Array 1 937181-934527 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXDF01000001.1 Dichotomicrobium thermohalophilum strain DSM 5002 Ga0170455_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 937180 29 100.0 32 ............................. GATGAACAAAACGCCAGCGACAAGATCAACAA 937119 29 100.0 32 ............................. ACCACAAGCACGACGGGGACGGGGGATATAAC 937058 29 100.0 32 ............................. GACGAAGCCGAGCGCCTGCTGATCCGTGACCT 936997 29 100.0 32 ............................. ATGAGCGGGTTCATCTGAATGTCACCGCTCCC 936936 29 100.0 32 ............................. TCGCCAACATTCGTGTTGGTGCCTTCAGCGGT 936875 29 100.0 32 ............................. CTGGACGCCCCGGAACGCCTCGGAGACATACT 936814 29 100.0 32 ............................. TCAAAGTCGGAAGCGGCCAAGCCGGAAAGTGA 936753 29 100.0 32 ............................. CTCCGGTGCGGTCCGGCACAACGCCGCCGTTA 936692 29 100.0 32 ............................. ACGACACGCGGCGGACGATCCGCGAGGTGCGC 936631 29 100.0 32 ............................. GACGTGAAGGCGGCCCGCGAGGCCGCCGCGGC 936570 29 100.0 32 ............................. GCCTGCATCGCGGGCGGCTTCTGGGCCGACAT 936509 29 100.0 32 ............................. TGCTTCCAGCTTCGCCAGTTTTTCGTCTAGGT 936448 29 100.0 33 ............................. AAGATCAGCGAGATGAATCTGGCCGAGCGCGTC 936386 29 100.0 32 ............................. GCGGCGGCGGTGCTGGTCCTCGCCGCCGAGGA 936325 29 100.0 32 ............................. ATGGATAGTCTGGATTGGTGGCTAGTTCTATT 936264 29 100.0 32 ............................. AAAACATGCTGGACCAGCTTCGGGAAGTGCTG 936203 29 100.0 32 ............................. GTACCGCCATTCCCCGCGTGTATGGACGCGCC 936142 29 100.0 32 ............................. GTGATTGGTCGCGTGGCGTGGTCGCGTCGCGG 936081 29 100.0 32 ............................. GCCAAACTCCCGCCAGTTGTGGTCACGCAATT 936020 29 100.0 32 ............................. ACCAAGCGCGCCATCGAAAAGATCAACCGGCT 935959 29 100.0 32 ............................. CGGACGCGCGACGCGCGTCCCCGAACGCCACA 935898 29 100.0 32 ............................. CGGGAAAAGCACGCTGGCAAAGAAGATAATCC 935837 29 100.0 32 ............................. CTCAAATCCAACACCTTGGCGCACATTGGACG 935776 29 100.0 32 ............................. ATGTACATATTCAGCGCATTTATTTAGGCGTC 935715 29 100.0 32 ............................. AAACGCCGCCATACCGATTGCGACGTTCCTAT 935654 29 100.0 32 ............................. CGCCATACGGCCAGCGCGACATGTTGGAGCGC 935593 29 100.0 32 ............................. CGCGCATCCGGCCGCGCGCGCAGATCATCCCG 935532 29 100.0 32 ............................. TCTCGTAATCATCGACTTTGTCCCACGTCATA 935471 29 100.0 32 ............................. AATACAATGCGGCGAAAGAATTGGGGCTTATC 935410 29 100.0 32 ............................. GCCGCACCTGGCTCCAGCGCAACGGCGTCCCG 935349 29 100.0 32 ............................. TTGACTCGCGGCGGAATATGGGAACCGGAAAC 935288 29 100.0 32 ............................. AGTGCATCGACGATTGCAGCGCGAGCGGCGAC 935227 29 100.0 32 ............................. CCTCGGGTCAACACTCGGAGCGCTGAGAGATC 935166 29 100.0 32 ............................. TTTTTGCGATGAGGGGGTTGACACGGGCCGTA 935105 29 100.0 32 ............................. CCCTACGCCGTGACGCAGACCGCCATCCCAGA 935044 29 96.6 32 ............................T CCGCGCTCGCTGATCAATGCGCCCGAGGGGAC 934983 29 100.0 32 ............................. AAATCACCCTCTCCCAAGCGGTTTGCAGGATA 934922 29 100.0 32 ............................. ATATTTGGCTTGGCACGCAGAAGGTTATGGTT 934861 29 100.0 32 ............................. ATCGCGAACGTTACCGCCGCGATCCGCTTGAA 934800 29 100.0 32 ............................. GTATCAGGACAGCCGCCGAAGCGACTGCCCAA 934739 29 100.0 32 ............................. AGAATTTGAGAATACGCGCCGCCACCGCCACC 934678 29 100.0 32 ............................. TTGCTCGGTGGCCGGCGGGCGGGTGTTCAGGT 934617 29 100.0 32 ............................. ACCTTTGTGGAGCTGGGCGAAACATCTCCGGC 934556 29 79.3 0 ...............C.A.....CC.GT. | C [934541] ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.5 32 GTGCTCCCCGCGCGAGCGGGGATGAACCG # Left flank : GCGACAGCTTCCGAAAGACGGGACTCCTGGCCAAGATAATCCCTCAGATCGAAGACGTTTTGTCGGCCGGCGACCTGCCGAAACCTGCGCCTCCGCCAGAAGCCGCCGAGCCGGCATTCTTCGACGCGGAGGAAGGGCCATGATGGTGATAGCCGTAACCAATGCGCCGCCACGCCTGCGCGGACGGCTGGCTGCCTGGCTGTTGGAGGTGCGGGCCGGCGTTTTCGTGGGGGACTATTCGGCGCGCACCCGCGAGCGCATCTGGGATCAGGTGGTGAACTACATCGAGGATGGTGACGCGGTAATGGTCTGGAAGGCGCCCACCGATCAGGGCTTTGACTTCGCCACTGTGGGGTCTAATCGCCGGATGCCAGTTGACTTTGACGGACTGAAATTGGTGAGCTTCTATCCGTCGGCGGAGTCGACCGATTCCGACGGCTGAAGCTGGTAAGCTCTTTGACTTGTGAAAAATCCTTGGGCATCAATGCTCTGCAGCAAGA # Right flank : GGCACAACAACCCAAACATCTCGACGATCGAACTGTATCTCTGGTGTATCTACGTAGAGCAGATAGAACCGCTGGAAAGATGTAACCCTTTGAGTTTATTGGCGACCCCGAGAGGACTTGAACCTCTGACCTAGTGATTAGAAGTCACTCGCTCTATCCAGCTGAGCTACGGGGCCGCAGGCGGGTACGCGCCCGTCAATGCGTCCAGGTGCCGATGCGGCCGTAACGGAAGTTATCCGCATAGGCCTTCTTGACGCGCTTGCGCGGTGGTTTCTCGCGCACGCGATACGGAATGCCGTGGCGCTTGGCGTAGGCGATCGCCTCGTCCTTGGTGTCGAAGGAGAGCCTGACCTGCGCGCGGGTGTCGCCGCTGCTCGTCCAGCCCATGAGCGGGTCAGTCTGGCGCTTTTCTGCGCGCTCGAACTTCAACACCCATTTGTCCAGCGCGTGACCGGACTGCATTGCGGTCTTGGCAGGCTTGTATATCCACGCGACCATCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //