Array 1 7365-8851 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVFP01000009.1 Streptococcus agalactiae strain S08-66 S08-66_Contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7365 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 7431 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 7497 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 7563 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 7629 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 7695 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 7761 36 100.0 29 .................................... AAAAAATAAATGACTTTAAAGCACTTGGA 7826 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 7892 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 7958 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 8024 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 8090 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 8156 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 8222 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 8288 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 8354 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 8420 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 8486 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 8552 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 8618 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 8684 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 8750 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 8816 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //