Array 1 340640-340967 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SULN01000005.1 Pseudomonas rhizoryzae strain ZYY160 contig5, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    340640	    28	 100.0	    32	............................	TATCGGTGACGGCTCGGCACTGATTCCTATGC	
    340700	    28	 100.0	    32	............................	TCCGCAGCGGCCAGGGCGAAGGCCATACGGCG	
    340760	    28	  96.4	    32	.................T..........	TTCTGGTCATCTCCAACGATGGCGTCCTGGGC	
    340820	    28	 100.0	    32	............................	ATAGAACGGCGGGCACCAGCGACCGAAGACTT	
    340880	    28	 100.0	    32	............................	TTGGGGAAGGCTAGCTCCAGCCAGGTGAATAG	
    340940	    28	  78.6	     0	.....................AA.CCCC	|                               	
==========	======	======	======	============================	================================	==================
         6	    28	  95.8	    32	GTTCACTGCCGTATAGGCAGCTTAGAAA	                                	       

# Left flank :   CCACGCCTTCGCCACTGACGCCCTGGCCCTGCATTACGCCCGGCAGGCGATCGATGCCGGCCTGGATCTACAGATCGAACCCGAGCTGCGCGCCTTCTTCTATCTGCCATTCGAGCATTCCGAAGCCCTGGCCGATCAGCACCGCTCTCTCGAATTGTTCGAAGCCCTGGGCATCGAGCACTACCGCAGCTATGCCCAGGCGCATCTGGACGTGATCGTCCGCTTCGGGCGCTTTCCACACCGTAACCGGGCGTTGGGCCGGATCAATACAGCGGAAGAACAAACATGGCTGGATGCAGGCGGCGGATTCTAAGCAGGCAGGGCTCAGGCTAGCATATGTCCAGTCTTGGTGAATGACGCTGCATTCACACCCTCTTTTTATACACCCGCCTTACAACTATAAAAATCAATAACTTGGAAAAGGGCGCGAAAAAAAGGGTTTTGCGAGGAAAATCCGGTTAGTCTTCGATATATCAAGGTGTTATGTAGAAAACGCTCTA
# Right flank :  CCGTATCTCTCTCGGCCTACCCGTTCCCCGCCCCATCCCGCCATTCCACCACCAGATCCGCCCGCGCCCGATCCCCGTCGATCAGCCGTGCATTGGGCTCGTCGGTGCTTGCCACCCAGGCCTCGGCGGCTTCCCGGCTACGGCCGAAATGCATATGGCGGGCGACCAAGCGTTCGCGGCGTTCCTCGGGGTCGACGCGCACGTACCAGCATTCGTCGAACACCTCGGCCACATCGCTCCAAGGCGCCTGGGTCAGCAGCAGGTAGTTGCCCTCGCTGATCACTAACTGGGTGTCGGCAGGCACCGGAATGGCATTGGCGATGGGCTCTTCGATCTCGCGATTGAACAGCGGGGCATAGACGGTCTCTCCCGCTACCGGGTCTTTCAGGCGCTGCAGCAGGGCGCGATAGCCGCGGGCGTCGAAGGTGTCCGGCGCGCCCTTGCGCTGGGCGCGGCCCAGGCGGGCCAGTTCGCGGTTGGCCAAGTGGTAGCCGTCCATG

# Questionable array : NO	 Score: 6.05
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTATAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [61.7-33.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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