Array 1 1776-1411 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZI01000106.1 Streptomyces otsuchiensis strain OTB305 NODE106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1775 30 100.0 37 .............................. ACGGCCAGGACGAGCGCGACCTCTCCCCCGGTGTGGA 1708 30 100.0 36 .............................. AGTACGAAACCCTTGCGCTGCATGTGCGCGCAGATA 1642 30 100.0 38 .............................. TAGACGGTCCGGGGCGTCCGGCGGGGCAGCGGCTCCCG 1574 30 100.0 36 .............................. CGGCGCGGGCGCGGTTCTCCATGAGGGTGGCGGCGT 1508 30 100.0 38 .............................. CGTGATGATCACGGCGGGGCCCCTGGGTGTGTTGTGGG 1440 30 83.3 0 .....................A.CG...TT | ========== ====== ====== ====== ============================== ====================================== ================== 6 30 97.2 37 GTCCTCATCGCCCCTTCGAGGGGTAGCAAC # Left flank : CGGCATGGGCACCGAGATCTGCCGACCCGGCTTCCGTGGCTGCCCGTTCATCAACGCCGCAGCCGAGTACGCCGACCCCGACCACCCCGTCCGCCGACTCGTCACCACCCACCGGGAATGGTTCATCGGCCAACTCCGCGAACTCCTCACGGCCGCCGGGGTCGCCCACCCCGAGCCGGCCGCACAGGAACTGATGATGCTGCGCGACGGCGCCGCCATCGCCGGCTACCTCGGCGACCCCACCACCGTCGCCAACGCCCTCGAACGCGCCGCCCTCGCCATCATCACCGCACACCGCTGACCCGCCCACCGGCCCGCCGCTACGCTGACGACCGACACGAACCACCCGCCCCGCCCACCGGACAGGCCGATCCGCCGTAGCCTGGAACACCGGAATTTCAGCAACTCTCCGGGGTTTCCCGCACTACCGGAGGTCCGCTGAAAAACCACCCCCACACCTGGGTCACCGCACCCACCACGACCTGGACCTTCACAATGGG # Right flank : TGAAAAGTCCAGTAGTGATGTCTCAGGTGTCGCCAGCCTCTCCGCTTCTGGGCGGAGGCGGCGCCTCACACTGCGTAAGCACGGGATGGCCTGCCTTTCCAGCCCGGACGAAGGGTCCCCGCGACACCACGCCCCCACCGCCCGTCGGTCAACTCCCGCCCACAAGCGGAGAGTAGCGAAGAGAACCCCGCCCGTGGCTGTTTCGGCGGGGTGGGGCAGAATGCCGGGGATGCCTGCCGGGATCGGGCGGGCCCTTCTGTGGGCCGGCCGCCCGGCGGCCCGTGCCGTCGCCGGTCGCCCCGCGTCAGCCCTCGCGCACCGCGCGAGACGGGTGCGCCTGCCTGGCCGGATGTACCAGTACATACACGAGGGTGGGGGATTCTGTCATGCGCTCTACTTCACGCCGTCTCGCGGCGTCTCTCGGCGCCGCCGGCCTGCTTCTGGTGGCGGGGTGCGGAGGTGACGCCGCCACTGCCTCGGCCGACGAGGAGATCGAGGCC # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTTCGAGGGGTAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 4489-4719 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZI01000244.1 Streptomyces otsuchiensis strain OTB305 NODE244, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 4489 30 100.0 36 .............................. CCGCGTACCCGGCGAGGGTGTGCTCCGGGTACTCCC 4555 30 100.0 35 .............................. CGGGGCAGGTCAGCATGTGGGAGCGGTAAGGGCGG 4620 30 100.0 37 .............................. GGGGAACCGGCGGCCCGCACCCGGGTGGAGTGCGGGC 4687 29 93.3 0 ...............G.........-.... | CGGT [4710] ========== ====== ====== ====== ============================== ===================================== ================== 4 30 98.3 36 GTCCTCATCGCCCCTACGAGGGGTAGCAAC # Left flank : AGTACCACCGGCGCCTGCCGTCAGTCGATGGCAAGGGCCTCTACTGGCCGAAGACGCACGGGCTGCGCTTCGCCTTCGACGAGCAGGCGGTGTGGCTGGTGTGCAGCGCGCACTGGTGGCAGAAGTGCCGGGACGTCAGCGTGCTGGCACAGTTCCTGACCTCGGTCCGGGAGATCGCGAGGATCTGAGAGACCCGAGACACCGTGACGACGCGTGGCAGCGACGCCAAGTCCCGTTGAACGAGAGGAGGGCAAGCGGACCACCCTCGTGACGGTGGCCCTTCGCCACGCTCGCCGCACACCGCTGATTCCCTTCCGACCCTCATCGGCCTCCCGCGCCCCACTACGATGACCACCGGCACCAACCGCCCGATCCGGCGCACGCCGGAGACTCGGATTTCAGCAACTCTCCGGGATTTCCCGCACTACCGGAGGTCCGCTGAAAAACCACCCCCACACCCGGGTAGCCACACCCGCCGTGACCTGGACCTTCACAATGGG # Right flank : CGCGATCGGCGGGTAGGGCGCCTACGTGACCGGATCAGTCCGTGAATCGGTCGTTACGGTCCTGTCCGGCGCGATGCGTGACGGGCCGGACGGTGGTGCGGGCCAGGTGTAGCAGGCGGCCGGGGTGGTGAGGCCGTCGCCGTGGTGGTGGATAGCTTCGCCGATGCGACGCCAGCCGAGCCGTTCGTACAGCCTGATGGCGGCCTGGTCCTTCACCATCACGTCGAGCACCAGACGGTGCGACGCCCCTCGGGCTGCTTCCATGGCCGTGCGTGCCAGCGCCTCGCCCAGTGAACGGCCCCTGGCGTCGCGGGTCACGAACAGCCTGCCCAGTGCGAGGAGGCGGTCACGGTCGTCGTCCTGCTGTTCCCTCCAGATGCGGGACGCGTCCTCGCCGTCCGCGTCCATCAGCGCGACGTGCCCCACCACTTGACCGTTCAGCTCAGCCACCCAAGCGCGCCGGACGCCCGGCGAACCGATCCACCCGTCCGGCTGGGCGA # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 230-21 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZI01000371.1 Streptomyces otsuchiensis strain OTB305 NODE371, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 229 29 96.6 32 ............................A CCAGGCGCGGCACTGGGAGCAGCGGCAGCGCG 168 29 100.0 38 ............................. TACCTCGCGGCGGGCGCCCACGGCCTGGTCCCGCTCTT 101 29 79.3 22 .C.CC....C..T.............T.. CCGGCTGTCGCGTCGTCCTACC 50 29 65.5 0 TG.C.T.T.............C.A.GGG. | T [39] ========== ====== ====== ====== ============================= ====================================== ================== 4 29 85.3 31 CTCTTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : TGCTCCACCCCCAGCTGCCGCCCGCCGCCCGCGTCCAGTACCGGCGGCACCTCCCGGTCGGCGCCACCCTGCTGCTGTACACCGACGGACTGGTGGAGCGGCGCGCCGGCGCCGACATGGACGCTTGCACGGAGCTGGCGGGCGCCCTGCTGGCGGCCGGCGTAAGTGACGGCCGCCCGCTGGACGTGCTGCTCCAGGACATCGTGGACGGCGTGGCCGGGCCGTCCCCGACGGACGACGTCGCCCTCCTCGCCCTCCGCGTCACCGCCGGCTCCGACTGCTCCGACGGGTCCGACGGCTGAGCGGCGGGGACGCCCGGCACCACCGTGTCCGAGGTGCGATGGTGCACGCCTTGCGTGAACTGCACAGCCCGCCGGTCGTGGTGAGGAATACTGGAAGTGGTGAGGCGGTGTCTAACCCACGGGATGGGTGAAATGTCGGAGTTTTGTAAAGTAAGTAAAATCCAGTTACTCGCCAGTTAAGACCCCAGGTCACGACCT # Right flank : CGGGGTCGGGGTGGTGTGGGG # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.26, 5:-1.5, 6:0.25, 7:-0.29, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [6.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 366-518 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZI01000008.1 Streptomyces otsuchiensis strain OTB305 NODE8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 366 29 100.0 32 ............................. CAACACCGGCCGTGCGCAGAACCTTGCGCGCA 427 29 100.0 33 ............................. ACACATTCGGTGTAAGTCGCCGCAAGCTCCTTG 489 29 100.0 0 ............................. | G [511] ========== ====== ====== ====== ============================= ================================= ================== 3 29 100.0 32 CTCCTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : CGCCCTGCCCACAGCCGCCGCCCTCCTGGACAACCTCCACCGCACCGCCGCCGACCGCACCCGGGACACCTTCGGCCGCCTCCGCGCCACCGACCCCGAACGCTTCGCCCGCGCCTGGCTGGCCACCGCGCTCTACACCGACGAACTCGACCACGCACTGTGCGCCGCCGCCTGGAGCGCCGGACCGCCCGTGCCCGCGCCATGATGACCAACGACCGCCTGCGGCTTGGCAGTCGAGCCGCTGTCATGAGGAATACTGGAAGTGGTGAGGCAGGCGACTCACCGCCAGGACGGGTGAAATGTCGGAGTTTTGTAAAGTAAGTAAAATCCAGCTACTCGCCAGCTAAATCCCCAGCTCACGCCCTC # Right flank : CCAATCACGACGTGTGCCTACGGGCAGTACATTCCAGGACGGGGGACGCGAAGACGTGCGACCGGGCACGACTCTGGCTCATGAGTACCGACGACCAGGGAGCAGCCAGCGGCTACCTCCACGAGCTTGCCTCAGCGCTCTGCGGAGTGGGGCTGACGAAACGGTACGGCGTCACGATGGCGACCTGCGCTGCTGGTGGGTGGGGGAGTACCTCGTGCGCCGGCAGCCGAGCTGCCCGCCCCCTCCGGGTGTGCGCCGTCCCCGCCACGGGCGGTGCGGATCGGGCTTGTTCCTCTGGAACGACCGGCCCTGAGCAGCGAAAAGCCCCACTGCGCGCAACATGCACGGTGGGGCTTCGGTCGGCTTCGCGGCGCGCGCTCAGTTGGTGATCTCACCGGTCTTGACGCCGGACACGAACGCGGCGAACGCACCGGCCGGGAGCGCGAGGGCTGGGCCGGTCGGGTTCTTGGAGTCACGCACGGGAACGGTGCCCGTGCTCG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2435-3344 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZI01000082.1 Streptomyces otsuchiensis strain OTB305 NODE82, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2435 29 100.0 32 ............................. TGTTCCGCCATGGCCAGGTACTCGTACGGGCT 2496 29 100.0 32 ............................. TCGACCTCGAATGGCTCTGGCTCACTCCAGAC 2557 29 96.6 32 ............................T ACGGCTGACCCACTGCGGCCTCGGAGTCCCTA 2618 29 100.0 32 ............................. AGTATCTGCAGCAGGACTTTCGGCATGGCGCC 2679 29 100.0 32 ............................. GAGACTCCCGGCGGTGTCCTGCCCGGCTCCGA 2740 29 100.0 32 ............................. CCCCTGGACGCCGGCCCCCTGGAGGCCGCCGC 2801 29 100.0 32 ............................. AGGTCGACTCTGGACATCCACCCCCGGCACGC 2862 26 89.7 0 ..........................--- - Deletion [2885] 2888 29 55.2 32 CCCNNNNNNNNNN................ AGGTCGACTCTGGACATCCACCCCCGGCACGC 2949 29 100.0 32 ............................. GAGACTCCCGGCGGTGTCCTGCCCGGCTCCGA 3010 29 100.0 33 ............................. CCCCCTGGACGCCGGCCCCCTGGAGGCCGCCGC 3072 29 100.0 32 ............................. AGGTCGACTCTGGACATCCACCCCCGGCACGC 3133 29 100.0 32 ............................. AGCTGGCCACCCACCACGCAGGCCCGTGCCAC 3194 29 100.0 32 ............................. CACGGGCTGCTCTGCAACCCCAGGACAGGGGG 3255 29 100.0 32 ............................. GCGCCCGGACGCGAATCGACGCGGCGCCGTTG 3316 29 93.1 0 .................A..........T | ========== ====== ====== ====== ============================= ================================= ================== 16 29 95.9 30 GTGCTCCCCGCGCATGCGGGGATGGTCCC # Left flank : GCTATCCGTACAGCGTCCTGTCGTTCGACGAGGGTGCCGACGTCGTGCACGCCGACGGGTTTCCGGCCGGTCATGTGATTGCCGAATCTGACGCTGTGGGGACAGCGCAGCGAGCCTATGATCTGCTCAAGGCCACTGCTCTGCCACCCGATGAGTCGGTCGCGCTGATCGACTCCGTACTCAAGGAACTGACATGACCGAGGTGCACCTGCCCGCCGCCACCGTTTGGCGCAAGTCCACCTTCAGCGGTGACAACGGTGGTGACTGCCTGGAGGTAGCCGACGGGCTTCCGTCGGTCACGCCGGTTCGTGACTCGAAGGTGCCCGGCGGTGCGGTGCTGATGGTCGAGCAGACGACGTGGTCCGCGTTCGTGGAGGCCGTGAAGTGCGGTGACCTCGCGAGCTGATCGTCTCCTACCGCACCTGGTGGTCGATATGTCGGAGTTTGGCAAAGTAAGTAAAATCCGCCCTGTGCCGCTCTAACACCGCAGCTCGGCACCT # Right flank : TGCTCGCTCACCTCGTTCGCAATGAGGGGGCAGGGGTCAGTGATCTCCGCGCGGGCCTGGGACGTCGGGGTGCGGTGTCGGTGGGTTGGTGCTAGCGCCGGGGCCTGTCCGGCGGGGACGCGGCTCCGCCGGTGTCGCAGCGGATCCAGTGGTCAGGGGCGGCGTCGGGCCTGCCGGGGACCGGGCGCTGCTCCTCGGTCCACCGTCCACCGGCGACGGCGGTGGCGACGCGTCGCCAGAAGCGCGCGGCGCCGGTGTTCCCCGGCTGGAACGCCACCTCCCACACGCCGGGCCACAGGGCCATCACGTCCTGGGCCGCCTGCTGTCCGATGCCTCGTCCGCGCGCTCCCGCCACCACGAAGAACTCGCTGAGCACGCGGGTCGGTTCGTCCAGCCCTCGCACCAGCGCCAACCCCACCGGCCGGTCCGAACACTCCAGCACGTACGGAGCCCAACCGGGGCTGGTCAGAGCCGTGTCGAGGCGGTCGCTCCGGAACGTC # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5593-5167 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZI01000080.1 Streptomyces otsuchiensis strain OTB305 NODE80, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 5592 31 100.0 38 ............................... GGCCCCAAGTACGCGTATACGCGTACGCGTGTAGGGAC 5523 31 96.8 38 ..............................A CCGCGTCCGGGCCCTGACCGCCCGCGAGCGGGAGATGG 5454 31 100.0 34 ............................... GCCACTCGCGGACGACGGTCGCGGGGGATTCCCC 5389 31 100.0 36 ............................... CGCAGGACGGCGAGGCATTCTTCGAAGAGCGCGGGG 5322 31 100.0 30 ............................... AGAGGAACACGGCGATGCCGGAGCTTCGGC 5261 31 90.3 34 ..................T....C......C AAGAGGTGGCATCTCTCGCCTGACGAGCCTGCCG 5196 30 67.7 0 .C....T..T.....C..G....G-..GG.C | ========== ====== ====== ====== =============================== ====================================== ================== 7 31 93.5 35 GTCCTCATCGCCCCTGAGAGGGGTAGCAACG # Left flank : CCACCTCCGCGACCTTCGCCACGAGCCGGAACCGGTCGTCGCCCGCGATGCGCTCCCGCCAAGCGGCGAGCAGCCCGTCCACGAACTCCCCACTGTGAGGCGCGTAGCCCACGTTCACCGAGGTGTAGCTACCACCGCGCCGCAGATAGCGCGCCAACTCCCCCACCGGCGCGTTGCGTTCCAGCGGCAGACAGCAGTGCTGCTCCCACAGCAGACGCGGCGGACTGGCTTCAGCGGATTCGTTCAACATCCCCGCATCCTGCACCTCCCCTGACACAGCCGCCATCCCATTCCGGGGAGCGGAAACGGCCCCTGGCTCCCACCGGCCGGAGAACACCGAGACCAGACCTCACCACACCGAAAGCGCTAGGCTTGTGCGGTGCCCAATCCACCCGGATTTCAGCAACACTCCCGGGTTCTCCGCACTACCGGAGGTTCGCTGAAAACCACCGCCCTCACGCAGCCTCAGCACCCCCGACGACCTGCACCTTCACAGTGGG # Right flank : GTGGCGCGTCGGCGCCGTGGGGTCAGCGACCGTGCCGAGGATGCGGGCGATGACCGGTACGACCGTCAGGACGGCTGCCAGCCCCTTGGTACCCGTCGTAGGTGCTCTTTTTGTCGTTGCGGCGGACCTCGTGCGGGCCGGCGGACAGCTCGGCCAGGTGATAGCGGTGATCGCCATCTCATCGGTAGCTCGTCGGGCTCCACCCGCCTCCACAGGATGACGATGTCGCTGCCGAGGAGACCTTGGCGTACGTCGGGTGGTCAGCGGTCATAGGGGTCGTCCGAGTACATGTCCGCCGTGGTCTCCTGCTCGGCACGGAACGTGTGGAGATCGGTGCCGGAGGCAGTCCTGGACATGGCGGCGAACTCTTGCCGGGAGACAAAGCGACCGTACCGGCGTAGAGGAACGAGCTGGCCGATCGGGTGTCCGCCGCGCGTGACAGTGAACGATTGGCCGCCCTGTACCGCGTCCATAACCTCCCGGGACCGGTTACGCAGGTC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGAGAGGGGTAGCAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 8882-8387 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZI01000080.1 Streptomyces otsuchiensis strain OTB305 NODE80, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8881 30 100.0 36 .............................. CGCCGGTCGGGGCCTCGCCGACTACCTCCATGCCTA 8815 30 100.0 37 .............................. AGCTTCTCCGTGATGACGACGCCACGGTAAAGCCGCG 8748 30 100.0 36 .............................. GTGACCAGCAGCAGCCAAGACCTGTCAGCCGCGGAG 8682 30 100.0 36 .............................. AGGACGACATCGCCGCCCTGCAGTGCGTCGCCCGCC 8616 30 100.0 37 .............................. AGCAGGCGTACGAGCTGCTGTCCGCCCGCTGCGCCGC 8549 30 100.0 38 .............................. CCCGAGCGGGCCGAGATGCTGGTGACGATCCGCCAGGC 8481 30 100.0 35 .............................. CGGATTCGTCGCAAGCGACCCGTCGTGTATCACGC 8416 30 90.0 0 .C............C........C...... | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 98.8 37 GTCCTCATCGCCCCTCAGAGGGGTAGCAAC # Left flank : CCATGCCCCGCATGGTGGGGCCCTGTCCCCGCCGTCACGTCGGCCACCGGAGGACGGAGGCGGCGTTCGGCTCGGGAAGCACTGTCAACCGTCGGATCCACGCGCCACAGACCGAGTCGCTCGCCCAGGCCGCGATCTACCAGTCACGAAAGGCCTTCCCGCGACCGAGACGCCCCCGACGGTTCAGATCCTCGTACAGCGACAACGACGGGCAGTGCGTCGAGGTCGCCGCCAACCTCGTCGCATCGCACGGCGTGGTCCCAGTCCGCGACTCCAACAACCAGGCCGCTCCGACCCTGATACTTCCGGCCGGGGCGTTCTCCTCGTTCGTGGCAAGCATGAGAGCAGGGGCCTGCACCGAAAGCGCTCCTCTCGCCTGACACCCACCGTGCCCGGATTTCAGCAACACTCCCGGGTTTTCCGCACTACCGGAGGTCCGCTGAAAACCGCCGCCCTCACTCAGCCCCAGCACCCCCGACGACCTGCACCTTCACAGTGGG # Right flank : AGAGGCGGAGCCTAACGCTCTGCATTGCTGATGGTCCTGACGCAGAAGCGGGGCCGACCGGTCTCGCGCAGCGAACACCCTTCGAGACACCATCCAGCGCCGGCCGATCCGCGAGTACCGTCGAAGAACTCGTCGAACTCGGGAGACACGATATGAGTCCTTCGCGTCGATCCGTCCTGGGCGCCAGCCTTTGCTCCGTGGCGCTGACCGTGCCGGGCTGGCCGGACGTGGTCGGACGCATGGAGGCCGTGAGCACGGGGGCGGACATCAGGATCGGCCGTGCGGACGTGGCGACGGTGTCGGCCATGACGGAGAGGCTGTCCGCGCTGGACGACGAGTTCGGCGGGCGGCACGCACGCCCCATGGCAGCGGCGTTCCTGGTGAACACGGTCGCGCCCTACCTTCGGGCCGACGCACACGAGCACGTCCGAAAAGACATGATGGGGGCAGCCGCATTCCTCTACTACCTGACCGGGTGGATGGCGGTTGACGAAGGTCTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTCAGAGGGGTAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 17099-16826 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZI01000085.1 Streptomyces otsuchiensis strain OTB305 NODE85, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 17098 29 100.0 32 ............................. GCGTCGACCGACTCACGGTCAGCCCCGATGAT 17037 29 100.0 32 ............................. GCCTCAACGTCCTGGCCGTTCTCGTCCGTCGG 16976 29 96.6 32 .........T................... GGGGGACGTCCTACTGACGTCAGTAGGACGTC 16915 29 89.7 32 ...............T.A....C...... GCCAGAAACTACGCCCCCGCGTGCCTGGCCGA 16854 29 72.4 0 ......G.....TG...C.T.C.TC.... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 91.7 32 GTCTTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : ACCCCGAACGGCCCGGCCCTCGCCTTCCCGGCCGCCGACTGGTCGTCCTTCGTCACCGCCCTCAAGCACGGACACCTGACGAACTGAGCGCCACCGCAGCCGGGGCTCCGCCGAACCACCACCGAGCGGAGCCCCGGCGCGGGCGACACGTCGCAAATTGAGCATCCCGACAGCTACTCCACACACGCGAGGAGCCAAGGCCATGCCCACACCCACCCACCCCACCTGGCGCAAGTCCACCCACAGCGGCGGCGACAACGGGTCTTGCCTCGAAGTCGCAGATGGCTCCAGCGCCAGACCAGTTCTCCGCGATTCCAAGGCCCCGAACGGCCCAACCCTCGCCTTCCCAGCCGCCGACTGGTCGTCCTTCGTCACCGCCCTCAAGCGGGACACCCTGACACGCCGAGCATCAGCCCACACCAGCGAGGCCCGAAATGCCGGAGTTTGGCAAAGTAAGTAAAATCCACACCCGCCGCGCCTAACGCCGCAGCTCGCGACCT # Right flank : CCGCTTGCAGCAAGCCGTCCGCGACGAGTGCTCCGTGCCACCTACGATTGTAGTAGGTGGCCGCGAACCTACCTCCGTAGCAGGCAAAGGGAGTTCTCGGGCTCGCATCCCCCCAGGCGAGGTGCCCCCTCGTCTTCTCGCCGCACGCGTTCGGTTCACTCCAGGGCGCGGCGCTCGTTTTCGCCTCCCCCGATTGAGGGTCCGCTGTCACACACCGCGTCACCTGGTCAGCCCAATCGGCGCTCCGACACTGCCCGCAATGCCGGTGAGGTCCCGTAGCCTGCCCAGGGCCAGACGCCAGCCCGCTTTCTCCCCGCGCAGGCGGGTGTACTTCGCCGTGGGTTGCCCTACGGTTGCCCGCGTATGGACCCATACGCGGTTTGCATCTTCCCCGCGCATGCGGGGGTGTTCCCACGCGGACGTCGCCCGACATCGCGCCGAGCGCATCTCCCGCGCACACTCGGTCCTCCATCGGCGATAACGCCGGCTTGGAGTCTTCC # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //