Array 1 27877-25346 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTGK01000012.1 Corynebacterium jeikeium strain ATCC 43734 contig12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 27876 29 100.0 32 ............................. GCGACCACCGCGAACTCGCCGATGAGCTTGAG 27815 29 100.0 32 ............................. GAGCGTATTGTCTCGCGCGTTGACATATTGGG 27754 29 100.0 32 ............................. GCTATCGACGGCCTCACAGACAAGGTTAAGGG 27693 29 96.6 32 ............................T CGCCCTAATCTTCTCCTCCACCGAGCTTGTAG 27632 29 100.0 32 ............................. GCCACGGCTGCATGGGAGGGCATTAAGAATGC 27571 29 100.0 32 ............................. ACCACCGTGGCCTTAGAGGTGATGTAGGTGCA 27510 29 100.0 32 ............................. GGCAAGGGGTGGGTGGTGACGGCGGACGGTCG 27449 29 100.0 32 ............................. TGTATAGGGTTATCGCCCCTGCGCTGGGCGCG 27388 29 96.6 32 ............................T GGTCTTAAAGACCTTCGGCTTAACCTCACGCA 27327 29 100.0 32 ............................. TAGCGGCCTGCCTTGTCCTCGCGGGCTTGCTC 27266 29 96.6 32 ............................C GAGGCCGGGGTTATGGGGTGCGGTGAAGGTTG 27205 29 96.6 32 ............................A GTGCGGGATGAACTGCGCCGCATCCCGAAGGA 27144 29 100.0 32 ............................. GACGCGATCACCCGCAAGGAAGGCAAGAAGCT 27083 29 100.0 32 ............................. TCCACCCACCCCTTCTCCACCATCTCTTTAAT 27022 29 100.0 32 ............................. CAAACGATCCAAACCGGCATCGACGGGTTCCG 26961 29 100.0 32 ............................. TCCGCCCACCCCTTCTCCACCATCTCCTTAAT 26900 29 100.0 32 ............................. CAGCGTTACGGTGGCCCCGGTGCTGTGTGGCC 26839 29 100.0 32 ............................. TCTTCCGCGCCTGCTCCGCAAACGCCATCGAC 26778 29 100.0 32 ............................. GGCGATAAGGGTGACCCTGGTGGTGTGCGGGG 26717 29 100.0 32 ............................. GTATCTAGCCCGTCGCGCAACCCCTTGAAAGT 26656 29 100.0 32 ............................. GTCGACCGCTACGCCCCTAGTACCCTCGGCAG 26595 29 100.0 32 ............................. CCGATGTAGTAGTTCAGCCGTGTAGGTAGCCA 26534 29 100.0 32 ............................. GCATCCGTGGTCGATTGAGGTTTGGATGAGGT 26473 29 100.0 32 ............................. TTTTTCGGTGAAGGTGAAGGTTTTGGAGTTGG 26412 29 100.0 32 ............................. GCTAAAAGCTTTAAGGAGTCCATCGGCAAGAT 26351 29 96.6 32 ............................T GAGTGCTGCAACCCCATATCGCGTCGAAACAC 26290 29 100.0 32 ............................. GGCACGCCCGGTGACCGACTACGCCGCGAGAT 26229 29 100.0 32 ............................. ACTACTGACGCGCTTGGCGATGGTGACGAGAA 26168 29 96.6 32 ...T......................... TACCAGAAGGCTGTGGTTTCTGGGAATTCTGG 26107 29 96.6 32 ............................T GGAACGCAACCGGGATAAAAACCCGCCACGGT 26046 29 100.0 32 ............................. TACCAGAAGGCTGTGGCTTCTGGGAATTCTGG 25985 29 96.6 33 ............................A GGAGAAGGCGCTAGCGGAGGCGCGTAAGGCTCT 25923 29 96.6 32 ............................T GCGTACGGTGTGATTAACCCGGCGCTCCGGTC 25862 29 100.0 32 ............................. CCGATCGAGAAGTGCGGCAGCTCTTCGGCGGA 25801 29 96.6 32 ............................T CTTTCGATCTGCCATGTCATCACCTCCCTAGG 25740 29 100.0 32 ............................. CAACGCTCAGCACTTGATTGGACTCGTCGCGC 25679 29 100.0 32 ............................. GTGTTTGAGTGCGGCGGGGTGGCCAGTGTCAG 25618 29 100.0 32 ............................. GAGGGGAGCGCGGCGGCGAACGTGTTTAAGAC 25557 29 100.0 32 ............................. TTCGCGCTGTTCAGTGTCAGAGAGTGCCATGA 25496 29 100.0 32 ............................. TCGATCCGGTTGCCGTTATGTAGGTTCACACA 25435 29 100.0 32 ............................. TCCAGGTCCCAGTGGAAGAAGGCTTGTTCCTG 25374 29 93.1 0 .......................T....T | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.0 32 GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Left flank : TATTGATGCTGAGCTGGTGTTGTGGTCGGACTTGGAGGTCGTGGCTTCCAAACGCAATTGGTCAGACGATGGGCCAATCAGATGATGGTCTTGGTTGTATCTGCATGTCCTGCGGGTCTTCGCGGTGACCTCACAAGGTGGCTGTTGGAGATTTCTCCAGGTGTGTTCGTAGGGCGCCCCAGTGCCAGGGTGCGCGACCAGGTGTGGGAGCGAACATGCGACCTGGTGAATGATGGCCGAGCGATCATGGTGTTCCAGGCAGCAAACGAGCAGGGCTTTGATTTCAAGACTCACCGGCATAACTGGGTTCCAACTGATTTCGATGGGGTGAACTTGATTACGCGCCCCAACAACCGGGCAGCTTCGACGAGGCGGCGCGGATGGAGTAATGCGCGGAGGAGGTAAAGCGTCGGTGATCGTTCGCTAGTCCGGTAGGCGGTGGTGAAAACAAGCTGAAGTAGAATTGGCCCAACGGCTCAAAGAACCACAGCTCAGAGAGT # Right flank : CAGGGAGTGCTATCTTGACGCGATTTCCACGGATCACCAGCATTCACCGCTCCTGAAAGGCGGGACGACCTCCAAAATGAAGAAAGCTTTCTATTCAATGCTTAACAGCAAAGAAATTCAATAGAAAGAAACGAAACTAAATTGAAAAGATCGTGGTTACTGATCTTCTGATACTCTCACATAATCAGGACGATGTTCCTTTAGGAAACTCCGTAAGCATTCGCCTGGGTTACTGCCAGGTGAAAAGAGATCGAGGATCTTATCCAACATGTCAGGCGCGATAAACACACCACCTTCGACCGAGTAGTAGACCGCACTCTCGAGTGCATATTCGAATTCTCCCCCTAAGGCGGGAGTAAAGGCGTGGTCAATCCCTGCAGTGACGAACTGCTCTCCATAACGGGAAAGAAATTCTTCGAATACATCCATCGAGGGATCCGCACGCATCTTACGATCCTCTCCGCTTTACCGCACGGTAGCTAAAAACGTGATTGTAACTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //