Array 1 135921-135216 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CPIH01000009.1 Mycobacterium tuberculosis strain 2520Q, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                                	Insertion/Deletion
==========	======	======	======	================================	===============================================	==================
    135920	    32	 100.0	    47	................................	TCGAAATCCAGCACCACATCCGCAGCTGCGGCATGCTCCCGAAGTCG	
    135841	    31	  96.9	    42	...-............................	ACGGAAACGCAGCACCAGCCTGACAATCTTATTCTCGCGTCG     	
    135768	    32	 100.0	    44	................................	CCGACGATGGCCAGTAAATCGGCGTGGGTAACCGATCCGGGTCG   	
    135692	    32	 100.0	    39	................................	CTGACGGCACGGAGCTTTCCGGCTTCTATCAGGTAGTCG        	
    135621	    32	 100.0	    42	................................	TCAATAACACTTTTTTTGAGCGTGGCGCGGTTGAGAGTGTCG     	
    135547	    32	 100.0	    42	................................	TAGTACGCCATCTGTGCCTCATACAGGTCCAGTGCCCTGTCG     	
    135473	    32	 100.0	    44	................................	GCATATCGCCCGCCACACCACAGCCACGCTACTGCTCCATGTCC   	
    135397	    32	 100.0	    44	................................	ACACCGCCGATGACAGCTATGTCCGAGTGACATCCTCCCAGTCG   	
    135321	    32	  96.9	    42	..............A.................	TTGAACCGCCCTTCGCGCGGTGTTTCGGCCGTGCCCGAGTCG     	
    135247	    32	 100.0	     0	................................	|                                              	
==========	======	======	======	================================	===============================================	==================
        10	    32	  99.4	    43	TCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                               	       

# Left flank :   CCGCACCGCCCGCTCACGCAGCTCCGGCGGGTACCTCCTCGATGAACCACCTGACATGACCCCATCCTTTCCAAGAACTGGAGTCTCCGGACATGCCGGGGCGGTTCAGAGAGGGGACGGAAACCTGCATCCGGAAAGTCCGTACGCTCGAAACGCTTCCAACGTGTC
# Right flank :  TACGACGACTGGGTCGCCACCGCGTCTGTTGACCGGCATTCAGGATGAGCATGATGGCGGCGTTGACGGTGAGGACGTTTGGTCATGAAATGACCCCGCCGGGAGATGTCCGGCGGGGTCGGTGGTGTTCGGGGTGTCGGTGTGGTGTTCAGTCTGCCGTGACTTCGGCGATGGCGGTGCGGGTGGTGGATTCGTCGACGATGGCCTTGTCGGCGGCGAAGGCGGCGACGAGGGCTTGCAGGGCGAGGTTGTTGACCGCGCGGGGGTAGCCCCGGCTGGTCTGGTGGATCAACCCGATGGCGTCGTCGGAGAACAGGGCATCGTCGCGTCCGGCTAGCTTGAGGTGGTGGCGTAGGTAGCTGCCGGTGTTGGTGTCGGTCATGGGCGGCATGGCATATCGGAGTCCGATGCGCTGGTCAAGCGCGGCGAGCACGCCGAGTTTCATCCGCCGCCGCAGGGTGGGTTGGCCGATGAGCAGGCAGGCGAACGGGCTTGACGAG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [1,12] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.40,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,0.74   Confidence: LOW] 

# Array family : NA
//