Array 1 42657-41750 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOIO01000049.1 Natrialba asiatica DSM 12278 contig_49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 42656 37 100.0 36 ..................................... GAGACGGGTTCGGACTCGGCGGCGGTGACGGGTTCG 42583 37 100.0 36 ..................................... GATCGAACAGGCCCTCGCCGAAATCCGCGGCGAAGG 42510 37 100.0 36 ..................................... GACGATCGCCAGGACGACTGCCGGGTTGTTGTGCCC 42437 37 100.0 36 ..................................... TATAAGACGCGCAATGATAAGTTCAACTTCCACGGT 42364 37 100.0 34 ..................................... ATTAGATCTCCGAGGCGGTTGCTCGTGCTCATTG 42293 37 100.0 35 ..................................... ATGAGGTCGAATCCCTCGAACCGTACCACTATATC 42221 37 100.0 35 ..................................... TCCGCTATCGCTATCTCTGGCGGGTCTCCGGTCGG 42149 37 100.0 35 ..................................... GCAAGGACTCGTGGGAAGAAGGTTCAGATTACAAG 42077 37 100.0 35 ..................................... ATGGTGATATTGGTGCAGTTGTCATAGAACCGGGA 42005 37 100.0 37 ..................................... AAAGCGAGTTGTTGTTCGGTTCCATCCGCAGCATCGA 41931 37 100.0 37 ..................................... ACCGACGCGCCCGAAGGAGCCTGGTCGGAAAGGTCGA 41857 37 94.6 34 ......................C.C............ AGATAGTGCCCGACCAGCATCGTCGAGCAGTTCG 41786 37 83.8 0 ....CGAC..............C.A............ | ========== ====== ====== ====== ===================================== ===================================== ================== 13 37 98.3 36 GTCGAAGTGCGGTAGAAACCCAGATCGGGATTGAAAC # Left flank : GCACTTCGAGTACCGCGTGAGCCGTCGAAAAGCGATCCGACAGCAAGTGATCCTCTTGCGGAAAGCGATCACAGGTGAACTCGACGACTACCACGCACTGGAGGTGTCGCGATGAGACTCGCAGTAACGTACGACGTCAGCGACGATACGAATCGTCGGCGTGTCTACCGGACGCTGGAACGATACGGGGCGTGGCGCCAGTACAGCGTCTTCGAACTCGACGTCTCGAAGAGCGAGCGGGTCGAACTCGAAGACGAACTCGAAGGACACATCGAGCCGGCGGACGGAGATCGAATCCGGCTGTATCGGCTCTGCGAAGCCTGCCAAGAGGCGACGACAGATCTCGGAACCGAACCACCAGACGAGCAATCGAACGTTATCTAACGTCGGTCTTCGTCGACCTTTTTCAAAGCCGTGTATAGCAGGGGTCCACGAGAGCGGGCCGCGCCGTCGTGGGTAGAGCAAGGTTTATAGACCCGCTCAAGCAAAATTCACCCCCT # Right flank : CGGCAGCACCTTGCTGTTGGACCGCGCCCGAGGCGAGGTCGTGAGTGTTTCGTGACCGATGCCATCATGTGGTGTTTGAGTCGAATTTTCCCTCAAGATACTGCTCACCGAGATCAGTGATTCGTAGTAAATTCTTCGGGACACTCGGCGAACCATATCTACATTAATTGTTGGACCGTTTCGCCACTTTCCGCCAGCACAGGCTGTTTTGGTGGAGTATCGGGTTCAGTCGTGGCAAATGACTCAGCTGAAACAGCCTGTTGCATCGCAGTCAGCTTTGATCTGAGTTGGCCACTCGTCGATCGAATGAGTTCATTGTCGGGCCACGAGTGGACTTGCAGACCGTTGAATCGTTTCGCAACCTGTTGAACCGTATTGAGTTGCTCGAGTGCGTATTCGGCCCAGTACTGGCGATCGTCACGCATTCGCTGCAGTTCTGCAGCGACGTCGTCGTATCCGGCATCGGTAGCTGCCTCAAGACACTGCTGAAAGTTCGCACC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGTGCGGTAGAAACCCAGATCGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA // Array 2 53623-55698 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOIO01000049.1 Natrialba asiatica DSM 12278 contig_49, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 53623 37 100.0 35 ..................................... CTCTCTGATCCGGATTCCTGGTAAGCGATCGAGAT 53695 37 100.0 37 ..................................... GATTCGACCGTCGGCTCGTTATGATTCGCGAACGGAT 53769 37 100.0 37 ..................................... AACCGGAACCGGCGGACTGCCGTCACTGCGACCGGAA 53843 37 100.0 36 ..................................... GAGGATATGATGCTCGGAATCGACTGCACGAAATGC 53916 37 100.0 36 ..................................... AGACGGCAACTCGAGCGCGAACTCGGAGACCATTTC 53989 37 100.0 34 ..................................... AGAAACGGCTTCGTTGCATTTCTGGATCGATTCG 54060 37 100.0 36 ..................................... AATCAAATGTCCGAATTGTGGGAACGTAGCTGTCTG 54133 37 100.0 37 ..................................... CTTGTCCCCGCTGTGCAGGTCACCATGGAGGGCATGT 54207 37 100.0 36 ..................................... ACTGCGAAGGGGAAGCAGTCGGTGATCGGGCTCGAG 54280 37 100.0 36 ..................................... ATAAGTACCGAGAGACGCCACTCCCCGATAACCTCG 54353 37 100.0 34 ..................................... AAGAGCAGGGCCGAAGGGACCGATCTAGAAGTCC 54424 37 100.0 36 ..................................... ACGCTTTTACGTCGCTTAGCTCAGGCTGAATGTCTC 54497 37 100.0 37 ..................................... AGAACTGGGGAGCCACTTTCGCCCCGCCCGCGCCGAT 54571 37 100.0 36 ..................................... AGCACCGAGAGCACGGTTTCATCGAGTTGTCGAACC 54644 37 100.0 37 ..................................... AGAACGTGTTGCCCGACGCATCAATGTCGTCAGTCAG 54718 37 100.0 36 ..................................... ACTACGTGACGAGCGTGATCGACGACAAGCGCGCCG 54791 37 100.0 36 ..................................... CGGGCGCGATCTACGAACTGACTGAGGACCAGTTTG 54864 37 100.0 33 ..................................... ATCAATAAGAACTGGAACCGGTTCATGTCGTGG 54934 37 100.0 37 ..................................... ACCACCGAGTCAATCAACGACGTGCCGCCGGCCACTG 55008 37 100.0 36 ..................................... CGTCGTCGTCTGTTTCTCCGGTCTGTCCCTCGTCGT 55081 37 100.0 36 ..................................... TTCCGTGTTAAGCGATACCTAAACTTAGTTCCTCCG 55154 37 100.0 35 ..................................... CTTGGAGTTGTTTGCTTTCTAGTGATTATCATAAT 55226 37 100.0 36 ..................................... TTTGAGGGCCTGTTTCGGGCACTTGACCTTAATGTG 55299 37 100.0 32 ..................................... AGTCAGTCGGGATGGACACGATAGAAAGCAAC 55368 37 100.0 37 ..................................... AATACCTCGGCAAGTACCTGAGCGCGATATACGGCGG 55442 37 100.0 35 ..................................... TGCGCCACCGCCAGATTCGCTGTTAGACTCGTCTT 55514 37 89.2 39 .......C..............CAC............ AATCAGTAGGTGGCAATCCAATCACTCCCACACTGGGGA 55590 37 89.2 35 .......C..............CAC............ GAGACTATCGCCCGATCGGAAACGGCGTCCGTCCT 55662 36 94.6 0 ......................-C............. | T [55688] ========== ====== ====== ====== ===================================== ======================================= ================== 29 37 99.1 36 GTCGCGATGCGGTAGAAACCCAGGACGGGATTGAAAC # Left flank : TTGAAGCCGCCGAGGGGACGGTAGTACTCAACTTCGACGGGGGTCCGCGGGAGATCTTTCTCCCGCTGACCGTCGCCGCGATCGCCCGGCCGAACGTCGTCGACCTCGCACTCCAGTTCAGAGATATCGACGAAAAGATCGAAGAGATCGGCCTGCCGAACCTGATGGGGCGCCCGTCCGACGCGACTCTCGACACGCTCCAATATCTCGTCTCCATCGACGAAAGTACGACCCTTCCTGGAATCTCCGAGGAGACCGGGAAATCGAGAAGTACTGTCGGTCGACACCTCGACGCGCTCGAATCTGATGGCGCCGTCGAGACGTGGATGGAGGGCAAAACCCGTCACGTCGCACCGACACTTGCCGGCCGACTCCACACGTGAGTTCCAATTTTCGTCGACCTTTTTCAAAGCCGTGTACAGCTAGGGTCCACGAACCACTCTCCCCTTCTCGCAACTTCAGAGAAAACTATAGGTGCTATCCCTGAGAAAACACCCCCT # Right flank : CTCTCTCTACGCTCTTGTGAAGGTGATTGTTGGTAACCGCGATTAGAACAGCAAATCCCGTATCTAATGAACTCGAGTTCACCGACTAGGGCTCGATCTCTCCATCCAATACCTGCTGGACAATTTCGCGGAGCTCGTAGGCCGGCCCGTTTTGTACGTCACGTTCGCAGATGAGATCTCGTGTTTTAAAATCACTTAACCAGTCTCGAATCGCCCGTTGACTACGTTCCTCGTCAATCCGCATATCTGAACAGTAACTATCTGTAATCGGACCGCTGGTTTCCGGGCCGATCTTCCCGATCACTTCTAGACAAATGCGTTGTGAGCGTGAGATTGCCGAAAGGTGTGATCGGATCACGTCCGACTGAGACATTGGGGAGCCTTTATCGAGCAGATCGGTTGTCACCTCGCCGGCCCCTTCTGATCGAGCATGGAGGACTGTGTTTTTGAGAATCGAAATCGCACGCCTTGCGTCGTTTCTCGAGCGCTCGGCGATAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGATGCGGTAGAAACCCAGGACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA //