Array 1 281560-281395 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE150487.1 Atopobium sp. oral taxon 199 str. F0494 acKdQ-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 281559 32 90.6 34 NNN............................. CATGCCACCGTAGCACCACAAATTTCTTTAAATA 281493 32 100.0 35 ................................ CGGGCTGTCTGATCTTATGGGCGAGTGGAACAAGC 281426 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 96.9 35 GTCGCACCCTTCACGGGTGCGTGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : AGTTACTTCCTTAGCAAGTGCTAAAAAGTAAAAAAGAAAAGACCTTTGATTTTGATATTGATGCTCAAGTCAATCGACTGTACCTTAATAAGTTGATGTCTTTTGTTTCGTTGGCACTTGATGCGAGTTACGATAAGATGCTTACATTTGTCAATCTTAAGACTTTTTTGACAAAAAACGAGCTCGAGAGGTTTTATGAATACATATTTTTCTCGAGAGTTCGCGTGTTGATGCTTGAGAACAAGATGGATCAGTCCTATCATAAACACGAAAATAAAAGTATTGTTGACCAGCATTTTCTAGAGTTCTAGTAGTTCTTCCAGTTAGAATTTTCGTCTCTTTGCAGAGAGAATTTGCTCTAATGGTTTTTGAGCAGTGTCATTCTGACTGGTAATCGAACCGCTTCCCCTAGCGAAGCTTTATATAGATTAACCCTTCAAAATCGGGTATAGTTCAACTGAAGCGAGGTACGCCCGGGCAGTTGCTTGTCTTGACACGGC # Questionable array : NO Score: 8.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 288070-287770 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE150487.1 Atopobium sp. oral taxon 199 str. F0494 acKdQ-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 288069 32 100.0 35 ................................ CATCAAAGCGTAGTGAGTTGCATTGTGGCTCTCGG 288002 32 100.0 34 ................................ TGCTATTTTCGACTTTGAAAATAGTACCGATAAA 287936 32 100.0 36 ................................ CCCTGAACCTCGCACTCGATGGTCACCGTACGCGAC 287868 32 100.0 35 ................................ ACGTTATCGGTGCCTATGCCGGTAACAGTGCCGTT 287801 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 5 32 100.0 35 GTCGCACCCTTCACGGGTGCGTGGATTGAAAC # Left flank : CTTAGCGATTATCCTGCATTTTTTTGGAGGTAATTGTGTATGTTTTGGTGACCTATGATGTTGCAAGTGGAGATGTTAATGGAGCAAGACGTTTGCGGCGAGTCGCGAAAGTTTGTATGCAATACGGGCAAAGAGTTCAATACTCTGTATTTGAATGTCTAGTTGACCCCAGTCAATATGAAAGTATGAAACATGAGCTTGTTAGAATTATCGACAAAGAAAAGGATAGTTTACGGTTCTATAATTTAGGCAAGCAATGGAAAAACCGAGTTGATCATGTAGGTGCTAAAAGTTCTTATGATCCCGAGGGGATTTTATGCATTTAAGATACTAATTGTGTGCGCGAACCGTGAGCAATGGATTATATACGGGAGATTCGCGCAGTCTTTGGGGGGGGGGTATTTATAACCAAAACAGATTTATTTTGGTTACCAAAATTCCAAAAGCCTCCAGAAAGTATAAAATAGAGATGTCAATGCAAAATAATGCATAAAGTGACA # Right flank : GCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //