Array 1 83819-82990 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RJOC01000007.1 Streptococcus mitis strain BCC44 D8841_contig007, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     83818	    36	 100.0	    30	....................................	AGATTCAGCAGGAGGACTTGCTGATAATCT 	
     83752	    36	 100.0	    30	....................................	TGTGCTAGAGTGGAACTGATTCGTATTTGA 	
     83686	    36	 100.0	    30	....................................	CAAATTTTGGGCAAGTGCTCATGGAAAACA 	
     83620	    36	 100.0	    31	....................................	ACACCTGTCGGTGTTTATACGGATCATTGGG	
     83553	    36	 100.0	    30	....................................	TCACGATCAAGGCGCATCCTCATCGTAACA 	
     83487	    36	 100.0	    30	....................................	CCTTAACGATAAAGAATTGCAAGATTCTTA 	
     83421	    36	 100.0	    30	....................................	TGGACCTGGATTTGTAAGACATAATAGCAG 	
     83355	    36	 100.0	    30	....................................	AAACTTCGGCAAATTTATATACTTTGTTTA 	
     83289	    36	 100.0	    30	....................................	CTTGTTACTTATCAATTCGGAGGCCTTCAA 	
     83223	    36	 100.0	    30	....................................	CAAGAGTCAAATCAAGTTGTCCATATACAT 	
     83157	    36	 100.0	    30	....................................	GTTCTTTGCCCGTTTTTGTCCCTTTGCCAT 	
     83091	    36	 100.0	    30	....................................	AGAATCTTATAAATCCATTTTTCAAACGGA 	
     83025	    36	  94.4	     0	.................................CT.	|                              	
==========	======	======	======	====================================	===============================	==================
        13	    36	  99.6	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   ATCAGCTCAATGACAAACCAGAAGTCAAATCCATGATTGAAAAGTTGGTTGCTACGATTACAGAATTGCTAGCATTTGAGTGTTTGGAAAACGAACTAGACCTAGAGTACGATGAAATCACCATTCTAGAGTTGATCGATGCGTTAGGGGTCAAAGTGGAAACTCTAAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTCTCTAAAAAGAAACTCCTTGTTTTCATCAATGCATCCGCCTATCTATCAAAGGATGAGTTAGTAAATTTGATAGAGTATATCCAACTCAATCAACTGTCCGTCTTATTTGTTGAGCCTCGGAAAATCTATGATTTTCCTCAGTATGTATTGGATCAAGACTATTTCTTGAGCCCCGAAAATATGGTATAATAAAAGTAACAATTGGGACCTGACGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG
# Right flank :  ACATTAAAAGCTACTCATTTTTTAAGTAGCTTTTTTCTTATTCAAGTTTACATATTAGTCGTCAAAACCCCATTCCCTTGTAGAGAAGTAAGACTGCGAATCCTACGAACAACACTACCGCTACCAGTCTCTGACTAGCGCTATACATCCGTCTTTCACCTTGGACTGGAAAGATGACTGCTAGAAATGCTCCGCCGACTGCTCCACCGATATGGCCTGCTAGGCTGATTCCTGGAATCAGAACACTTCCAATAATGTTAACCACAAAAAGTGTCAGATAAGATTTCCCTAGCTGTTGGATATAAGGATTACGCGTTGCATAGCGAAGAACAATAATCGCAGCAAATAGCCCATAGAGAGAAGTAGAAGCTCCTGCTGCTAAGGATTTGGGACTAAATACAAAAACAAAGAGATTGCCCATCATTCCTGATAAAAGATAGAGAAAGAAAAACTTCTTGGATCCGAAAATTTCCTCTACTTGCCTACCAAGATAATAAAGG

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//