Array 1 27908-28670 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFIH01000005.1 Pseudoflavonifractor sp. An44 An44_contig_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27908 36 100.0 30 .................................... ACACGCTTTCTCGCATACACGGTTGTTGCC 27974 36 100.0 30 .................................... CCTCCAAAGAATTCCAGGAGACTCAGGACA 28040 36 100.0 30 .................................... GCACGTAGTCCTTCCCCTCTGCCTCATAGA 28106 36 100.0 30 .................................... TTTGGCCGGACTCCTTGAAGGACTGCATGG 28172 36 100.0 30 .................................... CTCAGCGCCTACATCATGTCGCTCATATCG 28238 36 100.0 30 .................................... CAAGAGCGAGAATGAGCGCACCGCAAAGGA 28304 36 100.0 30 .................................... CGGACGACATCACCGCCCATGCCATCAGCC 28370 36 100.0 30 .................................... CTGGAGGGGACAGGACTCTGGGGAGCGTCT 28436 36 100.0 30 .................................... GAGGCCATGGAAAACTTACAAAGGGCCGAG 28502 36 100.0 30 .................................... GGTCTGCTCCAGCTGGACAAAGGACACTGT 28568 36 100.0 30 .................................... ACGGGAGTGGTCCGTCACTCCAACATCAGA 28634 36 83.3 0 ..................C.......CA..GG...A | G [28663] ========== ====== ====== ====== ==================================== ============================== ================== 12 36 98.6 30 GTTTGAGAGTCGTGTTGTTTTAGATGGTAGTCAAAC # Left flank : TCTCTGATGTGGGAGGAACTGGAGGTGGAAAGTACACATCTCCAGCAGAGCATTCAGGGCTATCTGGCCCGTTTGGCGTCCCAAATTCCGGTTCCCGTGGAATATGAGGAGGGGGATGCCGTGTGGCCTCTGCTCAAAGGGTTGAAATTTCAGCCGGTGCTGGATGGTGTGTCTCCGCTGGAGCGCTTGACCCAATACCTGGAGCTGTACCATCAACTGATGCCCAGGCCCTGTGTCCTGTTGGTGGGGATGCACCTGTACTTTTCCCGGCAGGAGTTGGAGCAGTTTTACCAGATGGCCCTTTATGAGAAGTGGAATGTCCTGGTGTTGGAACCACACCAGTGCCCTCCACAGCCCCAGGAGCAGTGGTGCATCATAGATCACGATGGCTGCGAGTTAAGGGTTGATTCCCCGGGAGAAATCCCGTAAAATAGAATTGGTCAAGAGAAAACCATCTAAAACAACACAGCGCAATGTCGTGGCGTACACTCTCATTTGAG # Right flank : AAACCTGCGTGCAGCCTTTTCGCTGCACGCAGGTTTTCACTTTATTGGAACGTAGGTGTCAGCACCACCTTGCCCTCCACACACTTGACGTCCAGGGCCACAATGGGCTGGTCGTAGTGGTCGATGAGCAGGGTGGCGATGGCGTCCTCCAAATCCTTCTGAATCTGGCGGCGCAGGTTGCGGGCGCCGTAGACGGGGGAGAAGGAGGTGTCCACCAGGTAGTCCAGCACGCTCTGGTCGTAGGTGAAGGTGATGCCCTTGTTGCGCAGCACCTGGCTGAGCTCACCCAGCATGATCTTGGCGATCTCCTGGAAGTTCTCCTGAGAGAGCTGGTTGAAGCAGATAATCTCGTCCACCCGGTTGATGAACTCAGGGCGCAGGAAGGACTCCAGGCCCTTCATGGCCTTGTCCTTGGCCAACTGGGTGGGGGAGCGGTCAAAGCCCAGAGAGCCGCCCTTGACGTTGCTGCCGGCGTTGGAGGTCATGACGATGACGGTGTT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTCGTGTTGTTTTAGATGGTAGTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 19188-31307 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFIH01000027.1 Pseudoflavonifractor sp. An44 An44_contig_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================== ================== 19188 33 100.0 34 ................................. TTACTAGCTTTCAGCGTAAGAGGGAATAGAGGTA 19255 33 100.0 35 ................................. TGCATCAGGCAATCCACTGAACTACACGAAAACGA 19323 33 100.0 37 ................................. CTGAACACCAAAACCGTGCAAGACGAACTATGGACGA 19393 33 100.0 35 ................................. ACTGATGCAGAGTTGGACGGTGTGGTGAAAAAGAA 19461 33 100.0 33 ................................. AATTATGCCTTAACAGCAAAAGACCGAAAGTCG 19527 33 100.0 33 ................................. ATAATCGCCTCGGTCAGATCGCAAATGAAGTAA 19593 33 100.0 34 ................................. TGGTTTGGGAAGAAACCGGTGACAGCACGGAAAG 19660 33 100.0 34 ................................. AAATCTGTGGTCAAGCCAATACGACGGGCATTGA 19727 33 100.0 32 ................................. TCCTTCCAGTGGGACGGATTGATTATCCGGGC 19792 33 100.0 36 ................................. CGCTCTGACGTGGCCAAGGCTCTGGGCTCCAATGGG 19861 33 100.0 35 ................................. ACAACCAGCGGGCTATTAGCGAACGACGTGTGCAC 19929 33 100.0 38 ................................. TCCGAGGGCTGGGCGGTCTCTCCCACCGTCCAAATCTC 20000 33 100.0 34 ................................. GGTAGTGGAACTGGAAGCAGTCGAGTCCATGGTC 20067 33 100.0 34 ................................. ACAATCACAGTGTTCATTGGAATACAGCCCCCTC 20134 33 100.0 35 ................................. GGGGAGTGGGTAAAGACCAAGACAGGGTACTCCCA 20202 33 100.0 35 ................................. TTGCCCACCGTCACCTCCCCGTCGGTGGTGTCTCC 20270 33 100.0 33 ................................. CGCCCTCCACAATGGCCTGCTTAATGTGGATGG 20336 33 100.0 35 ................................. CTGCAGAGGAGCGGGAAGAGTTTGCCCGGGAGAAC 20404 33 100.0 37 ................................. TGGTGGCCGTGGTGGCTGTGTGCGCCTTTGCCATGGG 20474 33 100.0 35 ................................. CCCGTGTCAGAGGATGATGCACTAAACAATATATG 20542 33 100.0 34 ................................. CACACTCCGCCACCCGGATTACCGGGGTTGTCAA 20609 33 100.0 35 ................................. TTTGTTTTGCTTTGCGGCAGAAATCCTTGCCAAAA 20677 33 100.0 36 ................................. GTGCCGCTCATGCCCTCCAACGCCATCCGGCGGATG 20746 33 100.0 35 ................................. CTGCGGGACTTATACAAGACACTCCTGTCCACATA 20814 33 100.0 35 ................................. CGAAGGCTCCGGCGAATCTCCATGCACTTGCACGG 20882 33 100.0 34 ................................. TCAATATGTGGGATCACATCAACACACATCCCGT 20949 33 100.0 34 ................................. CTGGGTGAGTGGGCGGCCACAGTTTGGGCAGAAG 21016 33 100.0 34 ................................. GCCTGGATTCTGCTGTTTGCCCTTTTCGGCGGTG 21083 33 100.0 33 ................................. GGTGCGTTGGTCACGGCGACGACCTAAAAAGCC 21149 33 100.0 35 ................................. TGAAAGACCTTCTCAGCCCCCGCTCCAGTTGCCGC 21217 33 100.0 37 ................................. GACATGATATGGCAAGATGCAGTTGTCCCGGCCATGG 21287 33 100.0 36 ................................. TGTGAGGTGACACATGGAAGTATTGGTTATCAACGG 21356 33 100.0 34 ................................. GCTTGCGTCAGGTGACTTTATACGCACCCAGGAT 21423 33 100.0 36 ................................. GCAAACTCTTGGGCACTCAACATTTTATCACCTCCG 21492 33 100.0 35 ................................. ATCAAAATCCCTCCCATCAAACCCGCTCAAATCTA 21560 33 100.0 35 ................................. TCTTTGTCCGGTGTAATCTTCCGCACCGATACGAT 21628 33 100.0 34 ................................. AATCCACCTCACAATCTCAAATATCGCCAATCCC 21695 33 100.0 34 ................................. AGGCCAGTGCATCAGATCCGCCCCGCTCGCTTTG 21762 33 100.0 37 ................................. TTTGACAGTGAATTTACCGTCGGCGCAGCTGTCTCCC 21832 33 100.0 36 ................................. CGCAGGATGCGGAATGTTTTACCGTTAAACTACCGC 21901 33 100.0 35 ................................. GACTTCTCCACGTCCGGCACGGCGTGGAACGGCGG 21969 33 100.0 34 ................................. CGGTCGACTACATCATTGACCACGACTACCGTGG 22036 33 100.0 35 ................................. ACGGACGAAATGAAGCAGAAATACCTTGAGTGGTG 22104 33 100.0 35 ................................. ACTCACTGGCCGAAAATGGGGGCAGGTGTATATTC 22172 33 100.0 36 ................................. TCACAGTACACGGATATGCCTGTTGCCATGAGGCTG 22241 33 100.0 35 ................................. GTTGGTAGGCTTGACGGGGCCGAACAACGGACAAC 22309 33 100.0 34 ................................. ACTCACTGGCCGAAAATGGGGGCAGGTGTATATT 22376 33 100.0 34 ................................. TGCTTGGCCTGTCCGCACCCGGAAGAGCCGTGCA 22443 33 100.0 33 ................................. GAATCCCACCCCCGGCTCCACGTTCCAACCCAA 22509 33 100.0 34 ................................. AATCAATGGCGCAACAAATCTTACAGGACGAAGC 22576 33 100.0 34 ................................. AATCGGCTGAGAATGTCGTCCGCCATGTCTTGGG 22643 33 100.0 35 ................................. AACGGCAACTGCGGCGGCGGCCTGTTTGGCGGCAA 22711 33 100.0 35 ................................. TGGTTTGGGAAGAAACCGGTGACAGCACGGAAAGC 22779 33 100.0 34 ................................. TTCGGCCTGGACGACCCTGGGAAGATAAAGTCCA 22846 33 100.0 37 ................................. AATCAATGGCGCAACAAATCTTACAGGACGAAGCAAA 22916 33 100.0 35 ................................. ACCGCAAGATAAAGGCCGGAGAGGTAAGGGAGTTC 22984 33 100.0 34 ................................. TCACAGTACACGGATATGCCTGTTGCCATGAGGC 23051 33 100.0 35 ................................. CAGTGTGATTACACCGACCAGATACCCAGCAGCGG 23119 33 100.0 34 ................................. CCCTCTGTCTACCATGCGTCAAGCCATGCTGGAG 23186 33 100.0 34 ................................. TGCATTGCCAAGATGGTGGGCACAGCCCCCCTCT 23253 33 100.0 36 ................................. TCTTGAAAAAATGTAAAGCTAGCTTATATAAAGCAG 23322 33 100.0 36 ................................. CCACAATTATCCAAAATTTGCCCCAGATCATAAGTC 23391 33 100.0 35 ................................. ACAAGTGGAGCGAAAAGGCAAAAAAGGAGATCCTG 23459 33 100.0 34 ................................. TTGCCAGTGTAGTGGATATTGAAGGGGATCTGAT 23526 33 100.0 33 ................................. AAAACCGAAACCCCGCCCCCGTTCGCAGCTGGA 23592 33 100.0 34 ................................. GTATGACTCCGGGTCGCTCCAGCAGATAGTCGGG 23659 33 100.0 36 ................................. GTATAGGTTGGATTTGTTGAGGCATGGCAGGCGAGG 23728 33 100.0 33 ................................. GTGTGGTCGGTGGAATGGTCGTCCACCAGTTCA 23794 33 100.0 33 ................................. TGTAATGGTTGTACAGCCTCATTGCGGCTGGCA 23860 33 100.0 35 ................................. ATCGGAGCATAATGGATATCGCAATAGGATTCCCC 23928 33 100.0 33 ................................. CGAGATGGGGCCGGACTTGATGGCATCGGGAAG 23994 33 100.0 33 ................................. CCACAATTATCCAAAATTTGCCCCAGATCATAA 24060 33 100.0 34 ................................. TCCCAAGCCTGTCCAATCTGGCGGAGGCGTTTGG 24127 33 100.0 34 ................................. TGTAATGGTTGTACAGCCTCATTGCGGCTGGCAT 24194 33 100.0 33 ................................. ACCGAGGCAAGAAAAGAGCACCCCGCCGTTTTT 24260 33 100.0 34 ................................. GTTGCCGCCCTCAGTGTACAGCAGACAGCCGGAG 24327 33 100.0 34 ................................. AATCATCCAGCGGTAAAGGTTGAGCTGGGCAATC 24394 33 100.0 33 ................................. GGGACTGATTAAGTCCATTCCCACAATTATCCA 24460 33 100.0 35 ................................. TCCAGAAAAAAAGAGGAAGAAAAAGAAAGGAGGGT 24528 33 100.0 33 ................................. CCATCCTCACCAGGCCTTTTCCCAACTGCCAGA 24594 33 100.0 34 ................................. ATGGCCTCGGAATCAATCCGACAAGCACAACCAA 24661 33 100.0 35 ................................. AAGCAGAGCCTTGATCCCTGCATACTTAGCCGTGA 24729 33 100.0 35 ................................. CCCTGTCGTCCTTTTTTGTGATGCCAGTCTCAAAA 24797 33 100.0 35 ................................. CTCAAGGCGGGGAAGGTCCAGCTGGCCTGGGGCTC 24865 33 100.0 35 ................................. ACCGCTTGTCCAATTAAGCTGGCCACCGTATACTG 24933 33 100.0 33 ................................. ACCTCCCCACACCATCAGGCCGCACAGGCCAAC 24999 33 100.0 34 ................................. CGTCCGAGGCCACGGCGCAACCTGGAAAGGTTTA 25066 33 100.0 35 ................................. GCCGTTGGTTGTGCTTGTCGGATTGATTCCGAGGC 25134 33 100.0 34 ................................. ATCAAGCTTATTGGCAAAAATTATTTGGAGGAAT 25201 33 100.0 33 ................................. TGATGAATAGGAGGAAAAGAACATGATTGACAA 25267 33 100.0 34 ................................. TATGAAAATGACTGACGGAAAGCGCACCATCGAC 25334 33 100.0 40 ................................. TCCCTTGCCAGTCAGCATGGAGAAGTAGACATAGGGCACA 25407 33 100.0 34 ................................. CGGGAGCCTGTGCAGATTGCCCGGCGGGCCCCGC 25474 33 100.0 34 ................................. CTTATGAGGATATCACCATGGCCATGCGCTGTGA 25541 33 100.0 34 ................................. AGGCCCGCATGCCCAGCATCCAATCCGCTATGTC 25608 33 100.0 33 ................................. TAAAGCAACTGTAGAGATAACAGGGCAGACTCC 25674 33 100.0 35 ................................. TTCTCCAGCGTCAAAGCCTATCACGATGGTATATA 25742 33 100.0 35 ................................. CGGCACTCCACAACTGCACCAGATCACTGACCTGG 25810 33 100.0 34 ................................. TCAACGAGACGAAAGCTGTGGCCCAGTCCGTCCG 25877 33 100.0 35 ................................. GAGCGTCTGGCCCTCGCTGACCAACGACTCGCCGG 25945 33 100.0 35 ................................. CCCGTGTCAGAGGATGATGCGCTAAACGATATTTG 26013 33 100.0 34 ................................. GCCGAGAGAACCGCCAACATGAAACTTGCAGACC 26080 33 100.0 34 ................................. TTGCGTGGACACGGCATTAAGCAATGGGACTTCG 26147 33 100.0 35 ................................. CACCAGCTGACCAGGGCGGCCACGATGGTGAACCC 26215 33 100.0 35 ................................. AATCTCCAGAACAACTATGGCTATGCCCAGAAGGT 26283 33 100.0 34 ................................. AATTCTGAGGCCGTACACCTTTTGGGTGCCGTCC 26350 33 100.0 35 ................................. AAACCAACACTAGCACTGCCAGGGATATGCTCAGA 26418 33 100.0 33 ................................. TCAGCCATGGCGCACACAGCCATTTTGTGGCCC 26484 33 100.0 35 ................................. TGCATTGCCAAGATGGTGGGCACAGCCCCCCTCTA 26552 33 100.0 36 ................................. GCCGCCTTTTGACGGTGGGAGCGTTCGGCCTCGATG 26621 33 100.0 35 ................................. TTAGGCCCGTAGTATGTGCGGACATCCAGGTACAC 26689 33 100.0 33 ................................. GTGCCGCTCATGCCCTCCAACGCCATCCGGCGG 26755 33 100.0 35 ................................. CTAGCCCCCGAAAGGGGGCGCATGGAGTGTTACCC 26823 33 100.0 35 ................................. ATCTGCTCCGGCGTGAGCAGTGCGGGGCGGGTGTT 26891 33 100.0 36 ................................. AGGGAAAAACCTTTTTAACATTTCGGGGGATATAAA 26960 33 100.0 35 ................................. GTGGTTCTGGAGTATCTTGATGTTTTTGCAGACGT 27028 33 100.0 35 ................................. GCCGCTACGGCAATCGAAAACTTTGGCATGTCCAC 27096 33 100.0 36 ................................. TTGATGGTCAGGCGGTTATCAGGCCCGATGGTGCGC 27165 33 100.0 33 ................................. GGTGAAGCATTCATCAAGCCATACCCATCCGGT 27231 33 100.0 34 ................................. ATTGCGGCGGCCCACGGCGGCAACATGATTATCA 27298 33 100.0 34 ................................. CGTTTCCTCCAATCTCTTAATCTGCTCCGGCGTG 27365 33 100.0 34 ................................. TGCTGGGACTGCCCAGGGAGCTGCCACCACGGCC 27432 33 100.0 35 ................................. CGGCCCAAGACCTGGAGTTCCCCATGCCTATGGAT 27500 33 100.0 33 ................................. TTTAACTCCAATATCAACCCGGAAGTCCCTGTT 27566 33 100.0 35 ................................. AGGACATCAGCGGCTCCGGCAAGTACATTGGGGCA 27634 33 100.0 34 ................................. TGACTGAGCAGTTCGGCCCGTGCGGAATCGGCTG 27701 33 100.0 35 ................................. TCGTATCGACGCACTGGAGAAAGCCGCAATGGGGG 27769 33 100.0 33 ................................. ACGTCAAGTCCACCGTTGGCGGACAACAGTTTA 27835 33 100.0 34 ................................. CTGACTGGGTGCCCGGCATTGGCGGGAACCGTTT 27902 33 100.0 32 ................................. TGCTGGGACTGCCCAGGGAGCTGCCACCACGG 27967 33 100.0 34 ................................. ATCAATGCGGACGCCACAGGCAGTTCGCCCGCAT 28034 33 100.0 35 ................................. GAGTTTAAGACCGGGGTTGAGTTTGGCAAACGCAG 28102 33 100.0 34 ................................. TAAACAATTTTATACTGCCAGTCGTTGGGTGGTT 28169 33 100.0 34 ................................. TTTTGTCAAACTTGCCAAAAAGAACAAAGACATC 28236 33 100.0 33 ................................. TCTTTGAGCCGCATGGGCAGGAACAGGCCTACC 28302 33 100.0 34 ................................. TGTCAAGTATGGCATGGTGTACACCATCGAGGGC 28369 33 100.0 33 ................................. TTGAGAAACGAGCTGGACCGCCTGCCGTTCGAG 28435 33 100.0 35 ................................. TCCTTTCTGGCGGTTATTGCCCAATAGGTACAGGT 28503 33 100.0 36 ................................. CTTTGTCTGATTCTACCGGCCGAGCGATTTATAATG 28572 33 100.0 34 ................................. TTGTATCTATGCATTTTAGCATACGTATCATAAC 28639 33 100.0 34 ................................. TCTGCGTGGGTTGGGCCAGTCCTCACCGTCTGCT 28706 33 100.0 37 ................................. TCTGCGTGGGTTGGGCCAGTCCTCACCGTCTGCTGGA 28776 33 100.0 36 ................................. CCGTGGTCACACGGGGCGGGATGGAGATTCCCGGGG 28845 33 100.0 35 ................................. AAAAGCCCCGCAGCGGTAAGCTGCGGGGCTTTGTC 28913 33 100.0 35 ................................. ACCTCGTAAATTTTAATTAACCGCGAAACTAAAAG 28981 33 100.0 36 ................................. CACCACGGACAACACTTCATTGGCAATGAAGGCAAT 29050 33 100.0 36 ................................. GGATTGCACATCCTCCAGGGTGCGGGTGTCTACCTC 29119 33 100.0 34 ................................. CGCCGCTGGTCTTTGCGGCGGAACACGGGCCCAC 29186 33 100.0 35 ................................. GGCGTTGAGCCGGGGCCATTTGCCACCAGCTGGAG 29254 33 100.0 34 ................................. CGGCCCAGGACACTCCAGCTGGAGGACTCTGAGC 29321 33 100.0 36 ................................. CGCCACCCTGTCGGGCGGCCCCCAAATGGATGGGCC 29390 33 100.0 36 ................................. CGCACGGGCCGAACTGCTCAGTCAGAACCTTCAACC 29459 33 100.0 36 ................................. ATGCTCACCTTGTCTTTGGTTACGCCTGCACGATAC 29528 33 100.0 34 ................................. TGCTCAGTCAGATCATAAGATATAGCAATGTCAG 29595 33 100.0 36 ................................. CCCGATCAGATGCTCATGGACATCTGGGGGTATACC 29664 33 100.0 35 ................................. CATCGCTGGAGAGCAGCGGTGACCCACTGCGTGGC 29732 33 100.0 33 ................................. CTGCTCGTGGCGGGCCAGTCTTTGCCGGATGAG 29798 33 100.0 35 ................................. CGTTCGGGCCCCGGGCGGCTCCCCCGCCCGGCGTG 29866 33 100.0 34 ................................. TGAGATCTTAGACGGTCGGTGATCCTGGCGGCGG 29933 33 100.0 35 ................................. GTCCCGAGGCGGGCCGTCCTTTGGCCCGCCTGTCC 30001 33 100.0 35 ................................. TGCACCATGACCAGGACTTGCCTGCCTGGTTGCAC 30069 33 100.0 34 ................................. TTTTCAGTTCCAGGTCTAACGCACGGTTGAAGTG 30136 33 100.0 35 ................................. AGCATTTGCATGACCTTGTAAACATTCATGCCGCC 30204 33 100.0 34 ................................. CCATCTGCTTCTCAGCGATCAGCCACCAGCTGTC 30271 33 100.0 33 ................................. CTCGGCATCCACTCCCCATCAACCGTGTTTGCC 30337 33 100.0 33 ................................. TTATGCTGTTCAGGCACAATAATCCAGCGAAAC 30403 33 100.0 34 ................................. ATATCAAAGACTCCCAAATGTCAATTTGCCACCG 30470 33 100.0 37 ................................. TTATGTTGCTCAGGAACAATTAGCCAACGAACCCCCC 30540 33 100.0 34 ................................. CGAAAATCACGCTTATATTTCAGAGCCTTCCCCC 30607 33 100.0 34 ................................. ATTAAAGAATCAAGCCCGTTATACTCAACAACCT 30674 33 100.0 34 ................................. TGTCTGGCGGTTAGATAACCGTACCCAAAATTAA 30741 33 100.0 34 ................................. AGCGGGCAAGGATGGTGGGGCAAGCACAACAACA 30808 33 100.0 34 ................................. TTCCAATCGGCCGGGCTCAAAAACCCGGTGACCG 30875 33 100.0 33 ................................. TCCATCAGACGGTGCAAAGTGAGCAGGGCAGAG 30941 33 100.0 34 ................................. GTGGAGCGGCCTGGAGCTGCAAGCGCAGTTTTCC 31008 33 100.0 33 ................................. ACCGGGGCGGTAGAGGCCGTCTATGACGGCTCT 31074 33 100.0 33 ................................. CTCCTCATATTCGGCCAGGATCTCCCGGTCCAG 31140 33 100.0 34 ................................. ACGCCTTTGTCTCCACGGGTGAGCAGCTGCTCCT 31207 33 100.0 35 ................................. GTTATCATCAAGGCTACCGAGGGAACCCCCCTGGT 31275 33 84.8 0 ........T..TG............G......C | ========== ====== ====== ====== ================================= ======================================== ================== 180 33 99.9 35 GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Left flank : GTACCCACCGTTTCTCTGGAGGTAGAAACATGCTGGTTCTGATTACGTATGACGTGAATACCCAGGATGCCGCTGGGCGCAAGCGGCTGCGGCAAATCGCCAAACAATGTGTCAACTACGGACAACGTGTCCAATGTTCTGTGTTCGAGTGCCTGCTGGACGCTGCGCAATGTCGCATGCTTCAGGCCAAGCTGTGCAGCATTATGGATGCCGAGAAAGACAGCCTGCGTTTTTACTACCTGGGCAATAAGTATGAGAGTAAAATCGAACACTTCGGCGCCAAACAAACCTATGAACCCGAGGGTGCGCTTATCTTATAGGTTTGCCAGGTGCGAAGGGGAAGCTCTCATAACATCCCTGGGAGGTTCGCACACACATTTTTCCAGTTTATGTGAGGAGTAGAGATTTTCTCACCTCCGCAATTGTAGCACTTAGAATTTATACTGTGTAATCTGTGCAAGGAACACAACGATTCACCTCGTACCTTGTATAGATTTGCT # Right flank : CATCGTTACCTATGGGCGGATGATTGAACTATATCTGCTCTTTCCATTCTCTGAACTCGTCTCTTCTTTTCCCCGTATAAAATATCCATCGAACCTCATCGAACAATAAAAAATATCCACCCTCCCTGTGCTGCATGAAAGCCACCTGCTTGGAGATACTTACATACAGTATCTTCCAAACGAGGTGGCTTTTTGTGCAAGGTAAGGTGGACTTATGCGGCGTGAACACGTCGAAACTCAAGGTTCTGAAAAGTGAAGAGAGCATCGCCCTGCTCCGCCGGGCCCGACAGGGAGACCAGGCAGCCCGAGAAGAACTGATTGCCGGGAATCTGCGCCTGGTACTGTCGGTAATTCAAAAGTTTGCCGGCCGGGGCGAACACATGGACGATCTGTTCCAGGTGGGGTGCATCGGCCTCATCAAAGCCATTGATAACTTCAATGTGGACTTGGACGTAAAGTTTTCCACCTATGGGGTGCCCATGATCATCGGAGAAATCCGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //