Array 1 93828-95808 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNKY01000028.1 Erwinia sp. OLMDSP33 NODE_3_length_197236_cov_30.2575_ID_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 93828 29 100.0 32 ............................. CAGTGCCGGGAGGTTGGACGGGAGCCACGGGA 93889 29 96.6 32 ............................C AGTGCCGGGAGGTTGGACGGGAGCCACGGGAC 93950 29 100.0 32 ............................. GAAATTACCATGAGCACAGTAACCGCTGAAAC 94011 29 100.0 32 ............................. CAAAGGGGGGATTTGAAGGGAAAGGGGCAGAA 94072 29 100.0 32 ............................. ATGAACAAGCTACGTTATTTCCGGAGAAAGGT 94133 29 100.0 32 ............................. AATGACCATGCATCCACTGAACTGCATACATA 94194 29 100.0 32 ............................. GCGCGGAACGCTGTTACGAAACGGCAGCGTGG 94255 29 100.0 32 ............................. GTTTTATCCAACGAGGTAAATTTACTGAATAA 94316 29 100.0 32 ............................. CCAATCGAAGAACATTTACACCATCCATGTAT 94377 29 100.0 32 ............................. CTGTATTCAGAGTCGGATCTGGTTCACTTCGC 94438 29 100.0 32 ............................. ATTTTAGAACCCTTTGTGTACCCGGGAACTTG 94499 29 100.0 32 ............................. GGGATGCTGCGCAAGATTGAGGCGCTGCTGGC 94560 29 100.0 32 ............................. GTTATTTTCGAGTTTACTGATAGCGAGGCTGA 94621 29 100.0 32 ............................. GCGAGAACGAGGTGATCGCCGCCCCGCGCGGC 94682 29 100.0 32 ............................. GTGTCCTGACGCCTGAACATTTAATCAAACCC 94743 29 100.0 32 ............................. CGCCCGGCACGGGCTTTTACCATGCCGCAGAC 94804 29 100.0 32 ............................. CCACGATTACTTTTGACTATGAGCATAAATTA 94865 29 100.0 32 ............................. CAACGCCGGTTTTCACGTCACGATTAATCAGC 94926 29 100.0 32 ............................. CGTGAACTCGTGATTGTACTTTGACAGCGCTG 94987 29 100.0 32 ............................. TATCTCGCTCAGCCAGCAAAACCACAGTAGAC 95048 29 100.0 32 ............................. AAAGCTGTACAGGCCAACTGAGCAGCAGAATG 95109 29 100.0 32 ............................. ACCCGAATAAGCTGTTTCCGGGAACAACGTGG 95170 29 100.0 32 ............................. GGCTGGGTATGGATTTAAAGAGCGCGCCTCCT 95231 29 100.0 32 ............................. CTGTTTACCGAGCAGCACCATGGTGCGCACGT 95292 29 100.0 32 ............................. GTTGTGCCTGTGCCGGTAACTGTTGCCGACTG 95353 29 100.0 32 ............................. CTACGTCAGAGATGATGGGCAACTGATAGCCA 95414 29 100.0 32 ............................. AAAATAATCGGCTATTTTTTCTCCGGCAGCCC 95475 29 100.0 32 ............................. GTGTAGACCTATTTGCAGCAATATTCGCTCTT 95536 29 96.6 32 ............................T ACTTCCGTTTTTTCGTCCTCATTTGAGGATAC 95597 29 100.0 32 ............................. CTTCATTCTGTGTTGCTGAACACTCATAGAGT 95658 29 100.0 32 ............................. CCCGCAAAACAGTGCGTTTTGTCGGTAACTAT 95719 29 79.3 32 .....T....TC....C..AA........ AAAAAATCCACTAAATCTTTTCTCAACTTTAC 95780 29 82.8 0 .C.C.......G.A.A............. | ========== ====== ====== ====== ============================= ================================ ================== 33 29 98.6 32 GTGTTCCCCACATGCGTGGGGATAAACCG # Left flank : CTTATAGAAGACGTGCTTGCTGCCGGTGGTATTTCGCCGCCGCCGCCGCCCGCCGATATTCAACCGGTAGCCATTCCCGAACCGTTACCTTTTGGCGATAGTGGCCACCGGAGCTAATCAATATGAGCATGGTAACCGTTGTCACCGAAAATGTACCGCCGCGTTTACGTGGCCGTCTTGCTATCTGGCTTCTGGAGGTCCGGGCGGGAGTGTATGTGGGTGATTTATCGCGGCGAACCCGGGAAATGATATGGCAACAGATAACTCAGTTAGCCGAAAGCGGTAACGTTGTTATGGTCTGGGCGACAAATAATGAGTCGGGATTTGATTTTCAGACGCTGGGTGAAAACCGTCGCCTGCCGGTGGACATGGATGGATTGCGATTAGTCTCTTTTCACCCTGTTAATTATCAATGAGTTAGCGCTCTTTAACAAACTGAAAAAATCGGTAGAATAGCAGGGTGATGTAAAACTCTTTATATTCAATGGTATAAGCTAAGA # Right flank : GTTGGATAATCACCTGCCGTGGTGGTGATGAAAGGCATGTCCTGGTAACGAGGACATAAACCGCTAACTGATTTTGAAAAATAGCCGCGCTGAGGTTGTTGCCTGACTTGTGGCGATCAATCAGGGCGGAAATATACTGCTGATAACCATGACGCTGCAATGACGAAATAATCTGTTGTCAGAGGACGTCAGGGAAAATAGCGTATTGTGTTTGAGCTTGCGAAAAAACACCTGGTGATATTATCGCGGTGTTCGTCTGGCAATATGGCCGGGCAATTAAATCTATTTCCGGTCAGCAGTGATTTTATTGTCCGGGTGGCGTCTGAGCGGTTTTCCCTGGGGTTGGCTGTTTGAGTACTTTGTCACAAGGTCAGTTTTTTCTGCCTGCATAACCGGGGATGATGGTAACGAGTTAACGTTCATTCGTAAGCTGTACTTAAGTGTTGTGATGACTGTGCAGTAGTACTGGTGTTGACTTTTTAATGCATAAGAATTAACTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATGCGTGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 101481-102546 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNKY01000028.1 Erwinia sp. OLMDSP33 NODE_3_length_197236_cov_30.2575_ID_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 101481 29 100.0 32 ............................. AGATAGTTTCAGAGTTGGCAAAGCTTGATACT 101542 29 100.0 32 ............................. CACAGGCTGAGTTTACCAGAGCGGCGAATATG 101603 29 100.0 32 ............................. GATGGGCCGCACTTTCAGTTGCCATTTGCGCC 101664 29 100.0 32 ............................. ACCGCCGCCAGGGCGTTCTACACCCGTCACGA 101725 29 100.0 32 ............................. CCCGTCGCCTGCGCCTTGATAACCACGTTCAT 101786 29 100.0 32 ............................. TTACTTAACAGGCTCTTTAACAATATGGATAT 101847 29 100.0 32 ............................. CCCGCAACGCTATGCCTGTTATCGATCCGATG 101908 29 100.0 32 ............................. GACAGGCTGCGCAACACTCCAGGCTTGCGACA 101969 29 100.0 32 ............................. CGCTTTTGCCAGTTTGTTTACCAACAATCAGT 102030 29 100.0 32 ............................. ACAATAAAAATCCTTCCCGTACCAATAGGAAG 102091 29 100.0 32 ............................. TTAGGTGTCAGGCCAGGCGGGGGATCGCGATA 102152 29 100.0 32 ............................. GTAGTTGGCAATGCGCCACCAGAACATAAAGC 102213 29 96.6 32 ...................C......... CAACATTTCGTTGTATTTTTCATAGGCTTTTG 102274 29 100.0 32 ............................. ACAATATTGGCCTCACTGAGTTTGAGATGTCC 102335 29 100.0 32 ............................. ACCTGGATGGAACAGTTGATGGTTCGAAGGCC 102396 29 100.0 32 ............................. ACCTGGATGGAACAGTTGATGGTTCGAAGGCC 102457 29 100.0 32 ............................. ACCTGGATGGAACAGTTGATGGTTCGAAGGCC 102518 29 96.6 0 .................A........... | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.6 32 GTGTTCCCCACATACGTGGGGATAAACCG # Left flank : GATAAAACGGCCAGCGACACCTATCGCTATCTCAACTTTGACCGGCTGTCACAGTACACCGAAAAAGCAGACGGCGTGATTTTTCAGACTGCGGTCTGAGAAACGCAGCGTGTTGCTGCCACCTTACTGATGACTGAAACGGCCTGAGGAGACTCAGGCCGTTGTTTTATATAGTCAGATTGCAGGGTGACGATAACCTATTCTTTCTCCGGATATGGTACATAATTAACCCGCCCGGCAAGATCACCGTTTTTCATTATGTTGCCACTTGCGCAAATCATGCTGAACGATGGTTTGTCCAGTCATTATCGTCAGTTGCTGAAAGCGGAGGAAAGCTGTATTAACAGCAGAGGATGTCTCTTTCCCTGCGTTGCCGTTGCAATTTATGGAAGGATTTATAACCTTCTCCACTATGCCGCTTAACAACCAAAAAATGGGAAAAAAATCGGTAGATTTTTTTTAATAAAAAAAGCATTGTAAATCAGTTGATTATTCTTAGA # Right flank : GCAGGTGAATCAAAAGAAGGCGCTTGCTGGCTGGCAATCGGCTCATGTCGTTGGTGCGCGACATGTCCCCTCGTCGGGTCTGGCAATGACGCGCGCATTAACCCTCTTTTTTACTCCTGCGGGTATCGCTCTGCTGCGTTGCTTGTATGCGATATTGTTCGCCGCTGAATGTGTTAGCAAACGCTGTTTTTTTACCGCCGGACTGCAATAATTAACCGGTCAATAATAATGTGTTCGCCGAAAGGGACGCTTGTGCGACAGAGGGTAGGAGGGCAGCGCTATGGAATATGAGTTATTACGCGATGTCACCGGTCAGCTGAAAATGCGGATGTCGATGGGGCATGAGGCGGTTGGCCACTGGTTCAATGAAGAAGTCAAACAGAACCTGGCGCTGTTGTCGGAGGTGGAGCAGGCTGCTGCCAGCCTTCGGGGTAGTGAGCGACAGTGGCAACGGGTGGGTCATGAATATACCCTGTGGATGGATGAAGAAGAGGTAATTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATACGTGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //