Array 1 5498021-5498185 **** Predicted by CRISPRDetect 2.4 *** >NZ_CVPD01000001.1 Paenibacillus sp. Mc5Re-14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 5498021 32 100.0 35 ................................ AACAAGAATACGACAAACTTGTTCTTGCTCATGGA 5498088 32 100.0 34 ................................ AAAATCGGAATGTGGCACCAAATAATCATCACAA 5498154 32 81.2 0 ............G.A....CAT.....A.... | ========== ====== ====== ====== ================================ =================================== ================== 3 32 93.7 35 GTCGCACTCTATATGAGTGTGAGGATTGAAAT # Left flank : TTTTATCACTAGTATTATTGCTATTCAACCAATAAATTACAACAAAATACGACATAAAAGCCCTAAATTCGTCTTTATTTACTATAATATTACATTAAGTGTGTATCAAGCGGTGTTCGTTCTCGTGTTGATGACGACAGATTGTACAACCCATGGTTTGTTTCAGGTTATTTTTCATATCTGAATCAGTTACTGTAACCGTCTTGATTTTATTGTTCCATTCCACTTTTAGATAGATTTGGTATAAGAGAAACTGCACGTGTAGAAACTAGTGTCACACTGTTTTATTTTAGGTTCTTGTAAATTAATAGATATTTCTGGTGCGAATGCCAAACTAGCATGATTTTCCCGAGTTATTCGCACCTCAGATTTTGTCGAAACCCGTTGAATGTATACAAAACGTGAAGTTTAATCAGAGAATTTAGTAAATTCTAGTTATCATACTTACTGTTGTGCGCTACAATGGAGATTAGAAGGCCATTGGATATGTAGTTTTTGCT # Right flank : TAATTGCTGTCATCAGGCCGTCGCTCCCTTTTTTGTTTTGTCGCAGCGTGAGCACATAGATTGGCGCATAGCTCACTGAGAGGAACACAGGAAATTCCTGGAGACCGAACTGTAGCCGTCTTGGTTTTATTGTCCCTTTCCATTTTTAGATTTGGCATCTGTACGTGTAGGAGCTAATGTCACACTGTTTTAGGATCTTGTAAAACTAATAGATATTTCTGGTGCGAATGTGAAGCTCACATAAAAACCTTGGGTCTTTCGCACCTCGAAATTTGTCGAGAAGTAACTAGATCAGTTACCTTCAGTAAAAGTCAATGGTTGATCCAAGCCTTTTTGGCATCAGTTTTTGCGATAATGTGAGGAATTGATATCATTAGGGTATGAATTACTGTATTTTCGCTGTCGACTCCATGTGAGTGCGTGGATTGAAATTTCATCCCGAGCTGCTTGCTCCTCATCTTCAGCGAGCGGTCGCACTCCATGTGAGTGCGTGGATTGAA # Questionable array : NO Score: 8.05 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGTGAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.76%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 5498585-5498887 **** Predicted by CRISPRDetect 2.4 *** >NZ_CVPD01000001.1 Paenibacillus sp. Mc5Re-14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 5498585 32 84.4 38 TGTCG........................... TTCATCCCGAGCTGCTTGCTCCTCATCTTCAGCGAGCG 5498655 32 100.0 34 ................................ ACATGCTTGCCGTTGTAGAGTGCCGGACGGTATT 5498721 32 100.0 36 ................................ TTGGCCTCACCCTTCACTTGATACACGCCTGTACGC 5498789 32 96.9 35 ......................A......... GGAAATTTGGCCTTTGTTTGATCGCTGGACTGCTC 5498856 32 84.4 0 .........................CCATG.. | ========== ====== ====== ====== ================================ ====================================== ================== 5 32 93.1 36 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : GGAGTCGCACTCTATATGAGTGTGAGGATTGAAATAAAATCGGAATGTGGCACCAAATAATCATCACAAGTCGCACTCTATGTAAGTGCATGGATTAAAATAATTGCTGTCATCAGGCCGTCGCTCCCTTTTTTGTTTTGTCGCAGCGTGAGCACATAGATTGGCGCATAGCTCACTGAGAGGAACACAGGAAATTCCTGGAGACCGAACTGTAGCCGTCTTGGTTTTATTGTCCCTTTCCATTTTTAGATTTGGCATCTGTACGTGTAGGAGCTAATGTCACACTGTTTTAGGATCTTGTAAAACTAATAGATATTTCTGGTGCGAATGTGAAGCTCACATAAAAACCTTGGGTCTTTCGCACCTCGAAATTTGTCGAGAAGTAACTAGATCAGTTACCTTCAGTAAAAGTCAATGGTTGATCCAAGCCTTTTTGGCATCAGTTTTTGCGATAATGTGAGGAATTGATATCATTAGGGTATGAATTACTGTATTTTCGC # Right flank : TGGAGCAGCCGTCACCTGGTCGTACGATTGGAGAGCGCCACTTTATCCGAATAAAAGATCCGATAAGTGGAGGAACGGATATTTTATTCGATTTGGAGGGTGGGCGACGATTTAGTACACTTCCGTGTGGGATTAGTTGATCTTGTAGCAAAAAGATGTTTTTTACTTCCATGGATGCCATAAAAACCTGCCGTTAGATAATATGAATGTTTTATTATGGTGCGAGTGTGAAGCTCACATAAAACCTCGGGTCCTTCGCACCTCGAAATTTGTCGAAAAGCAACTGAATCAGTTACCTTCATTAAAAATCAAGCGTTGATCCAGGCCTTTTTGGCATCAGTTTTTGCGACAATGTGAGAAATTGATATCATTAGGGTATGAATTACTACATTTTCGCTGTCGCACTCCATGTGGGTGCGTGGATTGAAATCTAGTACTTTGCAAGCTGCATAATCGCAGACCCTGTCGCACTCCATGTGGGTGCGTGGATTGAAATTATG # Questionable array : NO Score: 8.63 # Score Detail : 1:0, 2:3, 3:3, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //