Array 1 152682-154430 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNI010000025.1 Clostridium sp. P21 NODE_2_length_363825_cov_116.573168, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 152682 36 86.1 30 .CG...T..G...A...................... AGAGGAGGATATAATTATGTTCAAAATTCA A [152687] 152749 36 100.0 30 .................................... AGAAGTTTAAAATAATCACTATAAGTGATA 152815 36 100.0 30 .................................... TTATCTTATAGAGATGAAAATAAGTTTATA 152881 36 100.0 30 .................................... ATTTAGATGGTGCAGTGCCTTGTATCGTAA 152947 36 100.0 30 .................................... CAACCTAACAGGAGATGAACTAGAAAGATT 153013 36 100.0 30 .................................... GCTCCTCCTACTCTTGCTATTCATCTTCTT 153079 36 100.0 29 .................................... TGATTACAATAGAACAACTAAAGAAATTA 153144 36 100.0 30 .................................... AGAAGAAGAATTACAGTTATCAATAGATAA 153210 36 100.0 30 .................................... AAAGATGACTAATCACTTACTTACAGATGG 153276 36 100.0 30 .................................... AGGTAGTAGTGTGGATATATATAAAAGATG 153342 36 100.0 29 .................................... TGAACCCAGTGGCTCCATTAGGCTTTTTG 153407 36 100.0 29 .................................... GAATACATACATAGACTTGAACAATTACC 153472 36 100.0 30 .................................... TCTTATTACTGCTATTCCTGCACTAATACA 153538 36 100.0 30 .................................... CAATCCACAAGCCTTTAAAAATGCATAATT 153604 36 100.0 30 .................................... ATGAATATATAATATAAGTATAGCGAACGC 153670 36 100.0 30 .................................... AAAAAATGAACTGCCAGTAGCTAGTGAAAG 153736 36 100.0 30 .................................... TTAGAAAATGTAATAGCTCCAATTTTAAAC 153802 36 100.0 30 .................................... TCAACTGATGCAGTAAGTACTAATACATCA 153868 36 100.0 29 .................................... ATTGTACAGATGGAACTATGGCTTTTAGC 153933 36 100.0 30 .................................... TTATTGGAAAAAGAAGTTAAGGGAAGAAGA 153999 36 100.0 30 .................................... AATTTTATTTCTGCGTCTTCATCTCCCACA 154065 36 100.0 30 .................................... GTACACATTAATACATATGAATAAGTATAA 154131 36 100.0 30 .................................... AATATTAATGAAAACCTATGCTGATGAAGT 154197 36 100.0 30 .................................... TGCACCAATTGCTTATGATGAAGCTGCCAG 154263 36 100.0 30 .................................... CCATTCAAGAATATCATTTGTTGTTTTTAT 154329 36 100.0 30 .................................... ATTGCTAATCCAGATGAAGAGAATCAAGCA 154395 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.5 30 GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT # Left flank : ATTACTATCATACCAAAATACAATATGACGTTTCTTTCCATCACCTAATGGTTTTGAAAATAGTTCTTTAAGAAAATTTCTTATTTCTTGTAAGTTCATATGCTCACCTCTACGTTTGCTCACTCATTATAAAATAAATTATATATTTCTTCTTCTAGTTGACAAAGTTAACTCTTATACCTTTCCCTTTAATAGACTTTAGTAGCTCGTCACTTATTGATAAATCGCCCAAATTACCTTTAGCTAATAATTTAGGATATTTATTTATATCTATAAACTCACTACCACCATTTTCTTCATTATAGTTAAATTCTCTAAATTGAATTCTGATTTATCAAAACTTTTGAAATTTTCAAAAGCAAAACTCTTTATCATAATTTCACCCACTCATTTACTTAATTTTAATATAATTATACCATTCTTAATATCTAGTATTCTACATTTATCACAAAAACTATTATTATCTAAAAATAGCATCTCTATTTAAGTACTTAAAAGTT # Right flank : TACCAATTATAAAAGCCATTGAAATTGCTATGTTTCAATGACTTTTATGATTCTAAAAAACATTTAATTGACTTGAATTTATATTTTTTTCTTGTGGTTTTGCTGACCCTACTAAAAATTTCATTTCAGAATATTGCTTTTCTGTAATTTGTAAATACCTAACTGAACCTTTAAGTGGTAAATTTCTTTTTAATCTTATAATATGCTTATTTACACCATCTGTTCCATTACAAATTCTAGAATATACAGAGTACTGAATCATTATATATCCATCATTCAATAAAAATCTTCTAAAGTTTTGATATGCTTTTCTATCTTCTTTTTTTACAACAGGTAAATCAAAAAATACAATTAATCTCATAAATCTTCTACTCATAATAATGATATTCCAATTGTTTTATCAGAGGTAACTTCAATAATCTAAAATCCTTTTTGCTACAAGCTGTTGTATAAGAAGATATCATTTTATCAATAGCATTTAAAATAGAGTGATTTTGCCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 108619-109434 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNI010000007.1 Clostridium sp. P21 NODE_13_length_166271_cov_130.075862, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 108619 30 100.0 37 .............................. ACAACCATTTGCTTTATCTGTTTCATAAGCATTAACA 108686 30 100.0 36 .............................. ACTGTATCTAAGCATCTAACTCGTCCACTATAACCT 108752 30 100.0 35 .............................. TTTACCATATCATATGTATATGCTGTAAGGGTATA 108817 30 100.0 36 .............................. AACATTTAGTGATGTAGATATAGAAAATATAAAAAA 108883 30 100.0 35 .............................. GGTTCATAGCCATGTTCTTTCATCCAAGCAAATAA 108948 30 100.0 34 .............................. TAAAACTTAGGATGTTCGTTAAGCCGCCCTATAA 109012 30 100.0 36 .............................. GATATATCAGCTGCCATTAAGTCGATTACTGGAGTA 109078 30 100.0 36 .............................. TTTGCGACTGCAGCAGTTACCTATGGTAAAGAAACA 109144 30 100.0 36 .............................. TTTAGGTGCATTGGTATAATTCCAAGCAAAATATCT 109210 30 100.0 36 .............................. CTGTAATACCCTTTAAAAAAAGATTTTTCTCTAAAG 109276 30 100.0 34 .............................. TCTATTTTAGTAATTGTGTCACTCTTTACTTTAT 109340 30 100.0 35 .............................. TAAGGATAGCTTTGTACTTCCAGTTAAACCACAAC 109405 30 90.0 0 ....................A....A...C | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 99.2 36 GTTGAACTTTAACATAGGATGTATTTAAAT # Left flank : CATATATGGGCTGTTTTTGCTTGTAGAGGTGCGATGCCAAAAGCTATACAAGATGTGAATAAAAAAATCTTCTCAGAATGGCTGCCTAATTGCAAGGATTATGAAATTGCAGCAGGTTATAATATTGAAATGTACACTAATTTGGATGACTATCCAAAAGGTAATCAGGATGAAAACTACTACAGCGAAATATGGATTCCTGTTAAGAAAAAAATAACTGCATAGAAATAATTTAAATCATCATATTCATTCTAATCTTGAAATGCTAATAAATTTGATTTTATATTATAAAATGTAGTTTTAACTTTAATTTAACTAAGAATTTTACCAACTGAAGCTAGAAATAAAGTACCTTTAAAGCTTTGAAATATAAGGCTTAAGGGTACTTTTTATATTATATTTTTAAAAATCAAAAAACAGCTGGTAAAATTTTGAGAAAATCCTTTAATTTCAATAGATTAAGGGGTATAATAAAAAATAAGAATGGCTATTTTACAGTG # Right flank : CTAAATGCTATTGCTATAAATCAGCAGTAGCATTTAGTTTTATGAATGTTTAAATTGTACTGTTTGTGTTAAAATAATTGTTAAGGAAGGAAGTGGTTAAGTGAAAAAGATTCCTATAGGTATAACTGATTTTAAAGGAATTATAAATGATAATTACTATCTTGTAGATAAAAGTTTGCTTATAAAAGATATAATGGAAGATGGATCAAAAGTTTTATTATTACCTAGGCCAAGGCGTTTTGGAAAGACTATAAATATGAGTATGCTTAAGTATTTCTTTGAAAAAACTGATGAAGATAATAGCTTTCTTTTTAAAGAATTAGATATATATAAACATAAAGATGTTATGGAAAGACAGGGGAAATATCCTGTGATTTATATAACTTTTAAAGATTTAAAAGACAAAAATATTGATAAATGTTATGAAAAGATAAAAGAAATTTTAAGTGAACAATATAATAAATTCAAATTTATATTAGATAGCCTAAGTGAAGTAGATA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 111407-113137 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNI010000007.1 Clostridium sp. P21 NODE_13_length_166271_cov_130.075862, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 111407 30 100.0 36 .............................. ATCATACCTAGATTATCCTTCGCTATATAGTAAGTT 111473 30 100.0 35 .............................. TATTTTAAAACCACTTTATCAATTCTGTTTAAAGT 111538 30 100.0 36 .............................. TTTAAAGTTGCTTATGTAGATGAAGATAAGCTTAAA 111604 30 100.0 35 .............................. CTAAAGGAATATTCAATTCTAATAAAGCATTATAT 111669 30 100.0 35 .............................. GAGAATGGGCAAATTATAGGAGTTGTAGGTAATGT 111734 30 100.0 36 .............................. TAAACAAATCCCCCTATATATGTAAACTTTAAATGC 111800 30 100.0 37 .............................. TAGATGTACACAAGTTTCCCCATTCCAAAGCAACCAT 111867 30 100.0 35 .............................. TTTGCCACATAAAAATAAGCTACTATAGTACGGAA 111932 30 100.0 34 .............................. GTTACCTTTTGTGGGTTTCTAGCTTGTACTATAG 111996 30 100.0 34 .............................. AAAATTGCTAGATTAATTGTCCTGCTGCCTATAT 112060 30 100.0 34 .............................. TGGTGAATATTATGGGCTAACTTCAAAGCCACTT 112124 30 100.0 36 .............................. AAAGAGGAATATGGAATATATCTTATACCTAGCATT 112190 30 100.0 36 .............................. TGGAGCTATAGGAGAATTACAAAACGGCGGGCTTAA 112256 30 100.0 35 .............................. TCAGTACCAACATATTAAAATACATCTGCTTAAAA 112321 30 100.0 34 .............................. CCAATTACTCCTGGTAAACTACCATCCTCTGCAT 112385 30 100.0 35 .............................. ATATTACTAAGTGCATTTAATGCTCTATCTATCTG 112450 30 100.0 36 .............................. GCAAATGCTGAACTTATAACTACAGTTACAAACCAC 112516 30 100.0 36 .............................. TAAATTTAGCATGAGAAATGATCCAAAGCCAGTGGA 112582 30 100.0 36 .............................. GTATATTCACCTAATGCTAATATCACATAATTTTTA 112648 30 100.0 36 .............................. AAATCACCTCTTTATGTATATTGTATACGATATATC 112714 30 100.0 35 .............................. TGACGTAATTACGAATATACAACGTTCACCATCTT 112779 30 100.0 36 .............................. AATATTTCCTCACTAGATTCATCATTTTCTATTTTT 112845 30 100.0 35 .............................. TTTCAACCATTTATTTCACCTGCCTTATAGCACCT 112910 30 100.0 36 .............................. ACACTGTTTCTCCACCAGAAAACCACCTAAGAGCTT 112976 30 100.0 36 .............................. TGCACAGAATCATAAGTCCATTCTGATTTCGAACAT 113042 30 100.0 36 .............................. AACTTTGCCAAAGTTTCCACTTCCTTTCCTATCTGT 113108 30 83.3 0 ........T.......T..CA........C | ========== ====== ====== ====== ============================== ===================================== ================== 27 30 99.4 35 GTTGAACTATAACATAGGATGTATTTAAAT # Left flank : TGGAATATTAGTGGCATTAAATAATAAATATAGAGTAAAATCTAATAGGGAAAGTGGTTATGGAAGATACGATATAATGATTATTCCAAAGGATGCAGAAAAACGAGGTATAATAATTGAATTTAAAAAAGTTAATAAAAGAAGAAAAGAAACTTTAAATACAGCAGCTGAAAATGCATTAGCTCAAATAAAAACTATGAATTATAAACAAGAGCTTATTGAACTTGGAGTAAAAAATGTAATAGAGCTTGGAATTGCTTTTGAAGGTAAAGATGTTCTAGTATTAACATAAAGTGTAATACTAACTTGAATTAACTAAGAAATTTACCAGCTGAAGCTAGAAATAATGTGCCTTTAAAGTCTTGAAGTATAAGGCTTAAGGGTACTTTTTATATTATGTTTTTAAAAATCAAAAAACAGCTGGTAAAATTTTAAGGGAATCCTTTATTTTCAATGTATTAAGGGGTATAATGAAAAAGAAGAATGGCTATTTTGCAGTG # Right flank : CTAAATGCTACTGCTATAAATCAGCAGTAGCATTTTTTATGAATGTTTAAATTGCACTGTTTGTGTTAAAATAATTGTTAAGGAAGGAAGTGGTTAAGTGAAAAAGATTTCTATAGGTATAACTGATTTTAAGGAAATTGTAAATAATAATTACTATCTTGTAGATAAAAGTTTGTTTATAAAAGAGATAATGGAAGATGGATCAAAAGTTTTATTATTACCAAGGCCAAGACGTTTTGGAAAGACTATAAATATGAGCATGCTTAAGTATTTCTTTGAAAAGACTGATGAAGATAACAGCTTTCTTTTTGAAGAATTGAATATATATGAACATAAAGATATTATGGAAAGACAAGGAAAATATCCAGTTATTTATCTCACCTTTAAGGATGAAAAATATTTAAGTTGGAAAGATTGTAAAAGTGGGATGAAATTTGTAATAGGAAGTGAATTTAAAAGGCATAAATATCTTCTTGAAAGTAATATAATGGATGATGAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 115113-116753 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNI010000007.1 Clostridium sp. P21 NODE_13_length_166271_cov_130.075862, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================================================================================================== ================== 115113 30 100.0 36 .............................. TACCAAACATATTTAACATAACCTTTTGATACTTTT 115179 30 100.0 35 .............................. CCTTGTAACTTATAATAATGTTTTCCTTCAATAAA 115244 30 100.0 35 .............................. GAGAATGGGCAAATTATAGGAGTTGTAGGTAATGT 115309 30 100.0 36 .............................. TTGCCTGCGTTGTAAGAATGTCTCCGCCACAGCTAC 115375 30 100.0 36 .............................. TTGTACCACTTCTCCTTTATGATAAAATTTTATTGA 115441 30 100.0 36 .............................. GCATCAGAAACCTCTTTATGTCCTAACTTATTTACA 115507 30 100.0 36 .............................. TGTGCTAAGTCACCTTCATATACTCCATTTATTAAA 115573 30 100.0 37 .............................. CCGCCTTGGTAAGCTCTATAGTGTCTACCAAATACAA 115640 30 100.0 36 .............................. TTTATTTGTGTAAACGGAATTAAACAAGAGATTTCG 115706 30 100.0 36 .............................. TAGTAGTTATTTATCCATCTGTAACGAATATTAATA 115772 30 100.0 36 .............................. TTCAGCATCCCCCTATCTGTCTTCAAATTTATATAT 115838 30 100.0 35 .............................. GTATTGAAAAAGGAATGGTATTAGACAAATGTTTA 115903 30 100.0 36 .............................. TCTTATCTATCTCCTTTTAAATTAACCTATATTTAC 115969 30 100.0 36 .............................. GAAAATGTTATCTATGGTGGTATGATTTTGAAATAT 116035 30 100.0 34 .............................. TGAAGATGTTGCAACTAAGGTTAAAGTACAAAGG 116099 30 100.0 36 .............................. TATTCTGAAAAATTGATTTAACCTCTTGTAACTTTT 116165 30 100.0 35 .............................. ACTACAGTAATTAATAATTTCACTTATAATAGTCC 116230 30 100.0 36 .............................. TTGATGGGAATAAATACTATGATGATGCAACATAAT 116296 30 100.0 36 .............................. TTTCTATTGCTTCTAATGCTATGTTATACCACATGC 116362 30 100.0 36 .............................. CAGTAACATCCATCCAAAACGGATTAGGACAATATA 116428 30 100.0 36 .............................. TGGTAACCTCCTGCACTTTTTCTTACTTTATACTAA 116494 30 100.0 35 .............................. GAGTTGCATCAAAGCTTATACCGCAATCCATATCT 116559 30 93.3 134 .........................G...A TATTTAGAGACTAAAATAAATAAATTTTTTATAAGTGTATATTATTTAGAACTTAGGCAATAATGTCTTGTGTAATGAAAATTTAGCTTTTGATATTTTCGCCTTTGAATAAATTTATCTCAAGTATAATTTAA G [116581] 116724 30 70.0 0 A..T....TC.G..A.AAT........... | ========== ====== ====== ====== ============================== ====================================================================================================================================== ================== 24 30 98.5 40 GTTGAACTATAACATAGGATGTATTTAAAT # Left flank : TGGAATATTAGTGGCGTTAAATGATAAATATAGAGTGAAATCTAACAGAGAAAGCGGCTATGGAAGATATGATATAATGATTATTCCAAAGGATATAGAAAAAAATGGTATAATAATTGAGTTTAAAAAAGTTAATAAAAGGAGAAAAGAAACTTTAAATACAGCAGCTGAAAATGCATTAGCTCAAATAAAAACTATGAATTATAAACAAGAGCTTATTGAACTTGGAGTAAAAAATGTAATAGAGCTTGGAATTGCTTTTGAAGGTAAAGATGTTCTAGTATTAACATAAAGTGTAATACTAACTTGAATTAACTAAGAAATTCACCAGCTGAAGCTAGAAATAAAGTGCCTTTAAAGCCTTGAAGTATAAGGCTTAAGGGTACTTTTTATATTGTGTTTTTAAAAATCAAAAAACGGCTGGTAAAATTTTAAGTAAGTCCTTTATTTTCAATGGATTAAGGGTTATAATGAAAAAGAATAATGGCTATTTTACAGTG # Right flank : TATATTATTTGTTAAACATTTAATGTGAACAATAACAAGAGTTGTGTAAAGAAAGTTATATAGTTAAATAATAAATCCTTAAATTCAATATTATTTGTAAAACAATTTAATAACTTTGAAATTTAATTATTATGATAAATGGAGGTGCTAGAAAATGAAAGGCTTTATAAGTAAAACTATATTTACAGCAGCAATATTAACTGGAGTATATATTTTATCTAATTCAAAAAACTTAATAAACTTAGGGGTGAATTTTAAAGAAAGCAAATAGGTGATTTTTATTACTTAGTTGCTTTTTTATTGTAAAATTGATGTTCTATTAATGTGAATGTGAAGAGATTTTTGAAATTCTACAAAAAATTTCAAAAATTATAGAGGTATTGTAATAAAAACGTAGAATAGTAATATATATGAAATTAATTGGTGCATTTAGAAACAAATATAGATATATAATATTGTAATCAAAGCTTAGGGTATTTAATTTTTCACTCTCAATTTTT # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.38, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 4 126331-128647 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNI010000007.1 Clostridium sp. P21 NODE_13_length_166271_cov_130.075862, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 126331 30 100.0 36 .............................. CCACCATAATAAAAAAGGTAACGCTTAAAACGCTAC 126397 30 100.0 36 .............................. TTTCAGAAAGCTTTTTGTTTTGTAAGTCGATAGTAT 126463 30 100.0 34 .............................. TATCCCTAGTAGTTTTTTTGAAGCTTACGTATAT 126527 30 100.0 35 .............................. GGTAATATTAAGATATCTTCTATATTTATCTTTCT 126592 30 100.0 35 .............................. CCAAATTTTCTTAAATATTCATTATAGCTTTCTTC 126657 30 100.0 34 .............................. CTTTGAGTGATTTCTGAGTGAGTAACTTTTACTA 126721 30 100.0 34 .............................. TGCGCTGTATAACTACTTGTTTTATCTTTATTAA 126785 30 100.0 36 .............................. TTGTATACCTCAGATACCCATATCCTGTGAATTCAT 126851 30 100.0 36 .............................. TGTTGTAAATCCTACAGATCCAGGGAGAAAAATTCC 126917 30 100.0 36 .............................. TCAGCATTCATATTTTTATATTCATAAAAATCCATG 126983 30 100.0 34 .............................. GCTATTTGCTCTTTAGACATTTTACCGATTTTCT 127047 30 100.0 36 .............................. AGTGATTCCTTTATTTTCTTAGCACTAGCCATATTT 127113 30 100.0 36 .............................. CCAGTTCTCATCCCTATAAGAACAGGTGAACTTGCT 127179 30 100.0 36 .............................. CTAACATTAGTAACGTTTAATTGAACTTTAGCACCT 127245 30 100.0 36 .............................. CTCATAATTGTACTCCTTTCTATTAATCTAAAGCTA 127311 30 100.0 36 .............................. ACTATCCTTATATACTCATAATTATTAGGATTAGTA 127377 30 100.0 36 .............................. TGTATAAAGCATATGGTCTTCTTTTTTAACAAAATA 127443 30 100.0 35 .............................. GGTATTAACTGTACCTCAAAGCTCTCTATCCTTTT 127508 30 100.0 36 .............................. GGTAAAGAATTAAGTGCAGACCTAATAGAAGAAAAA 127574 30 100.0 33 .............................. ATACATTTTTTAGTTAATACTCTCTAGGCTTTT 127637 30 100.0 36 .............................. TCTGATATTGGCTTGCTATATTTGTGTCTACATAAT 127703 30 100.0 36 .............................. ATATTAGGTAAACTAACTGCCAATATAATCATTCCT 127769 30 100.0 36 .............................. AGATTAGCCACAACCTTTACTATTCTAGGTTTTATA 127835 30 100.0 36 .............................. TATTTAAAAATTTTATTTGTTCTTCCTGAAAAACTT 127901 30 100.0 34 .............................. CAGTAACAACTTGATTTTTTAAGACCATCTATTT 127965 30 100.0 34 .............................. TAAACCAATAGATGGTCTACAACGTGCGATACTA 128029 30 96.7 34 ................G............. GAGACAGACTTTTTTAGTCTGCCTGAGATATTGC 128093 30 96.7 36 ................G............. GGCCATTTTAAGCTTGAAAGATAAGCAGCTCTATAA 128159 30 96.7 36 ................G............. GCGTTAGTTCAAGTTGAACAATCTGCATATGGTTCG 128225 30 96.7 36 ................G............. CCTCCATTCTAAAGCATGTCTATTATCTTTTGTGCT 128291 30 96.7 36 ................G............. ATCAATTTATCAACTCCTTATATAGTTTGTACACTC 128357 30 96.7 36 ................G............. TTTCCTGGACTGTTATGGAATGTACTTACAAGTGCA 128423 30 96.7 34 ................G............. TAGCCCTGCCCATAGGAGAAGATGTATCGAATTG 128487 30 96.7 36 ................G............. GTGAATCCTAATTGTTTAGCACTACCTCCTGTCCAA 128553 30 96.7 35 ................G............. TATATAGCTTTTACTGTACTTACCATCTGTGGTAT 128618 30 96.7 0 ........A..................... | ========== ====== ====== ====== ============================== ==================================== ================== 36 30 99.1 35 GTTGAACTTTAACATAAGATGTATTTAAAT # Left flank : TTGCACCATTTAGCCTTAAGGAGATGATGTGATATGGGAAAGATAGAAAATTGTAATTATGCTTTTGTTTTTTATGATATTAATGAAAAAAGGGTTCAAAGAGTTTTTAAGATTTGTAAAAAGTATTTTAAGCATCATCAAAAATCAGTGTTTAGAGGAAATATAACTCCTTCTAATTTAATAAAGCTAAGGGCGGAACTTAAAAAGGTTATTGATGAAAGTGAGGATTTTGTATCAATAATAAAATTAATGAATGAAAAAAGCTTTAGTGAAGAAACGTTAGGAGTAAATTTAGAAAATAGTGAAGCATTAATTCTTTAAATTTTACCAGCTAAAGTTAGAAGCAAAGTGCCTTTTAAGCCTTTAAATACAAGACTTAAAGGTACTTTTTTTATTGTAGTTTTGAAAATTAAAAAACGGCTGGTAAAATTTTAAGGAAATGCTTTATTTTCAATGGGTTAAGAGGTATAATAAAAAATAAGAATGGCTATTTTACAGTG # Right flank : TTAAATGCTATTGCTATAAATCAGCAGTAACATTTAGTTTTATGAATGTTTAAATTGCATTACTTGTATTAAAATAATTATTAACAAAGGAATTAGTTAAGTAAAAAAGCTTTCTGTAGATATAACTGATTTTAAGGAAATTGTAAATGATAATTACTATATTTGTGGTATTAAGAAACTGTTATTTTAAAAGAGGCTACTACATAACTAACTCAGTTTAATAATTTTTTACAATAGCTTCTTTACAAAGATTAGAAGTGCAACGAACAAACTTTGTGGTTGTACTTGACAGATGTGTTTAGCAGCTATATACTATCATCATGATGAATATGAAATTTAAAAATAGAAATAAAGTAAGTTATACTTTTTTGAGAATAGTATCAAAAATTTCCGAATTTGACAAGAAAACTCGATATTATGGGACGGATAAACCATTATATGAAGCTGAAATTCACATGATCAAGTCCATAAAAGAAAATGAGGGTATTCATGTGACAGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATAAGATGTATTTAAAT # Alternate repeat : GTTGAACTTTAACATAGGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //