Array 1 24698-25460 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJNB01000041.1 Corynebacterium flavescens strain NBRC 14136 sequence41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 24698 36 100.0 37 .................................... TAAGAAAAAGACCACGCCTAAAGTCACTCCTGCTAAG 24771 36 100.0 38 .................................... CCTCCGCTCGCTGCGCCTCCTGAACGTCACGCTCAGCC 24845 36 100.0 37 .................................... CGACCCCGGCAGGAGTGGCGCCACCAACCACTACTTC 24918 36 100.0 35 .................................... CCGGCTGGGTGAGGCTAAGGCCGACCGGAAGAATG 24989 36 100.0 36 .................................... GACGGGGGGCGGTAATGCACCTCTATTTGCAAAAGG 25061 36 100.0 36 .................................... TCTTCTCTCAGTACTTCTTCATCTCCTACCCCCCAC 25133 36 100.0 39 .................................... TATATCGTACTATGCGTGTCTAGTCGAGGGGGCAAACAA 25208 36 100.0 36 .................................... GAAGGCACCGCCGCCATCGTCATTAGCGGCAAAAAC 25280 36 100.0 38 .................................... GTACACGCCGTCACCCGCAAAACACTCGTCGCCGCCGT 25354 36 100.0 36 .................................... CTCTAGCGGAATTGGCAAAGAAAGAATGTACCTATC 25426 35 97.2 0 ...................................- | ========== ====== ====== ====== ==================================== ======================================= ================== 11 36 99.7 37 GTCACCGTCCTTTCGAGGACGGTCTTTCATTGAGGC # Left flank : ATTCGATGAGCCGCGATGATGCGCGTCGAACCCTTATTTGTTACGACGTCACCAACGACAAGCGCCGGACTCGACTGGCCAAGTTATTGTCCTCGTATGGGGATCGAATACAGTACAGCGTGTTCGTCACCGATATTTCGCCCGCTCGCCTCCTCCGGCTAAAGGACGAAGCGAATGCCAAGATCGACAGTGCCGAAGATTCCATCCTCTTCTGCGATCTAGGCAGAGTCTCAGAGCTCTCAGACAAAAAGTTCAGCTACTTAGGGCAAACTAGAGAAGTCTCCGATAACGACGTGCTTATTCTCTAAAGCGGTAGGATTGCTGCTGCGAGCGCGATGATAGGACGGAAACCCCTGAACGCACTCGCAAGGCATCAACGCTGGTAGCTGTGTGAAAACTCGATAGAGAGCAAGATAAGCTATATTGAAAGCTAGCCTCGCGAGGTAGCGCTCGCAAAAGGCCGAAAATGGCCTGCTTATAGCACTAGTTTTTTGGGTGCT # Right flank : | # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCGTCCTTTCGAGGACGGTCTTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 38-1085 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJNB01000068.1 Corynebacterium flavescens strain NBRC 14136 sequence68, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 38 36 100.0 35 .................................... TAACGGCTCCAGCGCCGCGCCTAATGAGACGCGCG 109 36 100.0 33 .................................... ATCAACGCCGCCGTCCAGTTCTTCGCCTACGAG 178 36 100.0 36 .................................... GACAGCGAAAGGCACCGCGTGGCGCGTCATCTATAA 250 36 100.0 38 .................................... CCACAACGGCACGGTCGGTGAGGTGGTCGGGGTCGTAA 324 36 100.0 37 .................................... CAGACCCAAGCAGCCTAAGCCCACACCACAAGAAAAG 397 36 100.0 33 .................................... GGCCGGTAGCTCCAGCCTTGCCACCATGGCAGC 466 36 100.0 36 .................................... CAACAGGCGCAAGATCTGGTGGACATCATCATTGAC 538 36 100.0 35 .................................... CCGCATCCTGGTACGCCAAGAGGGACAAGCGACCA 609 36 100.0 39 .................................... ACCGCTAAGATGGTCAACCGTCCCGAGGGCCTAATCCAA 684 36 100.0 37 .................................... ATTGGTGATATGGCGCACGCTAACCCGTTCTTTGCCG 757 36 100.0 36 .................................... CCGCCATATGTGTATCTCGATGCTGTCTCCTCGTGG 829 36 100.0 39 .................................... GCCTGCACACATTCCTCGACTACCTGCGCAGGGTGTCCG 904 36 100.0 39 .................................... TTGCGTGTGCTGCGCCCGGATGGCTCAATCTATTCTGAG 979 36 100.0 35 .................................... AAGCACGCACGAACCGCAGTAGACCCTAACCGCTG 1050 36 88.9 0 ..A........C...G.................A.. | ========== ====== ====== ====== ==================================== ======================================= ================== 15 36 99.3 36 GTCACCGTCCTTTCGAGGACGGTCTTTCATTGAGGC # Left flank : CCTGCAACGCCCAGTCGCGGGCGAGGGTGGAATTAAGG # Right flank : CCACGGCGAGCCTGCTCGTTGGGCGGCTGTATGCTCGGGTCGTCGTCCTTTCGCGGACGGCCTCTCGTCAATGTCTAGGTAAATGAAGTTCGTGAGAGGTTCTACCTCAAACTGGATGACTTAGATCAAGCAGTCCCCCAAGCAGCTATTGATCGTGAGCCTAAGTTCTATGGAATCGGCATCTGCCGAACCGGATGGGTTAAGAACTTAAGCCGGGGATTGTACGAATTCCGAGTTCGACGCACTCTTGGGGTGATTCTTGGAAGGGAGATAGCCCTTGACAGAATATGTGTTAAAGCACATAATAAAAGCTAGCAGTCCAGAGGGGAGACTCCATGCCCACCAAGAGTTTTGATTCGATAGCCAGCAAGGCCCGCCAGAACTGGTCCCAGCAAGCGCACGATGTCTACGAGGCCAGCTCCGCAGCATTTTCCGCTGAGGTGGCGCAGCGAGCAGAACTTGGCAGCCAGCTCCTTATAGCGCGCAAAGCACGCGCTCTA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCGTCCTTTCGAGGACGGTCTTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [21.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //