Array 1 21364-21838 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDRP01000027.1 Micrococcus luteus strain DE0459 NODE_27_length_21956_cov_78.329740, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 21364 36 100.0 34 .................................... TCCGTGGCGGGACCATGTATGCGATCTGGCGGAC 21434 36 100.0 38 .................................... GGCATCCGCACCGTGTCCTCCCTCCTCGCGACCGGGCA 21508 36 100.0 39 .................................... TGCAGCCCGTCATGGGACAGGCTCGGCGGGTACGTGCCG 21583 36 100.0 38 .................................... CAGCCAGCCGGGAGCGTCTGGCCCACCCGTGAACCGGT 21657 36 100.0 38 .................................... GCCGCGGACCGCACCGAGGTCGATGACGCGACCGCCGG 21731 36 100.0 36 .................................... GACGCCGAGCCCTTCATGGCGTCGTAGACGCGCTGG 21803 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 7 36 100.0 37 GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Left flank : GTTGAGTGCCCGGGATCGTCTCCGGAGGAGGCTCATCGCCTATGACATTCCTGACGACCGCCGCAGATCCCGGGCGGCCCGCGTCCTCGAAGGGTTCGGAGATCGAGTCCAATATTCAGTCTTCGTGGTGGATGCCTTGCCCGCCCAGTTCGTCTCCCTGCAAGCAGCCCTCGAAGCGGTGCTGGATCCGGGCGAGGACAGCGTGCTGGTCTGCGACCTCGGCCTGACGGCCACGCTTGGCGCAGAGCAGTTCAGCTTTCTGGGTCGATCACGCGAGATCTCTGTGGATGGGCCCATCATCATCTGAAGCGAGCCAGGGACCTTCGCGAAGGCTCCGTCGATGTCCGGAATCCGGCGAGCCGTCGCATCAGAAAAGGGCTTGTCAGCCCACGGTTCATGGGTCGAGGCCGATAAGCATGGCGCTCCACGGACGCCTCTTGAGCCCAGGGCTCGCCGACGGTCGCGTCTGCCCATGTCAAAGGGCTGTAATCTGAGGTGCT # Right flank : CAGGGCAAGCACGAGGCCCCGGACCCCCGCCACCACGGTCTCCGCTCCTGTGGGGTGTCAAGGGCCATTGAGTTCTGCCCATAGGCGGCCAGTGTTTCTTCCCGCTGGTGGCCATCAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [36.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 50-1161 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDRP01000009.1 Micrococcus luteus strain DE0459 NODE_9_length_111572_cov_70.080424, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 50 36 86.1 37 A.GG.....A.A........................ CCGAAGCGGCGTTGGCCCCGATCGTCGTGGGCAGGGA T [54] 124 36 100.0 35 .................................... TCAGCGGCGGGGCCGCGGGCGGGTGTGCTGTTCAG 195 36 100.0 35 .................................... CTGGGGCCGGGCGTCACGTCGCTGCCGGAGGTCAT 266 36 100.0 34 .................................... TTCACCGCGAACGAGGACGGCGGCGGGGTGCGGC 336 36 100.0 40 .................................... TTCACCAGCCCCTACGGCTGGCGTGACTGCGTGTCCGGCG 412 36 97.2 36 .....T.............................. CTCGCCGGCACCGGCCCGCTGCGCTACGCCGAGGAC 484 36 100.0 37 .................................... CGTAGTCAGACGGATACCGGATGTCACGGATTGAAGA 557 36 100.0 37 .................................... GACGACTGCCGCGAGGACCTCGAGACCACGCGCGCAG 630 36 100.0 34 .................................... CCGCAGGCGCGGCCCCAGGCATTGCCTCTTCCTG 700 36 100.0 36 .................................... GGCAACGGCGGCATCGACTGGCAGCCCGCGGTCTGG 772 36 100.0 34 .................................... CTCGAGGCGGGCCGCATCCTCGGCGAGGACGTGG 842 36 100.0 35 .................................... TCGAACATCGAGCAGGACTGGCTCGGATTCATCCG 913 36 97.2 36 ............T....................... TGGCACGAGTACCACGGCGAGCGGTACCTGCGCCGC 985 36 97.2 36 ............T....................... AGCCGGTCCGTCCCCTCGCCCACCTCGTGGGCCCCG 1057 36 97.2 35 ............T....................... GTGAGGATGTAGCCGGGGTCGTCATCCTGCTTGCC 1128 34 83.3 0 ............-.C....A...........-..CG | ========== ====== ====== ====== ==================================== ======================================== ================== 16 36 97.4 36 GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Left flank : CTCATGGCCGTCAGCGGGTCATTCCCTGGCCACCTATGGGCAGCTTTTCA # Right flank : GATCCAGGTCCGAGGCGGGGTAGGGCTCAGACCGTGTTCCTCCCTGGTCAATTCGCTCGACTCTGTCGAGGGCGAGGCGCCTCGACGGGGTCGAATCACGCACGTGACGTCCGCGCCCGTCGTCACGCGTTCGCGAGGTCTTGGGCGTGGCTCCATGGAGTGAGCATCAGTAGCGAATCTGTTGGCTCGCAGCCAAGGCTGAAGGCGAGTCGGGGAAAGGCCATGCCCTGGGCCAATGCCCGGCGCATGGCGTCACGTGCTGTCCCGCGTTGAAGTTCATCCGGCATCTCCCCTACCCGCATGCGCGACCGGCGCGCAGCCAGCTGCAGCAAAATTTCGGCGACGAGCGCGGTCTATATCAACGCGGCCGTCTAGCCCGCGGGAAGCAGTCGGCCCCGTCTCGCCCCCTCACACCACCAGGGACAGGAACGCGCCGAGCGCGAAGCCGACCACGGTGAGGAGCCCGGCCCTCTCCCCGCCCTTCTCGCGGGCCTCGGGGA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [6-6] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //