Array 1 72892-74378 **** Predicted by CRISPRDetect 2.4 *** >NZ_CPXU01000003.1 Streptococcus agalactiae strain B81VD, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 72892 36 100.0 30 .................................... GAAAAATTAAATACTTTCCAATAATAATAA 72958 36 100.0 30 .................................... TCCTTAATTTGCCGTTCATACGACACAGAG 73024 36 100.0 30 .................................... TGTCAATTTTCGTGTAAAGGAGGTAACTTT 73090 36 100.0 30 .................................... CATTGCGCTTGCAACTGACCATGACTCACA 73156 36 100.0 30 .................................... CGGACGATGAAAACTTGTATAAAGCCGTTT 73222 36 100.0 30 .................................... TTATGTAACCAACTGTCGAATCACCCCATT 73288 36 100.0 30 .................................... GTCGTCACCTTGCCTTCTAACTTACACCAT 73354 36 100.0 30 .................................... TTAAAGTTCATTACTTTCGAAAACTCTTTA 73420 36 100.0 30 .................................... AAGAACAATTAACGGTAAAATCACAATTGT 73486 36 100.0 30 .................................... AACATTTAAAGTTATATTATAACACCCATG 73552 36 100.0 30 .................................... ACTATAAGTATTTTGTTTTATCCCTAGTAG 73618 36 100.0 30 .................................... TATCTACGAGACGAAAACAATTGCCAATGT 73684 36 100.0 30 .................................... AGTTATCAATGCTATATGGTTTCTCATCTT 73750 36 100.0 30 .................................... AACTGTGTGATACTTTTCGTTTTTTTCTTT 73816 36 100.0 30 .................................... TTTTATAAGTGATAGAGTGTGCAACACCGT 73882 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 73948 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 74014 36 100.0 30 .................................... TATTTCATCATAGAAAATCCTGCTAGTGGT 74080 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 74146 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 74211 36 100.0 30 .................................... ATTACTTTCAAGATGTCTATGACTATATGC 74277 36 100.0 30 .................................... ACCCCAAAGTTATCAAAGAAGATGACCATA 74343 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGCCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //