Array 1 7650-5435 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJNA01000034.1 Limosilactobacillus reuteri strain Lr4020 NODE_34_length_16806_cov_54.646622, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 7649 36 100.0 30 .................................... CGAACGAAAGAATAATATTTATAACGCAGT 7583 36 100.0 30 .................................... TTTTTAATGTATATTCGAGCTGGGCTATAA 7517 36 100.0 30 .................................... TCTTTTAATCCGTTGCTAGTATAGTTACAA 7451 36 100.0 30 .................................... TTTTTCATAATATCACCTACTTTAATTATA 7385 36 100.0 30 .................................... TCCATCCGCTAGAGTTAAGCGTCCGCAGGT 7319 36 100.0 31 .................................... AAGCCATAACCTAATTCAAGCATATAAGAGA 7252 36 100.0 30 .................................... AATGAAAAACCGGTCTCAAATTGCGCGTTT 7186 36 100.0 30 .................................... TGATGAGTTGTTATCTGTGTTGTACGAGGA 7120 36 100.0 30 .................................... TTAAGGCTGTATTTACATGGTTATTCAATT 7054 36 100.0 30 .................................... AAAGCATTTACCAATTTTCGTACAAGCATA 6988 36 100.0 30 .................................... ATTGATTTTAGAACAGAAGAAGCAAATCAA 6922 36 100.0 30 .................................... ACAAACGATAAACTAAACAATCCGCAACAG 6856 36 100.0 30 .................................... TTTGTTCGACACACTTATACCCTAAACCAA 6790 36 100.0 30 .................................... GAAAACGCAATATTACGACGATCATTAAAG 6724 36 100.0 30 .................................... TTACGTCCTAATATAATTACGTCCCCAGTT 6658 36 100.0 30 .................................... CAACCCCCACCGTATTAATTCCAAGCATTG 6592 36 100.0 30 .................................... AAATGATTATCGGGGGTATCATCAGCATAG 6526 36 100.0 30 .................................... TCGATGTATGTATTATATCAATATATCATC 6460 36 100.0 30 .................................... TGAAATTCTGATCGTATTACAAGGCGCTAA 6394 36 100.0 30 .................................... TAAGCTATCTAATATTATCTTTGAATTAAC 6328 36 100.0 30 .................................... AATTGCAGTGGATATTTTAAGCCATTACAT 6262 36 100.0 30 .................................... AGGTCAATGGTAATATCATTGTTTCCAAGG 6196 36 100.0 30 .................................... CGGAAGCCCCTCGCAAGCCGAAGCCCGCAA 6130 36 100.0 30 .................................... CGCCACTAATGCAGAAGCCAATTACGCTTT 6064 36 100.0 30 .................................... CAATGTGGTATGGAACTAGACGCAACTTTA 5998 36 100.0 30 .................................... AAAAGTTTTGAAAACGCTGGTAAGACAATG 5932 36 100.0 30 .................................... TTAGAGGAGAAGTAACACCATGAAAATTAA 5866 36 100.0 30 .................................... TAAGTACGATTAACATAATCAATTTTAGGC 5800 36 100.0 30 .................................... AGCGAATTTGTTCCAAGCTTCACGATTTCC 5734 36 100.0 30 .................................... ATTACTTGACTATTTGTCCCCGAATAAGAA 5668 36 100.0 30 .................................... TCAATCTCGATTGGAGCACCATTATTGTTA 5602 36 100.0 30 .................................... AGTGAAACAAGAAAATCATTGTAGGCATTG 5536 36 100.0 30 .................................... TATATTGCGGTTAATATCATGTAACGACTT 5470 36 91.7 0 ........................G.......T..T | ========== ====== ====== ====== ==================================== =============================== ================== 34 36 99.8 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAGTAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAATATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGGATTTTTATTATATTGACAAGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TACACGTAAACTATAACAATCACAACGATGATATTTTTAGATATACTCCAACCTCGTTTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAACTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATGATGGCGACAATTAAAGAAATTGCGGAAAAATCAGGATATTCACCAGCAACGGTATCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGTACCCGCAATAAGATCATGACGGTGGCTAATGAGCTTGGCTATTGGAACAACCACAAGAAAAATTCTCAGCAGCAACCAATCCGTCCTAATCTTGCTTTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTGCGCAATGCAATTATTAAAGAAGTCGATGAAGCGGGGGCGCAAGTTGAAATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCCGATTCGTTCCAAGGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //