Array 1 136853-137781 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADFAJ010000001.1 Burkholderia gladioli strain BCC1809, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 136853 28 100.0 32 ............................ TTCGATGCGCTCGCCGGGCGATACAATGCGCA 136913 28 100.0 32 ............................ TGCGCCGGCTATCCCAGTGCCCCCGCTGAACG 136973 28 96.4 32 .................A.......... ACGGCCGAAGCCGACGCCAGTACCGGGGTACC 137033 28 100.0 32 ............................ TTGAAACGCCGGGGCGTTTGCATGTACGGATT 137093 28 100.0 32 ............................ TACGCCTACGCGCTTGATTACCTGCCCGGCGC 137153 28 100.0 32 ............................ TCAGGATGCGGCGCGCGAACTGCGCGCGTGTC 137213 28 100.0 32 ............................ GGCTGGGAGCAGTCGCGAGGCGCAAGCCTGGA 137273 28 100.0 32 ............................ TGGAAGTAGATCGAGAGGTTCTCGAACTTCGT 137333 28 100.0 32 ............................ ATCGCGGTAGAACGGCCAGCTCGTTGCCGCGC 137393 28 100.0 32 ............................ TGCAGGTGCGCGGCGCCGACCAGCTCGGGCGC 137453 28 100.0 32 ............................ CGTCCGAGCACCGGTAGTCCACGCTGTGCAGC 137513 28 100.0 32 ............................ GTCAGCGCGGCTGCGGTGGTGTTGTTCGTCAT 137573 28 100.0 32 ............................ TTGCCCCCGGACAGCGAGACGACGTGGAGGGT 137633 28 100.0 32 ............................ GTTGCGGCGGCCTGCGATGCGCGGGCTTCCTA 137693 28 89.3 32 ........T....A...T.......... TAGATCCCACGATCGCCTTCCCGTGCTTGGCG 137753 28 85.7 0 ...TA......T.C.............. | T [137777] ========== ====== ====== ====== ============================ ================================ ================== 16 28 98.2 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGACGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTTTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGCCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGGCAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGGGGGGAGGGGATA # Right flank : ACTGCGATATGAAAGTCTGGCAGACAGGCAAGCTTTGCCTCCAGCGCGCGTGTTTTAAAATCGCAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGGTTGGCTCGAATACCGAGTCGTCCGCGATTTGCGCATGTTCGCACCCGATCGCGGCACCGGCGGCGCCACAAACCAGACAAGAGACAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCATCACCTGCCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACACCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAACACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCACGAGACTACGTCG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //