Array 1 170558-168124 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAAJY010000005.1 Enterobacter mori strain NSE2 NODE_5_length_253025_cov_28.821292, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 170557 28 100.0 33 ............................ TAACTCTCGGTCAAAAATTAAAACCGGATATTT 170496 28 100.0 32 ............................ AAATGCGGTATCAGCAGCTTAAAGAATTCTAT 170436 28 100.0 33 ............................ GCCAATTTTCTGGCGCAAAAACTCCGTCGAGAT 170375 28 100.0 32 ............................ AATATTGTTGCGGCGATCCTCTTCGGCGGCAA 170315 28 100.0 32 ............................ AAAATACCAGCGGGCAAGGAAGCATCTGCCAC 170255 28 100.0 32 ............................ ATCTACCAATAAGAACCGTCCCCGACCAACCG 170195 28 100.0 32 ............................ ATCAGCACCTCAGAGCAGTATGCGACGGCTTT 170135 28 100.0 32 ............................ AAGAATTGATAATCCCCAAACGGGGTATGTCC 170075 28 100.0 32 ............................ AGTTAAGGTTAAGTAGTGGCGATATTGCCACC 170015 28 100.0 32 ............................ TTAAAACCACACCCATTTAACGCCCTGACGGG 169955 28 100.0 32 ............................ GACGAAAACGCGAGCTCGATGGTTCGCGCCTC 169895 28 100.0 32 ............................ CTTTGCGGCAGCTGTAAGCGACCATAGCGCTT 169835 28 100.0 32 ............................ AGTGGGGAGATCACGTCACGACGACGAACGTA 169775 28 100.0 32 ............................ GCTACAGATTCCCGACCTTTAGAGTAGTGGTC 169715 28 100.0 32 ............................ GCCGTATGGGTATTACGAAAGACGAATTCATT 169655 28 100.0 32 ............................ AGAACCCGGCCGCAGGTACGGCGCGGACTTCC 169595 28 100.0 32 ............................ ATGATGATCCGCTTATGCTGCTGGCTGTCTGG 169535 28 100.0 32 ............................ GCCTGCTGTGACTGTATTTTTGCGAGGTTAGT 169475 28 100.0 32 ............................ CGGAAGAAGCTCAGATGGAATAGGTTGGTATG 169415 28 100.0 32 ............................ CGAATCCGAAAGAAAACACCGCGCAGACCACG 169355 28 96.4 33 .........................C.. GGAGTGGCTGCCGGTTATTCCTGCCGGTTCGTT 169294 28 100.0 33 ............................ AGCGAGGACGGGCGTTAAGCTGGCAACATTACG 169233 28 100.0 32 ............................ GACGGCGTTTATTCATCGCGCAATTTTGATTA 169173 28 100.0 32 ............................ GAAGAGGAAGGGGCCAAAGAGGAAGAGGAAGA 169113 28 100.0 32 ............................ TGACTTCGCGGTGATGCTCACCACCGGTGAGA 169053 28 100.0 32 ............................ TGATGAGTCCTGCCGCCTTCCCTCGCCGGTAT 168993 28 100.0 32 ............................ TGCTGGCGCGCCGTGGCAAATGCCGGACCCAC 168933 28 100.0 32 ............................ ATGACGTCTTCATAATCCAGCCCCTGCAGGGC 168873 28 96.4 32 ....................T....... AGACAAAATCTATAAGTTTTTTGTCACCTATT 168813 28 100.0 32 ............................ AGCCAGCCCCTGCAGTCCGTCAAAATTGCCCT 168753 28 100.0 32 ............................ AGCGGTGGAAGATGTTCTGCTGGTTGTTCCAG 168693 28 100.0 32 ............................ TTATAAATCCTTTTAATACAGCTTCATCATGC 168633 28 100.0 32 ............................ TGCACGCGGTCACCGAGAGAATCGTTCTCGTC 168573 28 96.4 32 .......A.................... TTTACGCTGCTGACGGCCTGCGAGGGGATAGA 168513 28 100.0 32 ............................ CGCAGCGACTTTTATGACTTCCGGATTACCCT 168453 28 100.0 32 ............................ TGATTAGCGGCATTATTTTGAACTGGCTTCCC 168393 28 100.0 32 ............................ ACCAGCAACAAAGACATGAACGCTTTTACCTG 168333 28 96.4 32 ...............A............ CTACGTTGTCCACCAGCGTGCCGGTCATATCG 168273 28 100.0 32 ............................ AGATAAAGTAAAACCCGCGAGGTGCGGGTTTG 168213 28 85.7 32 ..A..........G...T......A... CTCTGCCATTACGCACTGATGCGAGCGAACTC A [168208] 168152 28 85.7 0 A.C........C...C............ | C [168127] ========== ====== ====== ====== ============================ ================================= ================== 41 28 99.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGAAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGTGTCCGTCCCGCGCTTTTACGGCGGGCCACGTTACGTTCGTTAATCCCGGTGACGCGCAAAATGTCCGCTTTAGACATCGCCGTCCATTCATGAATATTGTCGAGGACGCTGACGGGTAAGCCCTGATTGAGAAATTCAATCAGCCGCATTCCTCTGTTTGCTGGTAATCCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTCTCTGCGCGGGGATCCATGTTCTCATGTTACCTCCTGATTCATGTCATTTGTCATGATTAAGTATAGCCATTTGTCAGGAGGAGTGAAATGAGTGTTTTTCATGCTCGGGGTATGAGAAGAAGAGCTTTCTACCCTAATTTTTAGGGTGTTCATAATGTATTGATTTTAAATGGATATTTTGGAAGGTAAAAAAGAGGGTAAGAGAAGGGCTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGGGATATTATTTCA # Right flank : ATAGAAAATAAGGTCTCATCCCCCTTACTCTCCACACTGTCGAACAGACAGCCCTGAAGCTGAAACGAACGGCCAAATAATTGTTCAAATAATCGACTGCACTACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTCAAAACGCAGCAAAACAGTTTCAGCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 182748-180377 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAAJY010000005.1 Enterobacter mori strain NSE2 NODE_5_length_253025_cov_28.821292, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 182747 28 96.4 32 A........................... TGGCAGTTAGCGCTTCGGTTGTCCATTCATCA 182687 28 96.4 32 A........................... ACCGGATGATGACGCGCCAGCCCAGATCTCGT 182627 28 96.4 32 A........................... ATCACGCTTTGGTTTTGGTTATTAAATTGTAA 182567 28 96.4 32 A........................... TGCCGATCACGTAAACCGGATCCTTTTCTCCG 182507 28 96.4 32 A........................... ACGCTGACTGGATGCCGGTGAGCGGCGTAAAG 182447 28 96.4 32 A........................... GGATGAACTACTGATGAGAGATAAAAAGAAAT 182387 28 96.4 32 A........................... AGAAAATTGACGGCGATTCATCAACGGTGTTG 182327 28 96.4 32 A........................... ATTAATCATCTTCCTTGTGAGTGCTCGCGGTA 182267 28 96.4 32 A........................... GCAGGGTATCTCCGAGCTGAAGGGCGAAAAAT 182207 28 96.4 32 A........................... TGTCGGCACCGACAAAACCCACCAGCATGCCA 182147 28 96.4 32 A........................... TGCTACGAAGCTGAGACAACTCCTCAATTACA 182087 28 96.4 32 A........................... CAGCACGCGGCCATCAAGCATGCGCAGTCCAT 182027 28 96.4 32 A........................... AGAACCAGCGCGGTGAGCAATCGGAGCCTGGC 181967 28 96.4 32 A........................... GCCTGGCCGGTTATGTTGGGGAAGGAAACACA 181907 28 96.4 32 A........................... TGCTGGGCTTCCTGCTGGTTTTCTGGTTCGCG 181847 28 96.4 32 A........................... AGCGCGGCCACTTCTCTTAGCGTCATGTTCAG 181787 28 96.4 32 A........................... ATCAACCCCCGCCACGCTTAAATTAACAGGCC 181727 28 96.4 32 A........................... AGATTGCTTAACTCAAGCCGATTTCGCGTCTC 181667 28 100.0 33 ............................ TACTGGCGAATCATCAATACTGCGCGAGTGAAC 181606 28 100.0 32 ............................ AGACGCCCAGGGAAATGTCACTGTTACTGTTA 181546 28 100.0 33 ............................ CTTTTCAGAAAAGTCATGCAGCACGCCGCTGCT 181485 28 100.0 32 ............................ TGGCGAATGGTTAAGCCGTGGGCAGAGAACGT 181425 28 100.0 32 ............................ TGAGCGATATCGACTACACCCGCGCCCAGACA 181365 28 100.0 32 ............................ ATCTAAAAAAAGAGCATGAGTCCTGCCGGCAA 181305 28 100.0 32 ............................ CTGTCGACCGTTATATTCCCTGCTCGATGATG 181245 28 100.0 32 ............................ TGAGAACACCGAAAACACTGGTCTCGCTGCTG 181185 28 100.0 32 ............................ AGAACCCAACTCAGCGGTCGCTTATAAATTTC 181125 28 100.0 32 ............................ TTCACGCCCTGCGCGGCGCAGCCATCCCACAC 181065 28 100.0 32 ............................ GTACGGCGCAGCTTTGCCAAGCATGAATGGAT 181005 28 100.0 32 ............................ AGTTAACACGCGCAGATCTCGATGAGGTCAGA 180945 28 100.0 32 ............................ GACCAGACGACCTTACAGCCGCCGGTGTAAAA 180885 28 100.0 32 ............................ AGCTCGACATATACAATGCCGCGTTCCTTGCT 180825 28 100.0 32 ............................ TTGCAGCTGTCGTAATAGTGATACTCAACATG 180765 28 100.0 32 ............................ AGCTGCTGCATCACCGGCGCGGAGACGCTGAT 180705 28 100.0 33 ............................ TTTCACTATTTCCCACGTCACGCGGACCTCCAG 180644 28 100.0 32 ............................ TTCGCAAGGCCGGAAATCTTCGGGCGGTGATC 180584 28 100.0 32 ............................ TTTAACTGCTGGCATGGCTAAACATACTAGTT 180524 28 100.0 32 ............................ TGGCGTGTCTGCTCTTCAGCGATAGTCTTATT 180464 28 96.4 32 ...............A............ AATGAGCAACATCGACAAACAGGCGCTACAGG 180404 28 78.6 0 ...........C.........AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 40 28 97.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCTTACCTGGAAGAGGTGAAATCCGGTCTCACTGAATCAATGCGTGATTTTCAGGTTGTGGAATTTGAGGACGATGCGGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGCGAAATGTTGCCGCACCTCACGGGGCTACTCCATGACATTATGCACTCAATGGCGGCAGATGTCGTCGCGCCGCACAGCGCCGAAACGATAATCCACATTCTTTCCTGAGCGCGATCCGAGGCGTCAGGGAGTTCCTCCGACGCCATTGGTTTATACCCTTTTTCTGATATTTACGTAACATATTGATTTATATGGTGCGAATTAACGTGCCGGAAAAAAGGGTTTTATGCGTAAAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTTGATTTCATTCA # Right flank : AAACTACCCTTCGAAAACATTCACCTTACCTATTTAAAACTTAATGCCATCAAACCTGCACTCTCTATTTTTCACAATAAATAAAAAATTCATTCACACACAAATTATATTCTAGCCAATATATTATTTGTAAAAATAATGCATTAAATGAAAAAGTAATTTTTCGCTTTATTATCACGGCAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTCCGATAACATACCGCGCATTCAACACATTGAAATAAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGTCGCATCCAGGTAAATGGCGGACGCGTTGAATATGTCACCCAGGAAGGCAAAGAGTCGTTTTACTGGAATATTCCCATCGCCAATACCACAGCGATAATGCTGGGAATGGGGACATCCGTTACGCAAATGGCGATGCGGGAGT # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //