Array 1 373-142 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBBW01000190.1 Anoxybacillus flavithermus strain FHS-PPAM212 Contig_190, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 372 30 76.7 37 TG....T.T.A..A...A............ TACGAGGAATATTCCATGGTAAGTATCTTCGAGTGTC 305 30 100.0 36 .............................. TTTCACGACGGGCTTTTCTTCCTCACCTACTAATTC 239 30 100.0 38 .............................. GAACGAATGAGGCATAAATATCCCTACGTTGTCATTGT 171 30 96.7 0 ......................T....... | ========== ====== ====== ====== ============================== ====================================== ================== 4 30 93.3 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TTGTATTTTAGAGAGGTATATTTTTGGGTTTTTGTTTTTTTGATATTTTTTATGAATTGAATAGTTTTGGAATTATAAAATGTGATTTGTTTTGTTTATT # Right flank : CCCAATACCCCCTCTTAATTTTTTATTTACTATTCTTGTTTTTTGTCTTCTCGTTAGGCACTAAGACGTAAACTCACTAATTCAAGCTGTTAATCCTGAGCTCCTTTGTAATGTACCACTCATTAAATATCACTAACTACAA # Questionable array : NO Score: 8.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 2889-3990 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBBW01000002.1 Anoxybacillus flavithermus strain FHS-PPAM212 Contig_002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2889 30 100.0 38 .............................. TCCCGATGAAACAGCAACCTGAAAAAGTATATAAACAC 2957 30 100.0 38 .............................. AGGTATCGCGCATATGGATGGTGAAACTCTATGCGTTG 3025 30 100.0 38 .............................. GTAGTCGTGGTCTTGTGAAGCCGTTCGAGGAGATAATA 3093 30 100.0 37 .............................. ATCGCTGGGTGGCTCCCTTTGGTAAGCTTTGCCGAGG 3160 30 100.0 37 .............................. TTCGTAATGATGACTTCCGAATCAGTCGGAATGTCAT 3227 30 100.0 35 .............................. TTTTCATGCTCCTGTTTTTAAGCGGTTTGAGTATG 3292 30 100.0 35 .............................. AAGAAGAGGAACAACGGCTTGCGGAACGTCGTCGC 3357 30 100.0 38 .............................. CGTCAAATACGGGCCAGGACTGCGTCGTTGTTCCTTTT 3425 30 100.0 36 .............................. AAACAAGCTATTGATTATGTCGTTCGCAAAATGCCG 3491 30 100.0 36 .............................. AATATTAAATCTGTTCGTATATTTGTTAAAGATGGT 3557 30 100.0 38 .............................. TGCGCCAGGGCGGACATTATGGCCGGATTACATCGAAA 3625 30 100.0 37 .............................. ATGTACCCCATGTACATAAGTCATAGGCGATGAATTA 3692 30 100.0 39 .............................. TCTTGGATGCTCTTTTTCGATGTGAGCGTCAAGCTTGCG 3761 30 100.0 34 .............................. CGTCAACAATTTTTTTCTCCGTGATCGCTACAAA 3825 30 96.7 40 ...........G.................. ACAATACGAGCAGCACGATATTTACCAGATTTCACAAGAG 3895 30 96.7 36 G............................. CCTAAATGTATATAAAGAAACTTGTGTCCATAATCA 3961 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 17 30 99.6 37 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAGTTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : CACCTTTGTAAAAATTCTTCAATTACTTGAGCTTTTTCGTTTGGTTTGTATCGTACCTACAAGAACCAGTATGTTAGGGTCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTTAACATTTGTTATAATATAAGGTAGAGAACATCTTTCTTTCCGATTATGGTAAAGTGAGATGTTTTTTTCGTGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTGATGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACAGCGAATGGGCTTGTGCGCGATTCAGGGCTGTATGAGATCGTTGCAGTCATTGATTCGACAAAAGCTGGTCAAGATGCCGGAGAGGTGCTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 30241-29876 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBBW01000024.1 Anoxybacillus flavithermus strain FHS-PPAM212 Contig_024, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 30240 36 100.0 30 .................................... GTATCCGTCGTATTCTTCAACGGAACGAAA 30174 36 100.0 29 .................................... TGAAAATATCCGTCCAGCACCTGCAAAGA 30109 36 100.0 30 .................................... TTGTACATTATTGATACTTACCCATACAAG 30043 36 100.0 30 .................................... CCATCTTTGTGCATTTCCCATGTCGCGACG 29977 36 100.0 30 .................................... AGAAGGAAATCAATCAGCAAGTCGAAATCA 29911 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Left flank : TCTTACGTTTGGGACGATTGATGAAGCGATTCAAATGATCAACGATTACGAAAAGCCGCTTGCGCTTTATTTGTTTTCAGAAGATCGCGATGTGCAACAACAAGTATTACAACAAGTTCGTTTCGGCGGTGGTTGTATAAACGATACGGTTGTACACGTTGCCAATCCTCATTTGCCCTTCGGTGGTGTTGGACAAAGCGGCATCGGTACATACCATGGAAAAGCAAGCTTTGATGCATTTACTCATTACAAAAGCGTGCTCAAACAGACGACGAAATTTGATATCCCGTTGCGTTACCCAAACTTTCCACATGCGCTCAAATGGGTGCGGAAGTTATTGAGATGAAAAAAGGCTGATCCAAAGTACGGATTTGTATTATCCCCTACAGGTAGCCAACAAAAAAGTGGACATTTGTTATGGTGTTCTTAAGAGTCTACCTGGAAGGGGTTTTTATGACCAAATGTAAATTATCAATTTATCCTTGAATAAGACACCTAAG # Right flank : ACGTGCATCAAAAAGCCTGTAATATGAACGATTACAGGCTTTTTGATCGTTTTAAAAAAAACGTGAGAAGGGGAGAAGAGTTATCCTTCATCCGTTTTTTTAAAAAAGTGACAGTTGCGTTGTTGTAATTGTTTTTTCCTTGGTAGTAGGTTCTCCTAAGAGAAATTGCATTTTTGCATATTGTTTTTCCGTTACGATCATCGCCCGCACTGATCCTTTCGGTGGCAAGTTTCTTTTCAGCCTATTAAGATGTTTATCAGCAGATTCATGCCCATTGCAAATCCGACTATATACGGAAAACTGTAACATATCATATCCTTCGTTCAATAAAAATGTACGAAATTGTCTGTAGTGCCGTTTCTCCCGATTAGTGACGACAGGTAAGTCAAAAAACACAAGTAATCTCATAAACTTACTCATAGGTGTGTATTTGAATAGGAAGAAGTTCCGGCAATTTTAAAAACGAAGGTTTTTCGTTTCGACTAGCTGTTACGAAGCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 10845-8066 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBBW01000025.1 Anoxybacillus flavithermus strain FHS-PPAM212 Contig_025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================================================== ================== 10844 30 100.0 39 .............................. CTGTTATCGTTTGGATGATGTTTAGATTTTTTTATACTT 10775 30 100.0 39 .............................. CTGAATTGCTCGCGACTGTCTCGTATTTCGTCCCCGTCG 10706 30 100.0 37 .............................. TCACATACGCTACAACGTTATATTAATGCGTATAGTC 10639 30 100.0 39 .............................. CAAAGCAGGCGTCAAAAAAAGACGTCAAGGGTGCGTATA 10570 30 100.0 37 .............................. GTAAGACAAATTCAATAAAGGGTGGTTAATATGATTC 10503 30 100.0 37 .............................. TGTCTCTGAAGATATTAAGGCGTATCCTATCGACAAC 10436 30 100.0 39 .............................. TTCTATACTCAACAAGGAAAGAAAGGGTGTTGAGTATGG 10367 30 100.0 39 .............................. ATATGATCGCGAATGGTCGTCCAGTCGGTGAGCTTGCTT 10298 30 100.0 39 .............................. TAAAGATTCCGCAATAACCATGTTACACGTAGGAATGTT 10229 30 100.0 36 .............................. TTCATTTTCAATGTCGCCATGATCAAACGCTAATTT 10163 30 100.0 38 .............................. CAGATTGCAGCTGCTCTCCCAGATAGGACTATACAAAA 10095 30 100.0 38 .............................. CCGATGTCATCCCACACAAGCACGTCCGCATTGATCGC 10027 30 100.0 38 .............................. AACTCTTGCCATCCTTTTTCATTAATTAATCTTGTTAT 9959 30 100.0 35 .............................. GCTTTTAAAATCGCATAATACGAACAATCTTCACC 9894 30 100.0 39 .............................. AACAGGTTATTGACTATGTCATTCGCAAAATTCCAGGAC 9825 30 100.0 40 .............................. TCTTCTAATAAACTTAAAATTAAATCCCTGCGTTCTTTAG 9755 30 100.0 39 .............................. ATGCGAAGTGGAAACGTGTTGGCGCGATCGGGAAGTCAC 9686 30 100.0 37 .............................. CTAAGTCAGCGTTAAAAACGATAAAACAAAAAAGCCG 9619 30 100.0 40 .............................. TGAATATCTTGCAAGTGTCCCGATAGGGTGATTTGAGTTT 9549 30 100.0 38 .............................. CTCATATTTTTCGTTTTTTCAGATAGCTGGCCGATAAT 9481 30 100.0 38 .............................. CAAGTGTAAGAGTGAAAGTGATTCCAACGGAGAACGGA 9413 30 100.0 37 .............................. TAGAGTAAGTCAGCAATTTGCTGTTTTGTTTTGTGTT 9346 30 100.0 38 .............................. ATGTTCTGTCGCCTCCTTCTTTTGTTCCGAAAGATGAC 9278 30 100.0 40 .............................. TTCTTCTTCAGTAGTAGGATTATAAAGCAATGTTACTGCC 9208 30 100.0 35 .............................. AGCCCCGTATACGTCGATTTTAAGCTTTTGTAGCG 9143 30 100.0 37 .............................. CCTGCTGTTGTTGCGGCTGGTGTGGCTGGCGTGGAAA 9076 30 100.0 39 .............................. CACTAAACAGCGCAAAGATAAGACTAATGAAACCTCCGA 9007 30 100.0 36 .............................. TCATCATCAACCGATTGAGCCATCTGTCTTTCTCTT 8941 30 100.0 38 .............................. TACCTATACTCTCCGGGATCGCCGCCGGGTTTGCGGTA 8873 30 100.0 36 .............................. AGATCATATCCCGCTTAGCTATTACTTTTCTCCGCA 8807 30 100.0 39 .............................. AGCGTAATGTTTAACGCTTTTTCCTTCTCGAGTGGGAGA 8738 30 100.0 38 .............................. ACAATATCAAGCACCGTCATTGTCATTCAGCTGCCTTT 8670 30 100.0 38 .............................. TTATAAAACCTGGAAGCGTTTCACGCCGACGATTTGTC 8602 30 100.0 40 .............................. TTAATTAAATTCCATACAATATTCCAATCACCTCCAGCAA 8532 30 100.0 37 .............................. CTTTTTCATCTTCACGGATTTCGATTAATTTTGCACT 8465 30 100.0 39 .............................. CGAGTGTATCGGTCGCTCGATCTATATCGTATCCAAACG 8396 30 100.0 39 .............................. CAGAAAAAGAGGTGAAAACATGTGCGGTTATGATGGCGA 8327 30 100.0 36 .............................. AGTATTCATACGCTCTTTCTGGGCTTGTTATTTTGG 8261 30 100.0 39 .............................. GTGCACGCTTCACGTGCATTTCGCTGATTCCGATGATCT 8192 30 93.3 68 ..C..........................T ATCAATAAAAAATACCTATGAGGAATTGAAATATCAATAAAAAAATGTTAGCCAAAAAACATTTTGAT 8094 29 83.3 0 ....T............A....-..A...A | ========== ====== ====== ====== ============================== ==================================================================== ================== 41 30 99.4 39 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : ATGCTATGGATGACATTTATCCTTTACTTGTCCGCTTGTTTCCGATGAAAAAAATAAAGGACAATCAAGTCGATGAATTTGCTCGCTATTTAATCATTAACTACCATTTTGGAGTTCATATTATTCATCGTGATTATGTAAGAATATGCTATGAAATTCGCTCTAGAGATCGTCTTGTTTGGGTAAATATAGAAAACAAAAATAAGAATTCATGCACATATGTACAAGGTGATTTGAATTTATTTGACGAAGTGTACCATATTTATATTGAATTTGAACGTATCATAAGTAAAGTACTGTAAAATCTACTTATTGTGAATTTATTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGGG # Right flank : AGCTGTTCCGAAGTGTTGTTCGGAACAGCTTTTTTGTTGTCTATACGTTCCAGAGACCTTTCTTTTGTTGGCGTGCTTTTCGTTCGGCTATACATCAGTGTATGAACATTTGTTATAATGTATTTACACGATTATTTCCTTTATTGACAATGATAGATAGATAATCCTTTTTCACTTTTATTTTTTTAGATATTTAAAAACGTGATAGTGAATTTTGTCGAATTTATTCACACAAACGTTATATAATAGTAGTAAAATAAAGGAAAGATAGAAGCTGCAGGAGGTAACACCATGGATTCCATTCAATTTCAAGATAAAGTGTCGTTTATATGGGCGAATGCAGATTTGTTGCGCGGAGATTATAAGCAATCGGAATATGGAAAAGTGATTCTACCGTTAACGGTGATTCGGCGTATTGATGCGGTGCTAGAACCGACGAAGGAAGCGGTTCTTTCGCAATTGGAAGAATTAAAAGCGATGGGAATGACGATTGAAGACGG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 28050-24587 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBBW01000025.1 Anoxybacillus flavithermus strain FHS-PPAM212 Contig_025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 28049 30 100.0 37 .............................. TTGATTCTCTGGGCTCATGGTTTAAAGAGGTCTTTAA 27982 30 100.0 39 .............................. CAGTAGAAAAATTACTAGCAACTTTTGAAAAACCGTCTC 27913 30 100.0 36 .............................. CGTCTTACGATTATCATTTTGGAACATCTGATTTTG 27847 30 100.0 35 .............................. TTAAAAAAGATGCTGATAATTTTGTTAGTCCGTCA 27782 30 100.0 38 .............................. TAAAAGAAGAAATTAAAGAGGTAAAAACGGTCTTTCTG 27714 30 100.0 38 .............................. TGTAAATTTCTTAATCCAATTAGGATACCTATCCAACA 27646 30 100.0 34 .............................. GATGTACATGAAGTATGGGAAATGGCTCGTTTAG 27582 30 100.0 36 .............................. TCTATTCTTTCGCATCTCCTCAGCACAACGCACAAA 27516 30 100.0 37 .............................. CTAGCACCAGCTAGTCTATTTTTTTTTGAATAAATTA 27449 30 100.0 37 .............................. GCACACATTCACCACAACACAAACCCATACATGAGCC 27382 30 100.0 38 .............................. TATAATCTACTTAAATAAAAAATGACTTTCGGCAAGAG 27314 30 100.0 37 .............................. TTTGACATCAATCCATAGAAACCCGAAAGTGTATTCC 27247 30 100.0 36 .............................. CCTCGTCAAGTATTAGAATATAGTTGCCTGCTTGTA 27181 30 100.0 41 .............................. ATTCTTGCTTCACGTTGAGTCTCAAAATTGTATTGAAGCAA 27110 30 100.0 38 .............................. TTCAAGTTACACCTCCTTTTATAGACATAATGGTACAT 27042 30 100.0 40 .............................. ACGTAATTTTCAACAATCTCCTTCATCCACGAATCATCTA 26972 30 100.0 36 .............................. GGTATATCCATTCCAGGACAAGTTTCAAAGGTTTTC 26906 30 100.0 38 .............................. TGAAGGATATGCGGACAGTCTAGTCTATGAAAATATCA 26838 30 100.0 36 .............................. TTCAGCACTCCAGCGGCAATCACACCGAACTCACAA 26772 30 100.0 36 .............................. AAATAAAACTGTTCAAGACTTGGAACATTCCATTGT 26706 30 100.0 35 .............................. CTGAAAAATTGTAAATTAAGCGCATTTTCTTGTAC 26641 30 100.0 37 .............................. ACGAGATGTCTGGATCATTAATATTGCTTGGATTGAG 26574 30 100.0 36 .............................. TTCAAAACATTAGACTTTAATTTATCCAGTATCACA 26508 30 100.0 38 .............................. ACCAAAACAAAAGGGGACGCATACGAAGCGCAGATTCG 26440 30 100.0 36 .............................. CAAGTAACAAAAATGGTGATAGTATAACAATCAGAA 26374 30 100.0 39 .............................. TCCCAAAACCATAAGCGTTAAATTCTCCAATTCCCATTC 26305 30 100.0 36 .............................. GTATTCATTAACTCTCGGAAATCGCGGATGCTCCGA 26239 30 100.0 38 .............................. AAAGTGAAGCCAAAAGCTTTTGTTGATTGGCTTATTGA 26171 30 100.0 36 .............................. AACGCAGACGGAAGCGTGAATTGGAACGTCGATGAA 26105 30 100.0 36 .............................. AGACAATTCAAAGCCACTTATCAAATTGATAACCAG 26039 30 100.0 35 .............................. AAAATCGTCTAATGCAAGATCGAGACGAGAAATAG 25974 30 100.0 37 .............................. CTGTAACCAGGAACCGAAACGACCGCCCACTTTTTCC 25907 30 100.0 37 .............................. CCAAGCGACGAGAAAAACCCACCAATTTCCTTACCAA 25840 30 100.0 39 .............................. TTTTGGTTTTCATGGCCTTTCTCGGGAATATAACTATGA 25771 30 100.0 35 .............................. CACGAATTTGAGCAAGTGACAATTCATAAATAAAA 25706 30 100.0 38 .............................. TTATATGTATTAGCTTTTCATAGTCAATTAATTGAGAA 25638 30 100.0 39 .............................. ACAGTCGAGGACTTGCAAGCGAAAACGCTAGAAGAACTT 25569 30 100.0 39 .............................. AAAAGCATTACTATGATGACATTGATTGACTAGCACCAG 25500 30 100.0 39 .............................. TCTAAAGAATTGAATTGATATAATAATTCTACTTGTATA 25431 30 100.0 37 .............................. TTAAAGAGTGTAAAATAAAGATGTAAGCATCAAAGAA 25364 30 100.0 39 .............................. TTGCTTGTGTGTTTTTACCTGCCCCATCCATTCCTTCGA 25295 30 100.0 39 .............................. AAATATTTCACCACAGCTTGTTCAGTGGAAAATTCATTT 25226 30 100.0 38 .............................. TGATGTATTCGATGATTTGCCCTTTTAATATCATCGCG 25158 30 100.0 37 .............................. GCGAATAGGATTGGAGCGCGATAGGTTCGGGTGTCCT 25091 30 100.0 38 .............................. TCTGTTTCCCCGATCGATCCATACTCATCGACATCTTG 25023 30 100.0 39 .............................. GAAGGCGGTGGCAAGGTTTCCCCTGCTTATGTTGATGAG 24954 30 100.0 39 .............................. TTGGAACGTTGGTGTAAACACTTCAGAAAGCCTAATCTG 24885 30 100.0 39 .............................. CCTCTACGTTTTCTGCTTCGATCATGCGCTTCGGTATTT 24816 30 100.0 38 .............................. GTGTTCAAGCACGCAACAACGAACATCTCCCTGTCTGC 24748 30 100.0 38 .............................. TTCACAAAAACTTTAGTCATAAATATTCTCCTACTTTC 24680 30 96.7 34 .............................T AATGGAATCACAATGTTGCCTCCTGCTAGATAAA 24616 30 80.0 0 A.......................A.CGTT | ========== ====== ====== ====== ============================== ========================================= ================== 52 30 99.6 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GAAGCGATCGATGCAACAAAGCGCCCGCTCGTAATCGGAGGTGTATTCGTACTTATGCTTGCATCGATCATTTTCTCTCACCGCGCCAACACATATTTGCGCAAATTAGACAATGAACAGTAAATTCCCCTGTTTTCGTACAAAGAAAAAACATGTAAAATAAAAGAAAATGGGTAAAGGGGGAATAAACGATGATGTGGATGATTACAGGTCTAGTCATTACAGCTGTCATCGGTTTTGTTATTATCGCGGAAGTGAACGCCGAAGCATAAAACAGTCTCTAAACAGGAGACTGTTTTTAATAAAATTTATTTGTGATAAACTTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACTTCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGCTGTATCAACGGACATAGACTATTGACTGAATTTTCAAATGTATGTATAATGATGTTGTATAGCTTTTCCATGTGTTGATATATCAACGCTTTTTTGGG # Right flank : TTTTGTATTGAAAAGCAGGGATGTTTATGCCCTGCTTTTATTTTTTTGTTACAACTTTCAGAAAAGTATTGCGCAAAAACTAGTTCGTTTGTATCATCAGTAATATGAGGATATTTTTTGAAAAGGTGGATAAGGGATGAAACTACTAACATTTCTCGGCGCGAATGACTATCGTGAAACAACGTATCGTTTTCGGGAGCGTGTGCATACGGCAAAGTTTTTTCTATCTGTCCTTATTCAAGAACTGCAACCAGGTGAAATATACGTATTTATGACAGATGGGGCACGAGAGAAAAACGAAGCACCGTTGCTTGACGAATTAAACCGATACGGCGTAGATGAAAAGAAAGTGCATGCTGTATGCATTCCCGATGGGCAAACAGAAGAAGATTTATGGAATATTTTTTCTGTTATTGCTGATCATGTGTATGAACATGATGAAATCGTCCTTGATATTACGCACGGATTTCGGACGTTGCCGCTCGTTGGAACAATTAGTT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 11760-8947 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBBW01000059.1 Anoxybacillus flavithermus strain FHS-PPAM212 Contig_059, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 11759 30 100.0 38 .............................. ATGGCTTTTCTACGGTCATTGGATATATTAATCCGTTT 11691 30 100.0 38 .............................. TCCATTTTCTTTAATAATTCTAAACAATGAACAAGATA 11623 30 100.0 38 .............................. CACAAGACATTGATGTGGAATCTATTGCAGCGCTTTGC 11555 30 100.0 38 .............................. CGTATCCTCATAGACTGGGTTGGATTCACGTTAAGCCC 11487 30 100.0 40 .............................. CCAAAATGGGTTTGGAAAGTGAATTTTTTTGGTGAAGTTT 11417 30 100.0 37 .............................. AGAAGATATCGCTTTCTCTCAAACATCCGTCACCTTC 11350 30 100.0 39 .............................. TTATGTTCGTGTATCGTAAGTTGACTAATGAGGTGATAC 11281 30 100.0 38 .............................. GTTCATTGGAAGGGGGTGAAAAATGTGGGTGCTGTCGC 11213 30 100.0 40 .............................. AACAAAAAGCTGTATCTAGCAAGTTTAAAAATGCTATCAA 11143 30 100.0 35 .............................. ACGCAAATTATACATAGAATCACGAAGAAAACCCA 11078 30 100.0 38 .............................. TCAGCAGGAGTCACCAAATGCGGACAAGGTTGTTCAAA 11010 30 100.0 40 .............................. CTTTTCGGGCAACTTATGTTTTTCAACGCAAATTTCACGC 10940 30 100.0 38 .............................. GGAACTGCTATTGAAGGTGTGAGTTCTGCGCTTCAAAC 10872 30 100.0 40 .............................. GATATAAAACATGTGGAACTCCGTTTTTATATCCTTTATA 10802 30 100.0 38 .............................. GCTGGAATTGCAGGCGTGGCGATCTTGCTATTTGGTGG 10734 30 100.0 40 .............................. CAAATAACCGCGCGGTGTTCCGCGCGGAAGGCGCCGCGCA 10664 30 100.0 37 .............................. TCACGTCAAAAAATTTTTTGCTGATCACTTGGGGATT 10597 30 100.0 39 .............................. TCGCGAAAGTCGGAGACGGCAGCGACAATGTCGCGAAAG 10528 30 100.0 35 .............................. GCGGAGGATAAGAAAGAGCTTCTACAACAATATGC 10463 30 100.0 35 .............................. TTGGAGTACAAGAAGCGATATGATGAGGCTATGAA 10398 30 100.0 37 .............................. CAAATAAAGTTTTGCGTATAGACAACAAAAAGAAATA 10331 30 100.0 37 .............................. CAAATAAAGTTTTGCGTATAGACAACAAAAAGAAATA 10264 30 100.0 36 .............................. GTTTGTCGATTTAGGCAAAAAAATCGGTGGGTTTTT 10198 30 100.0 38 .............................. TTTTTGGAGTACTTACAATTGTGTAAGTTTTTAATAAT 10130 30 100.0 37 .............................. TACGAGGAATATTCCATGGGAAGTATCTTCGAGTGTC 10063 30 100.0 38 .............................. TCTATATCAGTATATATTTTTACTTCGGTTTTTTTATT 9995 30 100.0 37 .............................. TACGAGGAATATTCCATGGGAAGTATCTTCGAGTGTC 9928 30 100.0 36 .............................. TTTCACGACGGGCTTTTCTTCCTCACCGACTAATTC 9862 30 100.0 38 .............................. GAACGAATGAGGCATAAATATCCCGACGTTGTCATTGT 9794 30 100.0 36 .............................. ACCGTCACACTCGTGAGTTTGTTATTCTCTATTCTG 9728 30 100.0 36 .............................. TCAACCTCCATTCTCAACGCCTCGTACGCTGAGATC 9662 30 100.0 39 .............................. CCAAGACAACCGCTTATCATTTAAAAAAACCTTGTCCAA 9593 30 100.0 39 .............................. CCAAATGTGAGCTTGATTTGCGCTGCTTCTTTTGCAGTC 9524 30 100.0 39 .............................. TAGAGTAAGTCAGCAATTTGCTGTTTTGTTTTGTGTTCT 9455 30 100.0 39 .............................. AGCGAAGATCATGAGCAGTTACTTTCATTTCAATTGTTT 9386 30 100.0 38 .............................. TTAGTTATATTAATCCGTTTTCGGACAAGTTTCTTTTA 9318 30 100.0 39 .............................. GTCATTTTTTGTTCCCCTTTCAATTATTTTTTTATCAAT 9249 30 100.0 39 .............................. TAGAGTAAGTCAGCAATTTGCTGTTTTGTTTTGTGTTCT 9180 30 100.0 38 .............................. AAAATAATCTCTTTTGTTATAGGTGTATTTGTTATGTT 9112 30 100.0 39 .............................. TAGGCAATAAGAAGCTTCTCGGTTTCAGCTGCGTCTTTT 9043 30 100.0 37 .............................. ACGACATTTGTTCAACTTTTTCATACCATATTTACAA 8976 30 80.0 0 ......................G..TGCCA | ========== ====== ====== ====== ============================== ======================================== ================== 42 30 99.5 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTG # Right flank : TTGTGATCAGTTTTATATTTACTTTGTAATGTTTTGTGTTAGGGGTAGTTTCCTTAATTTCCTACTAATCCTTTTTATTTTTTAGAGCGCTGGTCAGCTATCCTCAACCTCTGTTTTTATGTTACTTATTTCAAAGAGTTATATTAATTTAGAAGGAATATATTCCTTTTATGTCGTATTTTATGGTAGGTTAGTTTATTTAGAAACGAGGTGTGATTTTGCTAGCAGAAGCAGTTGTTCGAGTAGGCGAGTCGCTTGTGAGTAGTGATTTACCTTTAACGGAGCGTATTCGTTTGTTAACGGATGTAGATAATGAAGCTTGCAAGAATTTTTTTGAGCACGTCTGGGTTGTGGAATGCATAGAGGAACAAGTGAACGTTCGTTTGATGAGAATAGGAGAAAAGGTGAAGGAAGGTAAAAAAGAAACGTTTGTTGTTGATAGAGCTAAAAACGTTGCCTTTCCTATCATTTATCCTAATGGTGGGAATCCGCTAAATGCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //