Array 1 459790-456653 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBFQ010000006.1 Leuconostoc gelidum subsp. gelidum strain Kg1-2 NODE_2_length_559612_cov_140.090469, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 459789 36 100.0 30 .................................... TTGTACGGTTTCTGGGCGACTCGTTACTTT 459723 36 100.0 30 .................................... AATCAAAACATTCTCGGCGCTTAAACAGGG 459657 36 100.0 30 .................................... AGGTAATCACTTTACTAACACTAAAACTTT 459591 36 100.0 30 .................................... CCCAAAAGAAAAACAAACGGAGTTATTGGC 459525 36 100.0 30 .................................... ACGTTTCTCGGTACTCGTTACGTTTATTTT 459459 36 100.0 30 .................................... CTCTCTATTACGATATATGATTCACCTTTA 459393 36 100.0 30 .................................... ATGAACATGTGACATTCAGAATAGAAGAGG 459327 36 100.0 30 .................................... TATAGGCTTCAATACGTTGGTAGGCACGGT 459261 36 100.0 30 .................................... AACAAATAAACATTGCAGGGTTAGGCATGC 459195 36 100.0 30 .................................... TAAGATTGTCAACACTACCGCCAACACATA 459129 36 100.0 30 .................................... CATATTTTATCGTGTCAGAATACATCCCCT 459063 36 100.0 30 .................................... TTATATACAAGGCTATACGACATAGATGAT 458997 36 100.0 30 .................................... TAAAGTAGAAATGCATGATGTGTTTATTGA 458931 36 100.0 30 .................................... GAGCTTTTCATGACATCGCCAGACAATACG 458865 36 100.0 30 .................................... GGTAGATGCAGGTGTTTATCAATCCGTGGG 458799 36 100.0 30 .................................... CACCAAACGTTGGTATCAGTCAAAATTGTT 458733 36 100.0 30 .................................... ACTTAGTCCTTTTATCGTTTTCGTCCACCT 458667 36 100.0 30 .................................... TAATCTTTCTTGCGCTAATTCATATACGTT 458601 36 100.0 30 .................................... ACGAGAGGAACAGCTAATAGCAGTAATGGG 458535 36 100.0 30 .................................... GAGAAATATAAGGTCAATGATTACGACTAT 458469 36 100.0 30 .................................... AGCTCCGAATAATATATTTAACTCTTGCGA 458403 36 100.0 30 .................................... ATCTTGCAGGAACAAGTGGTGCTTGGGTTA 458337 36 100.0 30 .................................... AAAAAAATCATGTAGTTTATCTCTAATTGT 458271 36 100.0 30 .................................... TTTCGCTGATAGCTTGTTAATGAACACACT 458205 36 100.0 30 .................................... GGTATGGTCGGCTACTTGGAATGTCGTTAA 458139 36 100.0 30 .................................... GACGATGCACAAGATTGGATAGATGAGTTG 458073 36 100.0 30 .................................... ACCCAACTATCTTAAGTAGTCAGGTCATAA 458007 36 100.0 30 .................................... ATTAAGTCCATTATTTCAATAGCTCCTTTC 457941 36 100.0 30 .................................... CTTGTTATAGCCCGCGCCTGCTTCATAATC 457875 36 100.0 30 .................................... TGTTTGGTCTTGCAAGTCGCGCAATAATCC 457809 36 100.0 30 .................................... ATATAAATGCGGCGCGCACAAGAAGAGTAA 457743 36 100.0 30 .................................... ACTAGACGATGACTTTGTTCCAGCTGAATT 457677 36 100.0 30 .................................... GTTAGGATACATTTTAACCAAGTATCCTGT 457611 36 100.0 30 .................................... GCGATTTGAAAGATGTTGCCGTCAATCCGT 457545 36 100.0 30 .................................... CAGATAGGCGGCATTGCTAAACTATTTGTA 457479 36 100.0 30 .................................... ATTGAGGAGAAAAATAATGAACAAGAAATT 457413 36 100.0 30 .................................... GATAAGGTAGCTGCTAAGCAAGCAGAAGTC 457347 36 100.0 30 .................................... ACCGTCCATGTACGCCTTACTGTTAACAAA 457281 36 100.0 30 .................................... AATAATACTGAACACTATCGCCTGACTTAA 457215 36 100.0 30 .................................... GACCAATTGGTTTAACCGGTGCTACAGGAC 457149 36 100.0 30 .................................... GCGTTGTCTGAATGCCCTTGTCAACCCATT 457083 36 100.0 30 .................................... GGTCGATAAAACGATCGAAGAAGCGCTTGA 457017 36 100.0 30 .................................... TGTTCCGCGTTGGAATTACATTGGCGACGC 456951 36 100.0 30 .................................... GTTCATCTTGTTTAATACGTACTATTATTT 456885 36 100.0 30 .................................... ATCAGACTCAGGTAACAGATTATATACAGG 456819 36 100.0 30 .................................... TACACAATTTAATGCAAAGCCATTGCTCAG 456753 36 94.4 30 ...........................A.......T GTATCGGGAACAGGATATCAGATCTTGAAG 456687 35 77.8 0 .............AC..T..T...A..A..-...G. | ========== ====== ====== ====== ==================================== ============================== ================== 48 36 99.4 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Left flank : GGTGCGCAACTTGATGTGAATAAGTTGTATCAAAAAAATATCGTTAATACAATGAAAAATTATGCAGATGATCAAGCGTTAGAAGTGTTTTATAAAATAAATTCTGAATTAAATCATGTCTTAGAAAACATTATATTAGAGAATAATTTGCCCTTTTATTTTCAAACAGAATTCAATATTGTCGAATTAATAAATGAGAAAAAAATTAAGATAGAAACACTGACAAACAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAGCGTTGCTGGTGAGTTTTCAGAGCAACGTTTAATCGTTTTTACGAATTTGTATTTGTTGTTATCGGTTGATCAGATTGACTATCTGAATAATCTAGCGAAGACAATGAATTTATGTTTAATTTCTCTTAATTTGACACAAAACCCTGTTATGACTAAACAGGGTCTACCTCCAGAAATCTTTATTGATGAGGATTTCGTTCAATTTGGTGCTGACTAGCTGATGCGAACAGGCGGTCT # Right flank : GCTTAGGCGCTTTTTATATGCCATGTATGTCAAAAAAAGGTTTACGCGAATAACGATTATGGTATGATATATTATGTTATAAATAATCACGTCAAACGTGAGATGGAGAAAGGGAGATTTTCCTGTTTTGGTAAATAAAAAATTGCGAGTGAAAGAACTACTAGTTTCAACAATAATTATTGGTGGCGTTATGGGCACCATGTCTACGGTTAATGCTGCTGAAAATACAGCGCATGTATCGACACAAGTGCCAAGTACAATAACATCAGGTTCGAGTGGTACATCACAAGCGCCAAGCACTAAGACATCAAGTTCAACCATAAATGAGTCGAGACAAAATGATAATTATAATGTGACGCCGTCAACAAGGTCTATTCAAGTACATCAAGCGAAATTTAAAACCGGTTCTGTAATTGTATTGACCACTTCAGCAAAAACATCCAGTGGTACACAACTTCAAAAGTATGGTAATCAATCAGGTGTTGTGACGAATGTCATAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //