Array 1 28134-32904 **** Predicted by CRISPRDetect 2.4 *** >NZ_WIOE01000030.1 Acinetobacter baumannii strain ABS063 ABS063_00030, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 28134 30 96.7 30 ............................A. GAAACGCCTGATTCCTGCAAATGCAAAATA 28194 30 100.0 30 .............................. CCAAGCTTTGAGTATCTGCCGGACGCAAGA 28254 30 100.0 30 .............................. TAGAATGATCTGCTTCAGCATTGGATTGCC 28314 30 100.0 29 .............................. TTGATCTTCATATTGAAAATTTCTTCTTA 28373 30 96.7 30 ............................A. TTCCGCAACTCGCTACTTCCCTGATGCAGA 28433 30 96.7 30 .............................G GAAGATTTGCTTATGGCGTTCTGGAAAGAA 28493 30 96.7 30 ............................A. TGCTTAGTAATGCGCAAAAACGGTCATCCA 28553 30 93.3 30 ............................AG CAGAAGAACGCAGAAAAGCGAGAAGCTTAA 28613 30 96.7 30 ............................A. CTTGAAAGGCTTGAGCTTAAAGCTTTTTAC 28673 30 96.7 30 .............................A CAGCTGGCCGCGTATATAACGGCTCAGTAT 28733 30 93.3 30 ............................AC AACTCGATGTTGGGTATGCAGAGAGCCTTG 28793 30 93.3 30 ............................AA ACTTACACTTCTCAGCGTCAAACCATGCGT 28853 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 28913 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 28973 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 29033 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 29093 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 29153 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 29213 30 93.3 30 ......T......................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 29273 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 29333 30 96.7 30 .............................C CTTCGGGAGGTTTTCTTTTGGGGTGATCAT 29393 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 29453 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 29513 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 29573 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 29633 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 29693 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 29753 30 96.7 30 .............................C AGCTCCCGATTCAACATCCAACAACATGCT 29813 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 29873 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 29933 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 29993 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 30053 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 30113 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 30173 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 30233 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 30293 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 30353 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 30413 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 30473 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 30533 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 30593 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 30653 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 30713 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 30773 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 30833 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 30893 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 30953 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 31013 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 31073 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 31133 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 31193 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 31253 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 31313 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 31373 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 31433 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 31493 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 31553 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 31613 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 31673 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 31733 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 31793 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 31854 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 31914 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 31974 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 32034 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 32094 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 32154 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 32214 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 32274 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 32334 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 32395 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 32455 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 32515 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 32575 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 32635 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 32695 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 32755 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 32815 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 32875 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 80 30 95.8 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //