTTGCTTTCGGGAGAGCTT 793989 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ====================================== ================== 6 35 96.7 37 GTCTTAATGCCTCAATTGGCGGAGCCCATTTATAC # Left flank : TTTTTAGGCGAAGAGATAGTAATGAGAATTGAAAATGTGCCTCTTACGGGAGAAGCTGACATTCGTCAGTATGGCCAACAAGTTGGGAGTCAGGCAGCTACTCCTGAAGCAAAAGGAAAACAATCAAATCCTGCTCGATTAATGTTATTTCCTAGGCTGGAATTCAATTCCGAGTTACAACGCCGACACGAAAAGACAAAATATGAGGTGCAAATGCATCTAAGAGAAAAACCAAAAAAACTCCTTAATTATGAAGTTAAAAAAAACTCTAAGCACTACATTCTGTGGGATATTTTAAGTAAAGAAGGTATTATATTTCAATCCTTGAAAAAACCGCTAGCAACAAGCCTCAAAAAACAACTCCGCAAGCCATTACCTCGTATAATTTTAGAGCAATCGTTCAGAGCTGCAATGGCCAAAAAAAGATAAGTCAAAACAGATACTGAAACAAAAATATTGCAATAAAAAAAGCTGTGATAACTATCACAGCTTTTTTTATT # Right flank : AGCACCCTCTGGGAGCCCTTTAACCATGCGGTCTAAGAAGGGCAAATACGCTGGCGATTTATTTTGGACTCTTTTTCGACTTTTTTACACCTCAAAAACGGCCTAAAATGGACTCCAACCCATTGAATTCGTTAACTTGAGCTAGCGATTTTTATAAATATAATCAAAAACAACAATTTTATCAAGAATTTTAGCCGATTACAAAAGGCACTATTCAAAATAGAAATCACTCAAGTATTTTTAGTATCCGCTTTATAGTTCAACCCAATAACTACCTGTAATCATATCACAATATAATGATTCGAATAGACACTGTGTGTAACCTGCCAAATCCCAATGCTTTTTTATGTATACGGCTGTGAATTGGTCAGTAACTTAAAACATGCGGCAGATTTTGGAGTAAAAAGAGTAGATCCTTTTAGATATAACGATTCTAGATGCTTACAGCAATAAAGACAGATGTATAGTATATGGCAAATATAGTATTTTCTTTTTGATAT # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATGCCTCAATTGGCGGAGCCCATTTATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 24874-25259 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWZU01000003.1 Desulfovibrio gilichinskyi strain K3S, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 24874 36 100.0 34 .................................... CCCCAATCCCAACGGGAAGTGGCGGAGTGTTAAA 24944 36 100.0 34 .................................... TGAGGATATTCTTATCAAATACAATTGCACCACT 25014 36 100.0 35 .................................... TGCCCTACTTGGATAGTCGCATCCCGCCCGATTTC 25085 36 100.0 34 .................................... CACTTTCAGAGGAGCCTTCCTGTAACCCCAACAA 25155 36 100.0 33 .................................... CGCAATTCATGTCGGTTGCGTAGGGTTTAACAA 25224 36 77.8 0 ..........AG................CAG.AA.T | ========== ====== ====== ====== ==================================== =================================== ================== 6 36 96.3 34 CTCAAAAGAGGTATCCATATCGGTATGGGTTATGAC # Left flank : CATGAGAGTTCAAGTCTCTCTCCCGGTACCAGATAAATCAAGGGTTTACAGCAATCAGCTGTAAACCCTTTTTTGTTATGAGTGAAATCTCTCCCGCTTTTCTCCCGCTTTTATTTGAATTTTTAATTATATTGGCTGTAGTTCTATTTTGCACATCTTGTATTAAACCTTTGCTATCATTCTTATTCAATGAACATCTTAGTTACGTTTTGTTGGAAATCATAATTGGTCTATCAATTTTTTTGAATTCAATGCGTCGTCTATATTAGCTGTAAAAAAAACTGAGTGCATCCTCAACTTTATTTTGCAATATATCCTGTGGAAAAATTTTCAGGCGATTTTTGTAATTTTGCAACACGTCGAAATAACGTGTTAAAAAGTTTAAAACCCAAAACGTTTTGCTACGTCCTGAAAAAGGGTGTGGAAAAGTGTTCACTTTTCGGACGTAGCTGAAAACGGCTTTGCAAGTAGCTGGAAATAGGGTAGATAAAAATCATCCT # Right flank : TTAAATTTGCTCTTGACGCAACGAAGTGTTGAGGGCAAATTTGTCTTATGAGTAAAATCACACGCCACCTCATTGCTTACGATATTTCTTGTGATAAGGAACGCTATAAGGTTTCTAAGGTGCTTGAGGGATTTGGTTTCCGGGTTCAGGAGAGCGTTTTTGAATGTGATTTAAATACTCGTCTGAAAAGGAAACTCATATCAAAACTTGAGAATCTTGAAGTAGAAACCGGATTTATTTCTATCTATCTTGTGGGTAGCCATAAGCCCAAGGATATCGGCAATGCCCCGCCTCGTTTTAATGAAAATTACGCCTTCGTTATCTAATAAATATGACAACAGATCTAAGTTCCCTCTCTTCTCTCAGTTGGTACTGCGTTCAAATATCCCTGACTAATACCCGCAATACTTTTGCAAAGCAGCATCCGCTCTTTGTTCTGGATGCTATTTTCAAGTTCGCCCTCGGGCGGGCTGGTCTGCGCGGGCTGCAATATTGTTTTC # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAAAAGAGGTATCCATATCGGTATGGGTTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 28455-28845 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWZU01000003.1 Desulfovibrio gilichinskyi strain K3S, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 28455 36 100.0 35 .................................... CAATAATTTGTCCTCAATACTAATTCGCTATCAGA 28526 36 100.0 35 .................................... TTATATCAATACTTTCTCTGGGAAATTGGTCACAT 28597 36 100.0 34 .................................... TGTTGGATTTAAGGTAATAACACTAGTTATTAAA 28667 36 100.0 34 .................................... CAAATATTGACAATATCACTGAATTCTTGATCAG 28737 36 100.0 37 .................................... CCAAATGAGTAGGGAGTAGGGGAAGTTCTTTCTGTCA 28810 36 83.3 0 ...........................AA.CC.TG. | ========== ====== ====== ====== ==================================== ===================================== ================== 6 36 97.2 35 CTCAAAAGAGAGATCCATATCGGTATGGGTTATGAC # Left flank : ATAAAAACATCATAACTTCTAAGGATTTTGAAGCCGTTACTGCTACAAAATTTAAACTGATCGGTAGCAGTATGGGTAAGATTCTTGAGCATTTTGAAAGGGAAATGTGCATCCGCATAGCAACAGAATCCGGAACATTTGCACAGTTGCTGGATGCGCAGGTTCAGAACCTGCAAAGCTGGGTTATGGGACGGGATAAATTGAAATTTTTCCGTAGCGGAGAAAGGAATTTGGTTATGGGAGAAGTTGAAATTATTTGATTTTATACAGGTGTAAAAAACTGAGTGGTACCTCAACTTTTTTTAACCGCTTTTGCTGTGGAGAACTTTTTCAGGCAATTTTTGTGATATTGTAACTGGCCGAAATAGCATGTCAAAATTTTCAAAACCCAAAACGTTTTGCTACGTCCCGAAAAAGGATGTGGAAAAGTGCTCACTTTGCAGACGTAGCTGAAAACGGCTTTGCAAGTAGCTGGAAATGGGGTAGAATAAAACCATCCT # Right flank : CAAAAAGAAAAACCGCAACTCCAATCGGAGCTGCGGTTTTTTTGTGTGGTGCAATAAAGCTTTGTATTAAATTAAAAGGCGTTAAGCAGCCATATTCGGAAAATTGGGTCTACTATGTTCCACTGGCCGTCTTTGCTCTTTTCAATGAGATCTTGCTCACTAAGATATTTGCGGGCTGACTGAACTCCGCCGAGAGTTAGGTTGTGGGCTTGCATAAAATCGTTTGAGGTTAGTGACGCTTTCTCCTCTTCTGCAATTCCGCGCAGTAGTTTTAATTGTCCGGTACTGATCCCTTGGATGATAGCCTGATATCCGTAGCGTTCATTAGCTATGAGAGCTTCAGATGCTTTTGCAACGTCTTCTATCGAACATTCTTTTTCGCATAATTCAAATACTCGGTAAGCCAGAGCTTGAAGATAGTACGGATAACATTCAACCCTCTGAGATACAGCAAGGGCAACGTCTTCCGGGCATTGTTTGCCGGACTGCTCGAACTGGCT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAAAAGAGAGATCCATATCGGTATGGGTTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.50,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 30427-30818 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWZU01000003.1 Desulfovibrio gilichinskyi strain K3S, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ================================= ================== 30427 38 100.0 33 ...................................... CGTAAAAAACTACCGCCGCCATTGCCAAGCAAA 30498 38 97.4 33 ....................................A. ATCTAAATACTAATTCAAAAGTAACTCCAACTT 30569 38 97.4 33 ....................................C. CAGTGAGAGAATCCACATAAATCCATTTGAATT 30640 38 100.0 33 ...................................... CTTTTCATTAAACTTTAATTTACATTCATATTT 30711 38 97.4 32 ...............................C...... TCACCAGCTCTATTAATAGCGGCAGTTTCAGC 30781 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ================================= ================== 6 38 98.7 33 CTCAAAAGAGAGATCCATATCGGTATGGGTTATGACTT # Left flank : AGCAAAGATAACAACGTTCATGCCGTTTCCGGCATGGCTTGCCAATTCGCTCAATTCAGCCACGCGATTGCAGAAAGGCTGGTCCGGCTCCAGTGTGTCTGTATGGAATGGGTTTTTCATAACTATTGTTATTAAATTATTGTAAAGGAATAGTCAAAACTATTGTAAAGAAATTATCGTAATACAATAGTTAAAGGTAGTAGGCCGCTTAAAATTTTCCGTAGCGGATATTTGGGGTTTGAGATGCTGAAATCATTTGGTTTTTTGCAGCTGTAAAAAACTGAGTGCGTTCTCAACTTTTTTGAGCTGTTTTTGCTGTGGAAAAGTATTTTTAACGATTTTTGCCATCATGCAACTCATTGAAATGGCGTGCTAAAAAAATCAAAACCTAAAACGTTTTGCTACGTCCTGAAAAAGGGTGTGGAAAAGTGCTCACTTTGCAGACGTAGCTGAAAACGGCTTTGCAACTATCTGGAAATGGGGTAGAATAAAACCATCCT # Right flank : TTTTGCGTATAGCTACGCAGTTCGTGGTCAATCCGGCAATGGTCTAAAAAATATGGCAAATTAAAGGATGTTCCACCTCAATTTCAAAAAATTTCTGCTTCCGATGAAATGAAAAAAGTACGCGAGGAAAATGCCCGTCTTCGCATTGAAAATGAAATCCTAAAAAAGGCAGCGGCGTACTTCGCAAAAGAGTCCCTCTAAAGTACGCTTGGATAGCCTTTCATGAAGGACTCTACCCTTTGGTTTCTTTGTGCAAAGTATTGTCAGTCAGTAGAAGCGGCTATTACGACTGGAAAAAGAGATCTACGAGTAAGCAAGAGAAACGACAGGAAATAATTATTGAGGCTGCACGTCAGTCTTATTTGGACAGTGGGAAGATGTATGGGTATCGAAAAGTGCACCATGATGTGCTTGAAAATACAGGTCTTTATTGCTGTGCTGAAACCGTAAGCCCCCTACTTGCTGCCGAAGGATTGAAATCTAAAACGATCCGCAGACAT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAAAAGAGAGATCCATATCGGTATGGGTTATGACTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.53%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //