Array 1 15576-16275 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PQNE01000018.1 Corynebacterium bovis strain WCM5 18, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     15576	    29	 100.0	    32	.............................	GGCTGGCACGGGTAACCACCGGTGAGAATGTC	
     15637	    29	 100.0	    32	.............................	GCATGGTCACCCCCCGTGAGCTCCGAGCCGCC	
     15698	    29	 100.0	    32	.............................	ACAGCCCCGCTCGAGTCATGGCGGACGTACGC	
     15759	    29	  96.6	    32	............................G	CGGCTGTGCATGACGTCAATCGCTGCGTTCAT	
     15820	    29	 100.0	    32	.............................	ATCTGGGACGTCGCCGCCCGCAGATCATTCGT	
     15881	    29	  93.1	    32	.............CG..............	ATGGTCGGCCAGGTGTGCGGTCTTCTGCATAG	
     15942	    29	  93.1	    32	............C...............T	GCTTCGTTGAGTGTCGGTCCGGCAGGTGCCTG	
     16003	    29	 100.0	    32	.............................	GTGGGCGTCCGGTCGGCACTGTCGACGACGGG	
     16064	    29	  96.6	    32	............................G	CAATGGCAGCGGGTAGTGAAGTCGGGGGTTGA	
     16125	    29	  96.6	    32	......................G......	GCGTCCGAGTGGGCGCGCCTCGACTCGGATTT	
     16186	    29	  93.1	    32	............C...............G	CGTCACGCTTGGACGACTTTGATCCGGCATGT	
     16247	    28	  93.1	     0	...........-................T	|                               	C [16262]
==========	======	======	======	=============================	================================	==================
        12	    29	  96.9	    32	GTGCTCCCCGCGTGAGCGGGGATGATCCC	                                	       

# Left flank :   GCACCGGAAGACGGGGTTGACCAGGTTCCCGGCGGCCCTTCGCGACGGGAGGCTCCGTGATCACCGTGGTGTTGACGTCTCCTCCGGAGCGGGTGCGTGGTCACCTCACGCGATGGCTCTCGGAAGTGGCGACCGGAGTGTATGTCGGCAAGGTGAGTGCCAGAGTGCGGGACGAGCTGTGGCAGATGATCCAGGTGAACATGGACGGCGGTCGGGCGGTGATGACGTACCCGACCACCATCTGCGAGCAGGGGTACGCCGTGAAGGTTCACAAACCGCAGTGGGAACCGGTTGATGTCGAGGGCCTGGTCCTGTTTCGTCGGCCGGGCCGTGACCGGACGTCGCGGACCCGCGGCGATTGGTCACGGGCCTCGCGGGAGCGCGACGGCAGGACCAGACGAGCGGATGATCTGCAGTGATGGTTGGTGCTGACGTGAGGGCGCTGATCGACATTGAATGAAATCTGGCTTCTCGTGTACTAACATCCCTGGTCAGGAAGT
# Right flank :  TCACCACCACCGCCCACCCACCTCCCGTCGTGTTCGCCCGTCCGCCGACCGCAGGTCTAAGGTGAATCCGTGGCCACGCGAACGACGACGAACAATGCCGCGCCCGGGTCAACCCGGCGCCGGCGGGGCTGGCGAGCGTTCCTCACGCCGGGCTGGGTCATCACCGCCGTCATCGTGGTGATGTTCGCCTACGTGGCGTTCACCGTCCTCGCGCCGTGGCAGCTGGGGAAGAACACCCGCACGCAGGAGAACAACCAGCGCCTGTCCGCCGCGATGGACGCCGACCCGGTGCCGGTCGAGGACGTCCTCCCCGCGGACGGCTCACCCGCCGGCGCGGACCGCGAGTGGACCCGCGTGACCCTCCAGGGCCGCTTCATCCCGGACGCCCAGGTGCTCCTGCGCAACCGCCCGGTGGACACGAGCCCCGCGTTCCAGGTCCTCACCGCGTTCCGCCTGGATTCGGGCGGCACGGTCCTCGTCAACCGGGGCTGGACGCCGCC

# Questionable array : NO	 Score: 5.80
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCGTGAGCGGGGATGATCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [53.3-28.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//