Array 1 51801-52364 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAANBJ010000039.1 Staphylococcus sp. 11007852 Contig_46_121.903_pilon, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     51801	    36	 100.0	    30	....................................	ACGAAGAGTATTACCGATATATTGACTACT 	
     51867	    36	 100.0	    31	....................................	AGAGTTATTAAAACCGTATCTTGCACGCGCA	
     51934	    36	 100.0	    30	....................................	ATGTGCGGTGCATAGTTAAGGTTCCTTTCT 	
     52000	    36	 100.0	    30	....................................	ATGTCATCGTCATGTCGTCGTTGAGCATGT 	
     52066	    36	 100.0	    30	....................................	AAATCACTATTAAAGATGATTCGACAGCTT 	
     52132	    36	 100.0	    29	....................................	TCAGGTACACGCTCTATTCAATTGTACCG  	
     52197	    36	 100.0	    30	....................................	AGTTATGTATATTAAAGATGTTGTCACAAC 	
     52263	    36	 100.0	    30	....................................	TGGTAACCTTGCAACACGTGGCACAGTACA 	
     52329	    36	  80.6	     0	.........................G.TTT.AT..A	|                              	
==========	======	======	======	====================================	===============================	==================
         9	    36	  97.8	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC	                               	       

# Left flank :   GTCGTTCACGATGTACAATAACGCCATCTTCATTTTCTTTTTCATTATTTTCAGTGTGAGCTGCAGCTATAGTTAAAATGTTGTGGTCAAAATCAACGTGAATGTCTGATTTTGCCATACCTGGAAGTTCAGCGCTTACAACATATGCATCTTCACGTTCAGAAATATCTGTTTTAAAAGCTTGAGATTGCATTAAACCTTGCCCAAAATCTTTAAAAAGATCACTCGGATTCATATCAAAAATAGAATGATTAAATGGTTTTAATTGGAATGCCATAAAGCATCGCTCCTTCATATTTTAGAATGTCGCAAATATCAAGAAACTGAAATGGTAAAGGTCACATCTAATCCTTTACAATCTTATTATATGACAAAGGTCAAAAATAGTCAAGGTCAAAGTATTGTGATTGGTGTAAATTAAAATTTATCCAAAATACGTAAAGATCAGTGATATCAATGGATTAGACAAACTTAAAAGTTATAGTATACTGTAGCTAGAG
# Right flank :  ATGTGCTATTTATGAAATATCTATATAAGCGATCCATTTATTTTAGCGATAACCTCATAAAATTGTTTAACTCAATGAAATAAATGTTATTTAGGTGGAAGTTATAACACTCACTCCATAAAAAATATCAGAAAATTCTTGACTCAAATGGATCTTATGATAAAATAAATTTACAAGTACTTATTTGTGCTTATACCTAAAATTACAGAATCTACTAAAACAAGACTATATGTCGTGTTTATCCCACTAATTTATTAGTGGGAATTTTTTTGTTCTTCTTTTATAATAGTATTTAAAAGGGAGGGCAATGTATAAATGAATAATTATATACTAGGACTCGATATAGGTATTACCTCAGTGGGATACGGTATTGTAGATAGTGATACGCGTGAAATTAAAGATGCTGGGGTACGATTGTTTCCAGAAGCGAATGTAGACAATAATGAAGGAAGACGTAGTAAAAGGGGAGCGCGACGATTAAAAAGAAGACGAATTCATAG

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC
# Alternate repeat :   GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAACT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.97%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.60,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//