Array 1 196467-199547 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWGB01000004.1 Klebsiella pneumoniae strain VRCO0056, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 196467 29 100.0 32 ............................. TTGACCTCGCCGCTTCCGGCGTCGCCTACAAA 196528 29 100.0 33 ............................. TGCATCAGGAGTGTTGGATACTCAATTCCAGGC 196590 29 100.0 32 ............................. CCTACAGTCACAGCAGGCGGCCAGCACGTGGG 196651 29 100.0 32 ............................. CTCCGGGCGAATTTCGCGCCCGTCTACCGTCG 196712 29 100.0 32 ............................. TCGGAGATCAGCACCGACCACCACAACACCCC 196773 29 100.0 32 ............................. CACCACCATCATTAACCCCTGAAGAAGTGGGA 196834 29 100.0 32 ............................. TGTTACTAACCCTTCATGTGTGATACTTTCTA 196895 29 100.0 32 ............................. ATTTCTTCACCTGCATAGAGCAGTTGCGCCAT 196956 29 100.0 32 ............................. GCACCGTGGCCGCTGGCGACGATTACAGGATA 197017 29 100.0 32 ............................. TAGAGAATGCAGCCCGCGTGAGATCCATTGTC 197078 29 100.0 32 ............................. TGACGACACCTGACTGGTGCAGCGCCCGGTCA 197139 29 100.0 32 ............................. GGCAAGACGCGCAAAAAGAAAAATCATTTCAG 197200 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 197261 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 197322 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 197383 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 197444 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 197505 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 197566 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 197627 29 100.0 32 ............................. TTTCTGCAAATCGAGTTGCCAGCGCGCCACGC 197688 29 100.0 32 ............................. GTGGAAATCAATTTTTGTTTTGGCCAGCGCGC 197749 29 100.0 32 ............................. GCCTCCTCCCGTTACACGGACGGCATTGACCC 197810 29 100.0 32 ............................. AGATTGAGCCATATCTATCACCGCCTTCGCCA 197871 29 100.0 32 ............................. ACCGGGCATTAAATTTGGTCTTCTCGTCCACG 197932 29 100.0 32 ............................. GCTGGCCGGAGTGTCGGTCATCGCCAGCCCCA 197993 29 100.0 32 ............................. AACAAACCGATCGCTCGATCAATCGCGTTAAA 198054 29 100.0 32 ............................. ATAATACTGTATACATAAACAGTATTTGAGGG 198115 29 100.0 32 ............................. TGCTGCGCAGACAATGGTCGCTATTTTGAAAC 198176 29 100.0 32 ............................. CCGGGCGATCATGTCCGCACAGTCAAACGCTC 198237 29 100.0 32 ............................. ATGAGTTCGTTCTGCCTGATAACACCCGCCGC 198298 29 100.0 32 ............................. TATACCGGCAATCACTGACGTCAACTCAGAAG 198359 29 100.0 32 ............................. GTACCGAGGTCAATGACGCTAACGGCCTGCAC 198420 29 100.0 32 ............................. CGCGCGCGCTGATCCTGGAGGGATACCGGGAC 198481 29 100.0 32 ............................. CTGAGTTCGTGACGTTTACCTGCGGGGAAGAC 198542 29 100.0 32 ............................. ATCCAGAGCTGACGGCATTCACGTTTGACGGC 198603 29 100.0 32 ............................. AGCCGATGCCTACAGTCACAGCAGGCGGCCAG 198664 29 100.0 33 ............................. TGTATTTCTCGGTATCCGTGGAGCGGTTGCCCC 198726 29 100.0 32 ............................. GCGAACATCCCCGTATAGGTGCCGTCTCCGGT 198787 29 96.6 32 A............................ GAGCTGGCGGTGTTTTTCTGTCAGTAGACGAT 198848 29 100.0 32 ............................. CGCTCTTCTGGTTGATGTGGCATGCCTTATAG 198909 29 100.0 32 ............................. CTCAGCCTTCACCTGCTCTTCCAGTTGAGCCA 198970 29 100.0 32 ............................. ATATTGAGGGGGTCTAGCGAGACGTCTAAGTC 199031 29 100.0 32 ............................. CCTGACGAAGACTTCGTTCGCCTCATGCAAGG 199092 29 100.0 32 ............................. CCACTCAAAAAAGGTCGAAGCCAAAAGGTTAT 199153 29 100.0 32 ............................. GGGAGCTTTCATTTGATCAGGCATTTGAGCAG 199214 29 96.6 32 ..............T.............. AGCGGCCGTTACGTAACTTTTCACGTAACAGC 199275 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 199336 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 199397 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 199458 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 199519 29 79.3 0 ...........ATTC..........G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //