Array 1 2655880-2658741 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018664.1 Sphingobium amiense strain DSM 16289 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2655880 32 100.0 33 ................................ AAGAGCTGGCGCGTCGATCCGTCCGAGGAGAAA 2655945 32 100.0 34 ................................ AAGCTGGAGACGACGGAAGGCGTCGACGCGGGGC 2656011 32 100.0 34 ................................ ATGAATGCGTCGAACGGCTCCACATCGCTTTCGC 2656077 32 100.0 34 ................................ ATCATGAGGGCCAGCGTTTTGGCCCGGCGCTCTG 2656143 32 100.0 34 ................................ CAGCGCCTTGCCAGCGAGCCATCGCGCTCCAGCA 2656209 32 100.0 33 ................................ ATGGTCGATCCGATCAGAAATAGGCGCTCGAAC 2656274 32 100.0 34 ................................ GTCGTAACGTCGATCGGCATCAACGACGCCAATA 2656340 32 100.0 34 ................................ GTCGACGATACCCAGATCATCGGACGGGCTACCC 2656406 32 100.0 34 ................................ GCGCTTTCGACGCCTCTTGTCAACGGAGACACCG 2656472 32 100.0 34 ................................ CGTGCCGCCGCGCCGCCGACGTCCAGCGGCCCCC 2656538 32 100.0 34 ................................ AGATGCTCATAAACGGCCTCGCCTTCGTCTCCCG 2656604 32 100.0 33 ................................ CCGGATGCGACTGACGATCGGGTCAAGCAGATG 2656669 32 100.0 34 ................................ ACGAAGGGAATGCTGCACGGGCTTAACGCCACCC 2656735 32 100.0 35 ................................ ATGTCCGCTGATCGGCGTGATCCCGCGCGGCACGC 2656802 32 100.0 34 ................................ CGCTGCAGCACTACGCCGGCCGCGTAGAGACCTT 2656868 32 100.0 34 ................................ ATCAAGATCATCATCGGCCCGGTGGGGTCGGGCA 2656934 32 100.0 35 ................................ TCGCGCAGGCGTGGCCCAAGGATGCTGTTACGGGC 2657001 32 100.0 21 ................................ CTTGATTGTGACGCAGGCCAG Deletion [2657054] 2657054 32 100.0 33 ................................ TGCTGGGCGCGAAGGACGGGGCGATGACGACGC 2657119 32 100.0 33 ................................ GGTCGCGAGGGTGCGCTCGGAGGTGACCGTCGG 2657184 32 100.0 34 ................................ ACCTCGACGCTTGGCGTGTGCCCCTTTCCGGCGC 2657250 32 100.0 34 ................................ TTCATCATGAAAAGTATTACCGCTGATACTGACG 2657316 32 100.0 35 ................................ TCTCACGCGCAGCCAGCGGCGCAATCTACTCGCGA 2657383 32 100.0 35 ................................ ATTACCACGCCACGCGGTCGCAATCACGCCTACCG 2657450 32 100.0 34 ................................ ACGATTGGGCGTCCGATTATGCCGACGCCTTCCG 2657516 32 100.0 33 ................................ ACCACGGCGCGGCTCGAAGTGCAGTTGCAGATT 2657581 32 100.0 33 ................................ ATCGAACTGCTGCGCAACGCCATGGCTCTGACC 2657646 32 100.0 34 ................................ CGTATGGAACGCCTGAAGGCCGCGCAGGCGGAAC 2657712 32 100.0 37 ................................ GCGTCAGGGGCAGGGCGGTGGGGTAAAGGCCGCTCCG 2657781 32 100.0 34 ................................ TCTATGAAATTCAGCGCCGCGCCGGGCGGCACGT 2657847 32 100.0 34 ................................ CGCGCCATGATGCTTTTCGCTGCCTCGGCATCTT 2657913 32 100.0 34 ................................ GGGTCCTTCTTGCGCATGTCGTTGCGATACCGGC 2657979 32 100.0 34 ................................ ATTCGATCCCCTCGCCTTCGCCCGCATGGAACCC 2658045 32 100.0 35 ................................ GACGTGTCTATGTCGCCAATTTCGAATTTGGTGCC 2658112 32 100.0 36 ................................ GCCAATCGCCTTGCCGCATTGGCGGGTGTCGGCCAG 2658180 32 100.0 34 ................................ GTAGGCGGCCTGGATGTCGAAGCAGCGGCCGCGC 2658246 32 100.0 34 ................................ TCATATTCCGGCGTGATCCCGTGAACCGCTGGCC 2658312 32 100.0 35 ................................ CTCCACCCGCACCACCCAATCCTCAAGATTGGCGG 2658379 32 100.0 35 ................................ GACCTTCGCCGCCGCCTCACTTCCGAAAACGGAGT 2658446 32 100.0 34 ................................ GCGATGTTCGTCACGCCATGGGCGGCGCACGCCA 2658512 32 100.0 34 ................................ ATCAAGATCATCATCGGCCCGGTGGGGTCGGGCA 2658578 32 100.0 33 ................................ TGCTGGGCGCGAAGGACGGGGCGATGACGACGC 2658643 32 100.0 35 ................................ GACAACGGCTATATCGGCCATGCCACCTACAGCGG 2658710 32 96.9 0 ........................G....... | ========== ====== ====== ====== ================================ ===================================== ================== 44 32 99.9 34 GTCGCCTCCCACACGGAGGCGTGGATCGAAAC # Left flank : TATCCGCCATTCATCTGGAAATGATCCATGCTGATGCTTGTAACCTATGACGTGAACACGCAGGATGCGGAGGGGCGCCGCCGATTGCGCCGGGTCGCGCGCGCTTGCCTGGATTACGGCCAGCGGGTTCAGAATTCGGTGTTCGAATGCGAGGTGGACCCAGCGCAATGGACGCGCTTGCGGGCACATTTGCTTGCTGAGATCAATCAGTCGAAGGACAGTTTGCGATTCTACAGACTGGGCGCGGACGGCAAGCGTCGGATCGAACATGTTGGCGCAAGCCCGGTCATTGATCTGGACGGCCCGCTGCTTTTTTGACGACGCGCGAACCTATATCTGTGGGTGAAAGTCCGGCATGTTCGCAATCCGCCGTAACCTCCGGAAAAGCTGAGGTTTGGGCAATGCCGCCATATCCGGGGTCTCATCGGCGGGCCAATTCCGTGGAGTTCGCGCAAAGTTCCAGATTTACGGTTCTTTCTCATTGTCATAAGCAATAGGGC # Right flank : CGTCATGGCCGTCTCCGGTGGCGGTCCAACCTCGCCATGCTGACGCGTTGTGACGAATGTCCGGTGGGCGCCAAGCCATGCGGGGCCGCGTCCTAGGAAATCGGGTGGATTATTTCCAATGGCAATAGTCGGAGTAATTCCTTACAGTCCGGCTGCACGACTAAGGGCTAACCGGCGGAGCGGAATCGGCGGCGCGCCAACAACGCGGCGGATCTGCCACGTCGATTGCCGTCACCATGGAGCCTTCAGGAGAAGTGTCTCATGAAGGCGCCTGGGTCGGGGAATGTTTACGTAAACGTCGGCGCAAACCGGAGCGACGCTGAAAAATGGAGAGGCGCGATGGGTGTAAAATGCCGTTTCTGGCTGTCAGCGGCCGTGCTGGCTGTCGGTTCTGTGCCAACCATAGCAGCGGCAAAGGAGCCGCGGGTGAGCGCCTCCTCGACCGGCCTCGATGCGCGCGGTCACATGAAAAACGTCATGCCGGCCGCTGCGAGTGGCTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTCCCACACGGAGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCTCCCGCGCGGAGGCGTGGATAGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.10,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //