Array 1 479262-480487 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGSX01000002.1 Pediococcus pentosaceus strain NCTC8066, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 479262 36 100.0 30 .................................... TTGTAGAATTGAATTTTGAATAATGATCGA 479328 36 100.0 30 .................................... GAATCGTTTCGGCTGTTAAATCCGGAATGA 479394 36 100.0 30 .................................... ACCAGGATGAGTTTGAAATCAGTCAACGAA 479460 36 100.0 30 .................................... GGCCGTTTCATCAATTTCAAACGTTACGTA 479526 36 100.0 30 .................................... CATTATTTTTTAGAATGTAAAAATAAGGCT 479592 36 100.0 30 .................................... CGTCCTTTTGAGACACCTGCATAGTTACCT 479658 36 100.0 30 .................................... TCTGATTAACATCACTTGTAACGGTAATTG 479724 36 100.0 30 .................................... ATTAAGCTCAATCCAGAGATTGCATCAGTC 479790 36 100.0 30 .................................... ATTAAGCTCAATCCAGAGATTGCATCAGTC 479856 36 100.0 30 .................................... ATCGCAATCAAGATATTTTGATTCAAATCA 479922 36 100.0 30 .................................... CGACCGGAATTTCAGACAGTAAAAAGGTGC 479988 36 100.0 30 .................................... TGATGTACTAGCGATTGTGCTAATTACCGT 480054 36 100.0 30 .................................... TACTTGTAAAAAATCGTTTTGCGGGCGCTA 480120 36 100.0 30 .................................... AATTCGGATGGTAGCAACCGATTGTGGTTG 480186 36 100.0 30 .................................... AGGGAATGAGACAGACGAATACCAGTGATG 480252 36 100.0 30 .................................... ATGTTTGTATCATCTAGTTTCTATCGTGCA 480318 36 100.0 30 .................................... TACAAAAAGCCAAAGGTTAGCAAAGTAACA 480384 36 100.0 30 .................................... GATGTTTTAGATTTTGAAGAATACACAAAA 480450 36 91.7 0 ...........A.................A..T... | C,A [480478,480480] ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.6 30 GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Left flank : CAGAATTTAGTTTTAACAAAATATTTGCGCCAAATTGAAAAGTTATTTTTACGGTCTGTTACAGATGAACAGCAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCCGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACAATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGCGTTAACTAATGTAGCTCATTATTTAACGTCAGTCGAATTTGAAGAACTTAGCCAGTTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAGCTTCTATGGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAATG # Right flank : CAAACTGTACCCCCGCAACAACTTAGCCAGCTGTTGTAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAAAAGAATCATTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGATCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGTCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATATGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCCAGCGTGGAATCAGCTCCAAACATTGCACTGAGGTTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATCGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACCAAGGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATGATCGTAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //