Array 1 36876-38187 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSOZ010000024.1 Photobacterium sp. WH24 WH24_24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 36876 29 100.0 32 ............................. TTATCGAGCGCTATTCTCAGTATTATAGTGCC 36937 29 100.0 33 ............................. TCGTACTTCCCGCTCATTCCGCTGCCTTCCAGC 36999 29 100.0 32 ............................. AAAGAGCAAAGTTCCCTTGTAACGCTCGACCT 37060 29 100.0 32 ............................. TTGAATCGACAATTTTGTCGCGGCCCTGGCGG 37121 29 100.0 32 ............................. ATATCTTTGATTTTCTCCTGGTTGTTAATGTT 37182 29 100.0 32 ............................. TTTTAGAGGCGGAGATTGCCGCTGCATCAAAT 37243 29 100.0 32 ............................. TTATCAACCTGTCGCAAGGTGGCGGCAGTGAA 37304 29 100.0 32 ............................. CTGGAGCAATGGCGGCGACCCATGGAACGCAG 37365 29 100.0 32 ............................. GGATGAGGTTTTTATGGCAGTCACAATCAGGA 37426 29 100.0 32 ............................. CGGTGCCAGGCTAACACTCTGCCGCTGTCCTG 37487 29 100.0 32 ............................. TTTGTTCACTGATTCTCTTCTGGGTCTGACAA 37548 29 100.0 32 ............................. GCGGCTATCCGTCTTCTGGTTTAAATCTTTTT 37609 29 100.0 32 ............................. GGGGCCATTCTAGATCAGTGCGGGTTCAATAG 37670 29 100.0 33 ............................. AGCTGGTTAGTGTACGAATGCTGTCTACATGTA 37732 29 100.0 32 ............................. CGATATCTGCAGCTTTTTGCTGAGAAAATCCC 37793 29 100.0 32 ............................. GTCGCCAGCTGAATTTTCTCACCTGAGCCGGT 37854 29 100.0 32 ............................. TGTGCAAGGATTAATGGAGTTAAATCCTTGTT 37915 29 100.0 32 ............................. AACACCTGCCCCGTACCAATCGCATCGATGTT 37976 29 100.0 32 ............................. TCACCACGCAAACAGGTGAGATTAAGCTCAAG 38037 29 100.0 32 ............................. ACAATCAGCCAGGTGCATGGGGTCAGCCACAG 38098 29 100.0 32 ............................. CCTGAAATACTTGAGCTTGCTGGTATTCTTGG 38159 29 75.9 0 ....C......AC............CGAA | ========== ====== ====== ====== ============================= ================================= ================== 22 29 98.9 32 GTGTTCCCCGTGAGTACGGGGATGAACCG # Left flank : CAGCGCTCAGGCCGCCATATCCGCCGCGCCGAGATCGCCAGCGCCGAGCAGATTGCCGAGGCAATGGACGATGTATCCAGCCTGAAAGCCGACATCGCCGGACTGCCCGCTTCCGCACTGCAAGCCGAGATGTTATGGACGGCAGACTGCATGCTGCTGGCCAGTCAGATCGCCCTGAGCTACGCCAACGCCGGGCATCGTGATATCACCGCTTTACCGCAGCAAGAAAAAGCCCGCATTCTGGACAAACTCGCCCTGGTTGAAGAGGCCTACGCCGATCTGTGGTTGCTACATTACCGCCCCGGCGGTCTGCGGCAAAGTGCCTCGCGGTTGGGGTATTTGCGGGAGTTGTGTGCAGATAAAACAGGGCAATAAGCCAAATCGCCACCTCTTAGTGAGCCATTTTGCACTGTTCAATGAACCGGTTATTTTCGCTGTCAAAACTTGGTAGAATTATATTGGTTGAATAAATGCTGTTAGAACAATAGCCTATATTTAGG # Right flank : AAACAACACTCCTGCACGTTCTGTGTCGGTGCGGGCCCAGATTCCTTTTGCATTGATAAGGATTGATTTCACACCGTTGACTTTCATAGTTGAATCACAGTATTCATCTGATTTCATTTGTATAGTTCGGCTTAAGATGATTGATTGTGGTGCGGTGATGCCAACTTATTTTCAGTACTGGGGAAAAGCCAAACGCGATCCGAAACAGCCCGGTGCGGATTATCATTTACTGCCGTACCACTGCCTGGATGTTGCCGCGGTCGGTTACCTGTTGATGGATCCGAACAAGCCGCTCACACGGGACTTAGCCGATTTTCTGGAAATCACCCCCGAACAATTGTGTGCCATCTGGACTTTTTGTCTGGCACTGCACGATTTGGGCAAATTCGCGGCGGCGTTTCAGCAGCTCTCTCCTGCTGGCTATAAAGCGATGCGGAATTCGAAACGTGTGAAGTGCTATGACAGTAAAGCGTTTCGTCATGACCGGATGGGATATTACG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGAGTACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGAGTACGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 47165-48901 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSOZ010000024.1 Photobacterium sp. WH24 WH24_24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 47165 29 100.0 32 ............................. GTTCCATGTCCATTTTCTTAGATTCAAAACCG 47226 29 100.0 32 ............................. TTAACATAGGAAATGGCATTTTTCAGCATGTT 47287 29 100.0 32 ............................. TATCGGGCATCACGGCCCCCTTCCTGAGCACC 47348 29 100.0 32 ............................. CTAAAACGCTCTGTAATCCATTCTAAGCGCCC 47409 29 100.0 32 ............................. GGCGCGATACTGCTTACCGACCGGAGCGAACG 47470 29 100.0 32 ............................. GGATGAATGAGTTCACATGTTGGGGTGGGCGA 47531 29 100.0 32 ............................. TGGCCACGGCCCTCAGTCTCAGCCTTCGCACC 47592 29 100.0 32 ............................. CGAGCTGTTGTATGAGGCCCGGGTTCCGTATT 47653 29 100.0 32 ............................. GTATCAAACGGTCTGGCGCGGAAACGGATGGA 47714 29 100.0 32 ............................. TCCGCCCTCGAACAGGATTTCACCCGCGCCGA 47775 29 100.0 32 ............................. CCCTTGCTTTTGGTTTCTCTCTACTTCCGATG 47836 29 100.0 32 ............................. CACAGGGTAAACATCCAGCCACTGAACCAGAA 47897 29 100.0 32 ............................. TCATTGAGATTATCGAAAATATCATGTTCGAA 47958 29 100.0 32 ............................. CGCAGGACATACCGGAGGATAGCTGGGCTAAG 48019 29 100.0 32 ............................. GGAAAAGGCAAAATCTAAGGCGCTGGCCGTGC 48080 29 100.0 32 ............................. CGGTTCAACTGATGTCGATGCTGTCGCCGTGC 48141 29 100.0 32 ............................. ATCATTGATGAACTTAGGCGACGCAACCCGAA 48202 29 100.0 32 ............................. GTCGGTGTAAGCCGAACTGCGATTGATAAGGC 48263 29 100.0 32 ............................. ATGCCTATATTTTCACTCTATCGTACTGCCAC 48324 29 100.0 32 ............................. CCCTTTCAGTATCGCCAAAGAGAATTACTGGA 48385 29 100.0 32 ............................. CAGGTATTCGGGTCAGTGTGGTCAATCCGGAT 48446 29 100.0 32 ............................. CAGGTGTTGATTCCCGGTGAAGGGCTGCGCCC 48507 29 100.0 32 ............................. TTGATGATCCGTGTTCTAACTGACGATTCACC 48568 29 96.6 32 ..........................T.. GAAGCTTTCCACATCCGGCCACTGGTTGTCCC 48629 29 100.0 32 ............................. ACGAGCTGAATAAACGACTGGATAATTCCAGA 48690 29 100.0 32 ............................. TGAGCTCCTGATGCATATGATTATGCTTCTTT 48751 29 100.0 32 ............................. GATTGGCCACAGGAACTGAGCAGCCCTTCCGA 48812 29 100.0 32 ............................. CATTCAGAACTCAAAACGGATGGTACTGCGCA 48873 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 29 29 99.9 32 GTGTTCCCCGTGAGTACGGGGATGAACCG # Left flank : TCCATTGATCGAGGAGGTGTTGAGTGCTGGGGAAATTGAACCACCACTGCCGCCGGAAGATGCACAGCCGCCAGCAATTCCTGAGCCGAAGTCGATTGGCGATGCCGGACACAGGAGTAAATAGTCATGAGTATGCTGGTGGTTGTCACCGAAGCGGTGCCGCCCAGATTGCGGGGTCGACTGGCCGTTTGGCTGTTAGAAGTGCGCGCCGGTGTGTATGTAGGGGATGTGTCGCGCCGGGTGCGTGAAATGATCTGGGAACAGGTGACTGAACTGGCCGAAGACGGCAATGCCGTGATGAGTTGGGCTACCAATACCGAATCGGGATTTGACTTTCAGACTTACGGCGAAAATCGCCGTGAACCCGTCGATATGGATGGCTTACGCCTCGTACTGTTCAAGCCGGTTGATGCCTCAGATGCGTAGTTTTCAAAGGTGAAAAGTCTGGTAGAATTTTTGAGGTGAAAAAAGTCTATATAGAACAATGATCTAAAATTAGA # Right flank : CCAGCTGCAGTGATGTAGCAACGAAAGTCACGGTGTTCCCCGTGAGTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGAGTACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGAGTACGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //