Array 1 2681618-2684574 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKCS01000001.1 Chromobacterium sphagni strain IIBBL 37-2 Cmus_37-2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2681618 29 100.0 32 ............................. CGCTGCGGCTGGACTTCTCGCTTGATTGTGTA 2681679 29 100.0 32 ............................. GATTGACCATGAAATTCATCGCCGTAGTACTG 2681740 29 100.0 32 ............................. ATGGTGAGGAAATAGAATTACCTATCACACGC 2681801 29 100.0 32 ............................. GCTTAACATGTCGAAAAAATCGCTTGATTACC 2681862 29 100.0 32 ............................. CCAGGGGCGGGAACGCCCAGCCAAGGCCAAGC 2681923 29 100.0 32 ............................. TCATTCGACGTGGGCGCGTTGGGGTCGCCAGT 2681984 29 100.0 32 ............................. GGGTGGCAAAAGCCACCCCAGCGAGAGCAGTT 2682045 29 100.0 32 ............................. GGAGGTAAACCAAAACGCGCCAAAATCAAATT 2682106 29 100.0 32 ............................. ACTCTTCAGCCGGTGGCAAACCCACTTCTTCC 2682167 29 100.0 32 ............................. ACATTCGATTCCATGCTATCCCCTCCTCTGGC 2682228 29 100.0 32 ............................. GACGACATGTCGTCAAAGTTGTCCGGATCCAT 2682289 29 100.0 32 ............................. ATTTTACATAATATAGACTTGTCATGGTATTT 2682350 29 100.0 32 ............................. GCCTGACCCCATGTCCGTCTTTGTCGATTGGA 2682411 29 100.0 32 ............................. AGGTGGCCTCCTGGGCGCAAGCGAATCCGCAG 2682472 29 100.0 32 ............................. GCTTTGAGCGGCTATAGCCGCCAGGTGAAAAA 2682533 29 100.0 32 ............................. TCTGTGGCTATTCTCTCATTGCATGGGTTTGA 2682594 29 100.0 32 ............................. CATTAATAGGCATAGGTTATCCAATCACAGGC 2682655 29 100.0 32 ............................. CGCCTGGACCGCATCAATTGGCCATTCATCAG 2682716 29 100.0 32 ............................. TCTTGATTCGCTCCGGCAGCGTTCAGGCTATT 2682777 29 100.0 32 ............................. TACCGCGAGACGATTGCCGGCCTCCCGGTGGT 2682838 29 100.0 32 ............................. GTTGTCACGAATTCTAGAATTTTGGTTGACTC 2682899 29 100.0 32 ............................. GACGCTACATGACCAAAGCCCAAATCATCAAA 2682960 29 100.0 32 ............................. CCGTCCCGGCCCGGCCCCCTGCGGAGCAGGGG 2683021 29 100.0 32 ............................. CACTGGTAGCGTACAACGAAGGCGCAGGCTCC 2683082 29 100.0 32 ............................. CTTGCTTTGTTCCGATCGTTGTGGAGGTTCGG 2683143 29 100.0 32 ............................. ACATCATCCTCGGTGTGCAGGTAGGCAATCAG 2683204 29 100.0 32 ............................. CGCCGCAATGGCTATGTGGAGTGGAAGCTCAA 2683265 29 100.0 32 ............................. CAAAAATCCAATCATTGCCCACTCCTTATGAC 2683326 29 100.0 32 ............................. GCTGCAAGTTTGGCCGAGCGGCCAAGGCGGCA 2683387 29 100.0 32 ............................. CAGTGGCAAGAGAGTAAAGAGCGCGACCGCCT 2683448 29 100.0 32 ............................. CTGGCTGATCGCGCGTATTGCGCAGTTGTGCC 2683509 29 100.0 32 ............................. GCTGCCGCCTAACAGCGTATCCGGACCCCGGC 2683570 29 100.0 32 ............................. GGCCACGTGAAGACCGGGAAGCGCGGCAGCAT 2683631 29 100.0 32 ............................. CGTTTCAATCAAATTGTCCGCCGTCTTAAAAA 2683692 29 100.0 32 ............................. GACGAGGAGCTGGCGGCCAGGGAAGACGAGGC 2683753 29 100.0 32 ............................. AGCCGGACGGCGAAGTGCTGCAGGTGGCGAGT 2683814 29 100.0 32 ............................. GTCATCAATCACATCTAGCGCTTGCCGATGGC 2683875 29 100.0 32 ............................. AGCGATAGCTGACGTTCGTAACCGGGCGGCCC 2683936 29 100.0 32 ............................. TACGCCGTAATGCCGGCGTGACCCATTATTGG 2683997 29 100.0 32 ............................. GACGACCTGGAGACGCTGTTTCTCGCCGACCA 2684058 29 100.0 32 ............................. GCAGTCATTGATCAGGAGCTGGCGAATGTAGA 2684119 29 100.0 32 ............................. ATTCAGCGTGACCGGCGTCGTCTTGACCACGT 2684180 29 100.0 32 ............................. TCCAGATTGTTAATCCAAAAACTATTGCTAAT 2684241 29 100.0 32 ............................. TAGTAACCCTAGTGACGTACCAGGGCAATAAC 2684302 29 100.0 32 ............................. CGCGGCAGCATGACGCCCTGGGACATCCTTCG 2684363 29 100.0 32 ............................. GGGGGGAGGGCGCCTTTCCAGTTGCTGGCGGA 2684424 29 100.0 32 ............................. AAGCTTTTATGCTCCGGCAACAGCTTGCAGTC 2684485 29 100.0 32 ............................. CCATTGACCATAGTCGACGTGCCCAGGACGGC 2684546 29 75.9 0 .....TG.....A.A.C.......GG... | ========== ====== ====== ====== ============================= ================================ ================== 49 29 99.5 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : ACCTGCTGGCGCAATGGCTGTACAACGTGCCGCCGCTGTTCCACCTGTCCGCCGCCAGCCTCAAGGCGCGGCTGCCGCAGCTGCAATGCGCCGACCAGGCCTTCAGCCCCATCCACCGGCAACTGGCTACCCAGGCGCTTACCGGCTTCGCCTGGCTGAATGCCGAGCGCACGGTGCAGCAAACCCGCTTCGCCGACGGCAGCCGCCTCACCGCCAATTTCGGTTCGACGGCGGCGGGCGATGGCGGCCAGGCGCTGCCGCCGCAAAGCCTGCGGGTGGAGTTGGCCGACCAGCCGTCCAGGCTGCTGCGGGTGGCGGATTGCGCCGGCACATAAGCTGCGGCGATAATGCCGATGTCGTTTTTCGGCCGCGGGGGCATGCTCCCCGCGGCCGGCGGCTGGCTGGCGTGATGTGATTTGGATGGCGGTTTTTGAGTCGGGAAAATCGGTGGAATTCCGGGTGTGGTTTTTATCTTTAAAAATCAGTAGCTTGAAAATGGT # Right flank : GGCCAGCAGTGGAACGGACAGCGTAACGACCCCGTGCTCCCCGGGTCATCAGAAATGTGTCGGTCCGCCATCGCGGGTCTTGTGGTTGATGGCGAGGGGAAGGCTGAGCTTGTATAAGGGTGGCAAAATGCCGATAATTGATGTGCAGATTGCGCCAATTGGAGGTTGTCATGCCCACACGCACCGCATTCAGGCCGGACCCCGCCATCATCCGCCGCGCAACGGTCAGGGAGGGGGAGCGCCGTTCCCGCCAATCCGATCTGTTGGGCCAGCCTGTCTGCACCGATTACGACATCGTGAAGGTGGTGGCCAATGGTTTGGACCCAGGCGTGATCACCCGCTTGACCAACGAGGGGTTGACCCGGCGCGAGCTGGAGTTTGTCATTCCCCCGCGCACGCTTACCCACCGTATCAAGAATGGCGAGCGCCTGAGCACCGACGAGTCCGAGCGCAGCGTCCGGCTGGTCAATCTGCTGTTGCAGGCCGAGCAGCTGCTGGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2695010-2699065 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKCS01000001.1 Chromobacterium sphagni strain IIBBL 37-2 Cmus_37-2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2695010 29 100.0 32 ............................. CCCAGCGACGAGCGCGGCGTTCGGGTGGATGA 2695071 29 100.0 32 ............................. GTTTGCCGTCTGTGCTGGCGGACTCCATTAGT 2695132 29 100.0 32 ............................. AATACATTCCTGCCGTATTACGACGAAAAGAA 2695193 29 100.0 32 ............................. CATTGATGATTTAGGCACTGTGTTTCATGTCA 2695254 29 100.0 32 ............................. ACATTATTGCCGTAGGTGTCAATGCCTCTCAG 2695315 29 100.0 32 ............................. CTCATGACAACAAAGCTGCCGCACGGCTAAAA 2695376 29 100.0 32 ............................. TCGCATTACTCAGCCCAACCCGGAGGAAGGCG 2695437 29 100.0 32 ............................. ACGCCGGAAAGGCGGAACCTTACGCGCCAGGT 2695498 29 100.0 32 ............................. TCCCCCGACTCATGCCCTCAGGGTTCGGTCGC 2695559 29 100.0 32 ............................. GGGTAGCGGGGCTAGGCCGCGTTTTTGGCGGC 2695620 29 100.0 32 ............................. AGTCACAGCCGGCCAGTCACAAAAACGGCGCG 2695681 29 100.0 32 ............................. TGCGTTGGACATGGGCCAGGGCTCGACGTGGC 2695742 29 100.0 32 ............................. CGGCTGGACCGCATCAATTGGCCATTCATCAG 2695803 29 100.0 32 ............................. TGTCTGGGCCCGTGCCGCTGACGTCGCATTCT 2695864 29 100.0 32 ............................. CTGATTGGATTGGTATTGGCGTCGGTGCCGGC 2695925 29 100.0 32 ............................. GCAACAGGTGGTAAATTGGATGGGACTGTTTT 2695986 29 100.0 32 ............................. CCGGTGATTGTCGGGGATCGGGTCTATGCCGA 2696047 29 100.0 32 ............................. GGTGGTGAAAAGAGTGAATGAGGCGAGCTTAT 2696108 29 100.0 32 ............................. CCTGAAATGCACCAGGGCGGCGATTAGTCAGC 2696169 29 100.0 32 ............................. CCGGCAAGGTCATACTTTTCAGTGCATGAAAC 2696230 29 100.0 32 ............................. CCTGTTTTTCCAGCCGGCACCCGACCCTAAGA 2696291 29 100.0 32 ............................. CTTTGCCGATCGCGGATGTTCGCAGATGATCG 2696352 29 100.0 32 ............................. GCATCGAAGCGTCAATTTTCTTTCCCTGGAAA 2696413 29 100.0 32 ............................. TATGGGCGGCTAGATTGGTCGTTTTTGCCGCG 2696474 29 100.0 32 ............................. GCCGTCGCCATCGTCAGGTCTGCTCGTGCTTA 2696535 29 100.0 32 ............................. TTCGACAGCGTCTGCGAAAACGATTGTTGGTT 2696596 29 100.0 32 ............................. CTGCAAATTTTGCGGAGAGACCAAAACCGAAG 2696657 29 100.0 32 ............................. GACTTTTTTCAACTTTTTGGATTTGCACTGAC 2696718 29 100.0 32 ............................. CGCAACTGGCCGCCATGGCTGAGCTGATGCAG 2696779 29 100.0 32 ............................. CGGCCTGGCTCAGCGGCCCACCCCGGATCGTG 2696840 29 100.0 32 ............................. CCTGGGCTGAATGCCAGAGGTATAGGGCGGAA 2696901 29 100.0 32 ............................. AAGCGGCTTCCCCGCAAAAATACCGGCATCAG 2696962 29 100.0 32 ............................. TTGCCCTCGTATCCTTCAAAATCCGCTTTTGC 2697023 29 100.0 32 ............................. AGTGAATGAGGCGAGTTTATTTTCTTCTACTT 2697084 29 100.0 32 ............................. CCCCAATTGGAGCCATCCACGTTGATTTTCCA 2697145 29 100.0 32 ............................. TCCTCAGTAGGGTCAAGGGCCGGGACTGGCCG 2697206 29 100.0 32 ............................. TCCACGCGTCCATTGCATGCCGCCAGTATCTC 2697267 29 100.0 33 ............................. GACACCTGGTACGCAGTGATCGACGCGGCGCAA 2697329 29 100.0 32 ............................. GGCGAGGATATGCCGCGAAAGCCACTTGACAC 2697390 29 100.0 32 ............................. TGAATTTACAATTGCTCATGCCATATCCTGGT 2697451 29 100.0 32 ............................. TCGGCCTGATGACTGAAGTTCAGGCTGCCCAG 2697512 29 100.0 32 ............................. ATATGGTCGATGTCTTCGGCGAGCTTGGCGGT 2697573 29 100.0 32 ............................. CGCAGAAACGATAACAGGCTCAAACGTACCAG 2697634 29 100.0 32 ............................. GAGAGGGCAAAGCCTGAGACGCCGGAGAAGAC 2697695 29 100.0 32 ............................. GGGCATGCAGGTCAGCACGCGGTCTGTGTTCG 2697756 29 100.0 32 ............................. GAAAAATCCAAACATTCAATTAGACAACGTCG 2697817 29 100.0 32 ............................. CGCCTTGCCCGCGAACTAGATATCCCGGTCGC 2697878 29 93.1 32 ..C...T...................... CGGTACTGTGTGCTGACGGGCAGCTATTCCTG 2697939 29 100.0 32 ............................. AACGCCGCGCCCATGGCGGTCACGTCTTCACC 2698000 29 100.0 32 ............................. AAACAGTATGTCATTCGAACAAGCGTGGAAAA 2698061 29 100.0 32 ............................. GAACCACACCTATGAGCATGAGCTGGAGAGAC 2698122 29 100.0 32 ............................. ACTGCCGGTTGCCAAGCGCGACTTTGGCCAGA 2698183 29 100.0 32 ............................. TTTTCTCAGGGACTTATTTTTTATTGCGTATT 2698244 29 100.0 32 ............................. CCTTGGCGAATTACACCACAGGACTAGCGGAC 2698305 29 100.0 32 ............................. AACAATTGCGCGCAGAATTGGATAAGTCACGT 2698366 29 100.0 32 ............................. AACGTCGATGGTCGCGCCGCGTCCGGCCATGA 2698427 29 100.0 32 ............................. CCTTGGCGAATTACACCACAGGACTAGCGGAC 2698488 29 100.0 32 ............................. AACAATTGCGCGCAGAATTGGATAAGTCACGT 2698549 29 100.0 32 ............................. AACGTCGATGGTCGCGCCGCGTCCGGCCATGA 2698610 29 100.0 32 ............................. TCACCTATCAATCCATCGTCCGCGATTTTGTG 2698671 29 100.0 32 ............................. ACATGGTCGGGGAGTTGCTGGAAGTGGCCAGC 2698732 29 100.0 32 ............................. CCAGAGTGCTGGCAGGACTACACCGCGCCGAT 2698793 29 100.0 32 ............................. CCAGAGTGCTGGCAGGACTACACCGCGCCGAT 2698854 29 100.0 32 ............................. CGGGTTACCTCAATAATCGCGTCTGCCGCGCC 2698915 29 100.0 32 ............................. TCGGTCCACCCGATGGGCCATCCCATTAACCA 2698976 29 100.0 32 ............................. TTCTTGTGGAGGTCGTCCTGGTAGCCGTCGTA 2699037 29 93.1 0 .........................G.A. | ========== ====== ====== ====== ============================= ================================= ================== 67 29 99.8 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACATCGAAACCCTGCTGGATGCCGGCGGCTTGGACAAGCCGGAGGCGGAGGGCGTGGTGGGGGCGGCGTTTCCGGAAGACGAGGGGCTGGGCGATGCTGGTCATCGTACTTGAAAACGCGCCGCCCAGGCTACGCGGCCGGCTGGCGATCTGGCTGCTGGAAATCCGCGCTGGCGTCTACATCGGTACCTACAACCGCAAGATCCGCGACTACCTGTGGCAGCAGGTAGAGGAGGGGCTGGAGGACGGCAACGCGGTGATGGCCTGGCAGGCGGCCACCGAGGCCGGTTTCGACTTCGTCACCCTAGGCGCCAACCGCCGCATGCCGGTGGAGTTCGACGGCGCCAAACTGGTGTCCTTCCTGCCTCCGCCTGCGTCGCAGGAACCGGCGGCGGAGTAGTCCGCTTTTCACCCTGCCGAAGGCTGGTTTGGCTCTTTAAAAATCGGTAGATTTTATCGCGCTATTTTTGTTTTTAAAAATCAATTGCTTGAGATTGGT # Right flank : GGCTTCGGAACAGTTCGCGCTGCCCTCTCTCGCTAACCCCCTTTCCACCAGGGGAGAGAGGCATGTCCAAGCGGTTTTGCTGGGCGGCGCCAGCAGCGCGCGGTCTTGCTGGCGGTTTGCTGGCGCCGTGGGCCGGCCTTATTTGTCGGCGTACAGCGTGCCGGCCTTGGCCCAGTTTTCGCGCGATACTTCGTTGATCACGATGTCCACGCTTTCCGGCGGGCAGCCCAGGGTTTCCACCATGACGCGGGTGGCTTCGCTCGCGAAGGCGCGTTTTTGTTCCGGGGTGCGGCCGGGTTGCAGTTCCAGGTGCAGGATGGGCATGACAATTCTCCAGTGGGCGGCGCCGCGAAGCGGGTGCCGATGAGGCCAGTATCATCCAGCGCGCGCCGCCGATAAATATGCCATGATTTGATACATTCCAAACCTATGGGTTGTTAATCATGGACAAGCTGGCCAGCATGGCGATGTTTGTGCGGGTGGTGGAAAGCGGCAGCTTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //