Array 1 452784-445222 **** Predicted by CRISPRDetect 2.4 *** >NZ_OCVX01000005.1 Mycobacterium simulans strain FI-09026, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================================================================================================================================================== ================== 452783 28 100.0 33 ............................ GGGCGGGAAATCGAGCAAGGAAATCAGTAGCGC 452722 28 100.0 33 ............................ GCCAGGGACTTGCTCATCAAGGCGATCGATGAG 452661 28 100.0 33 ............................ GTTGGGCGAGGCCTTGGCCGCGCACAATATCGG 452600 28 100.0 33 ............................ GCACTTCCGGGAAAAATACCCGCATGTTGACCC 452539 28 100.0 33 ............................ GAAGCGAGAGGCGCCGCCGGTGTCGCCGTATAG 452478 28 100.0 33 ............................ GCACATCACTGAAAACCCCGCCGCCGGCATGGT 452417 28 100.0 33 ............................ GCTTGGCTTTCATCGATGGCCTCTCTTGTGGTG 452356 28 100.0 33 ............................ GTCGGGCGAACTCGCGGGCGATTCGCAGGCGGT 452295 28 100.0 33 ............................ GCCATGACCGCAGCCGCGGTCGGCGAGCTGGTC 452234 28 100.0 33 ............................ GCCACGTCGATCTGGCATGCCGGGGACGCCGAG 452173 28 100.0 33 ............................ AGCGGCTCACCAGCGTTCCGTACCGCATCCAGG 452112 28 100.0 33 ............................ GCCCAGGCGGCCGAGTTACAGGATGCCGCACGC 452051 28 100.0 33 ............................ GGTGATGGCGAACAGAGTCGGGCAGATCCACCT 451990 28 100.0 33 ............................ GTTCCTGAGCGAGCTCATACCGGAGCTTCTCGG 451929 28 100.0 33 ............................ GGCGATCATGCTGCCGCGCAGTAGTGGTGTGAC 451868 28 100.0 33 ............................ GGTGGTATTTCGGTCGGCAGACGGTGGTTTCGC 451807 28 100.0 33 ............................ GCGTCCGGCAAGCACTGGACACTACTACTCGGC 451746 28 100.0 33 ............................ GGCGCAGACCCGGCGACGTGCGCACCGGAGTAC 451685 28 100.0 33 ............................ CGGAATACCCTTAGCGGTCAGGCGTTTCGTCGT 451624 28 100.0 32 ............................ GGTGATCTCGGGGTCTCGGTAGATGGTGATGC 451564 28 100.0 33 ............................ GGCCAGTCTCAAGTACTGTCATGCACGGGTTGC 451503 28 100.0 33 ............................ GACGAACCGCAGCCGCAGCAACCACAGCAGCCA 451442 28 100.0 33 ............................ GTGCAATGCGTGCGGGAGCTACGACGTGGCCGC 451381 28 100.0 33 ............................ GCCGGATCCCCTGACCCATCTCAGGGTCCGTTG 451320 28 100.0 33 ............................ GCGATTGGAGAGCCAAATCTCATCCTGCCGGGA 451259 28 100.0 33 ............................ GTCTTGCAGAAATCCATCAACATAAGAATGTAT 451198 28 100.0 33 ............................ GACGGAGACTAATACTGATTTAACTCACCTTGA 451137 28 100.0 33 ............................ GGATTGCCAATGAAGGCAGGGGATTTCCCGACG 451076 28 100.0 33 ............................ GGTTGCGGGCGCGGGCGACGACATGGGGATCGG 451015 28 100.0 33 ............................ GATGTCGCCGGCGTCGGCGAAGGTGTTTATCCG 450954 28 100.0 33 ............................ GACCAGATCGGCGGTGGAGTCGATGAAGTCGTC 450893 28 100.0 33 ............................ GGGAACGGGGCGAGCAGATTCGACGATTTCGTC 450832 28 100.0 33 ............................ GTTGAGCAACAACCCACGAGAGGCCATGGTGCC 450771 28 100.0 33 ............................ GTCGTCACTATTGAGAAGAGCGCGCATCCGGGC 450710 28 100.0 33 ............................ GTTCAACGTGCTACCCTGCTGATGAACCGCTTT 450649 28 100.0 33 ............................ GTCCACGCCGTTGACCAAATATTGCCGGGCCAT 450588 28 100.0 33 ............................ GGTCATGCAAATCCCCGCAACAGCCTGTATCCG 450527 28 100.0 33 ............................ GCGCGGGTAACCGCTGGTATGACACAAGAGGAG 450466 28 100.0 33 ............................ GAGCGACGAAATTCGGGCCACGCGCCTCAAGCC 450405 28 100.0 34 ............................ AGTCGTCAGCGTGGATAGGCACGAAACCTTCCGC 450343 28 100.0 33 ............................ CGCCTCAACAGGGTCTGTGGCGTGCCGTAGCCT 450282 28 100.0 33 ............................ GCACCGTCGCGGTCACGGGCGTGGCCCGGTGTC 450221 28 100.0 33 ............................ GCTGTCGCGGCAGGTGCTCGACGAGTTCGTGGG 450160 28 100.0 33 ............................ GTGAGATTGATCGGCAGCATTACCGCCGCATGG 450099 28 100.0 33 ............................ GCCGCGCAACACCAACAGATACTCGACGAAAAC 450038 28 100.0 33 ............................ GGGTGTCTACGGGTTCAGCCGCGATGTCACTGA 449977 28 100.0 33 ............................ GGATGGCACCGTCGCCGATAAGCCCAGCGCGAC 449916 28 100.0 33 ............................ GCACTGCACATCTAGCACCGACACCTGCTCCCG 449855 28 100.0 33 ............................ GCCGGTGAGGTACCGCCGGCCCAATGGGCGACG 449794 28 100.0 33 ............................ GCTCGAAGTGACGCTTGAGGCCAGGGACTTGCT 449733 28 100.0 33 ............................ GAGTGGGTGGCCCGCGCCCGAGGTGTGAGCCCG 449672 28 100.0 33 ............................ GCATTTGGTGGAACGCATCATGCCAGTTCGTCC 449611 28 100.0 33 ............................ GTTTGGATTTCGGCCATGTACTTCAGTCCGGCC 449550 28 100.0 33 ............................ GATGGCCATGGTTGTTCACGAGCACCCCGACGC 449489 28 100.0 33 ............................ GTCGCCCGACCCGAACTCGCCGACGTGGGGAGG 449428 28 100.0 33 ............................ GGATGCGATCCGTGAGGGGATGATCACCCGCAA 449367 28 100.0 33 ............................ GTCGCCCGACCCGAACTCGCCGACGTGGGGAGG 449306 28 100.0 33 ............................ GGATGCGATCCGTGAGGGGATGATCACCCGCAA 449245 28 100.0 33 ............................ GTCGCCCGACCCGAACTCGCCGACGTGGGGAGG 449184 28 100.0 33 ............................ GGATGCGATCCGTGAGGGGATGATCACCCGCAA 449123 28 100.0 33 ............................ GCAGGTCACCGTGGCCAGGCCCAGCTGCGTCCA 449062 28 100.0 33 ............................ GTGATCAGGACGCTGCCCCCGACGATCTCAGCC 449001 28 100.0 33 ............................ GTTCGCCCCCTGGCGCACCCGCAACCAGCCACC 448940 28 100.0 33 ............................ GGTGTCCATGGTGGTGCTGGTCTGGGTCACAGC 448879 28 100.0 33 ............................ CGGGTAAGTCAAGGGCCAGGGCCAGGCAATCTC 448818 28 100.0 33 ............................ GGATCAAGCCCAAGGCTTGTGCTGCTCAGTTGC 448757 28 100.0 33 ............................ GTGCTACAGAGCGTCGTTCAGATGATGGAGAAG 448696 28 100.0 33 ............................ GCGTTTCTGTGGATGCTGGTCGCGCTGCCCTAC 448635 28 100.0 33 ............................ GCTCGTATATCCAATCGGTTTCGACGCTCACGC 448574 28 100.0 33 ............................ GGCCTTCCCTGCCAGCAAGAAGTTCAACCTGAG 448513 28 100.0 33 ............................ GAGGTCGTCGTAAAGCATCGCCAGCAGATCCTC 448452 28 100.0 33 ............................ GTCAAATCAATCTCGATTGCGGAGACCTGAGAC 448391 28 100.0 33 ............................ GGCTTGCGGGTCGCCCTCGAATCCTGTCCATGC 448330 28 100.0 33 ............................ GCCGGGATGGTCGCGCAGGTATCGGATGACGAA 448269 28 100.0 33 ............................ GCTAGTGCTTCTAGTCAACCTTGGCACTGGACC 448208 28 100.0 33 ............................ GCGAGCTACTGGGCCTGGAATGGGACCGTGTAC 448147 28 100.0 33 ............................ GTCGCCCAGCCGGGCCGCTGCCTCGACGTACAC 448086 28 100.0 33 ............................ GAACCCACTCGTATCTGGCGATGGCGTTGTCGA 448025 28 100.0 33 ............................ GTACCGCCGACACTGGTGATCACCCCGTCTTCG 447964 28 100.0 33 ............................ GCTTCGCCCAGTCAATGTCGTTGCCCTCTTGAT 447903 28 100.0 33 ............................ GTTGTCGATCAGCCCGGCTATCGGCGTGAACGT 447842 28 100.0 33 ............................ GTAATTGGGCAGGACTCGACAGCCATCCGGCTA 447781 28 100.0 33 ............................ GGTCATGGGTATCTCACGCACGCAACGCAATGC 447720 28 100.0 33 ............................ GTGGTTACGTCTCACCCGTTGGCGGTGCGCATG 447659 28 100.0 33 ............................ GACATGACCACCCGCAAAGACGAGTACGCCGAG 447598 28 100.0 33 ............................ TGAACAGATCATCAAGCTCAGCCGCCAGCATGT 447537 28 100.0 33 ............................ GCTCTCCAACATCCTGGACACGATGGCCGATGG 447476 28 100.0 33 ............................ GTCATTCGTTACCTCGACGATAGGGCGCCCGTG 447415 28 100.0 33 ............................ GACACCCGCAACGCCGAGCGGTCACGGCCAGCA 447354 28 100.0 33 ............................ GACGACGCCAAAAGCGTGGTCCTGTACTTCCTT 447293 28 100.0 33 ............................ GTAAAGTTCGGTGGCTTGAGTTTCCACAAGTGC 447232 28 100.0 33 ............................ GGAGCACGTGTGGGTGTGGAGAAGGTAGCCGAG 447171 28 100.0 33 ............................ GGGGTGGGAAGCCTTAGAGCGCGTGACTATGGC 447110 28 100.0 33 ............................ GATGTTCGTAGCGATTTCGACTACGTAACCGAA 447049 28 100.0 33 ............................ GGAAATCACGCAATGACGGCAATCACCGAGCGC 446988 28 100.0 33 ............................ GAGCCTCGCGCGTTCGCGGTGAATTTCGAGAGG 446927 28 100.0 33 ............................ GTATCAGCGCTAACCCGCGATGGCATACCGGTG 446866 28 100.0 33 ............................ GCTTTATTGGGTCGAGCCGACCTGGATGGACGA 446805 28 100.0 33 ............................ GCGTGGTGGCGAGGTTGTCGTGTCCCGCCATGG 446744 28 100.0 33 ............................ GCGCCCGTCGTTGAAGACGACCGTGGTGATTGA 446683 28 100.0 34 ............................ TGCCGTTGAGGAATTCCGGGCAATGTCGTTGACC 446621 28 100.0 33 ............................ GTTCGCGGAGAAGGTCGCCGCGCGCACGCCCGA 446560 28 100.0 33 ............................ GGCCATCGTCCAGCTCGCGACACCGCACCCGGC 446499 28 100.0 33 ............................ GTCGTAGGGAGGGGCTTTCTCTTGCGCAATGAG 446438 28 100.0 33 ............................ TGCTGGAACACTCTCCTAAGAAGGTACGAAATG 446377 28 100.0 33 ............................ GTTCACCAAAAAGGTTCCCGAATTCTTCGGCGG 446316 28 100.0 33 ............................ GCGGTCCATCATTTCGGCGCGGTTCTCGAGCGC 446255 28 100.0 33 ............................ TGGTGGGAAGACGTCAAGGACAACTCGTTGACG 446194 28 100.0 33 ............................ GCAACCTGCAAGGCGCATGCAAAAACTGCAACG 446133 28 100.0 33 ............................ GGTCCCGTACCGCGGGCGCCAATCCCCGAGTCC 446072 28 100.0 33 ............................ GATGTCCCGGGACCGGGCGGAGGAATTGCGTGC 446011 28 100.0 33 ............................ GTGTTCGTCGAGCCCGTAGACCCATGGGTGTAG 445950 28 100.0 33 ............................ GCTCATCGAGTAACTGCCGGCCGTAGCGAGAAA 445889 28 100.0 33 ............................ GTTGATTGAATTGTTCCATTCCCGTTATATTTA 445828 28 100.0 47 ............................ CGCCCGGATGATCGGGCGCCGGCTGTTCGTTCGTTTTCAATGGACAC 445753 28 92.9 33 ..G...........C............. GGCCCAACCCGTGGTGTTGATATCCCACCGGTA 445692 28 89.3 34 ..G..................G.....G GTACTTCGAGAAGATCGAGTGGATCCCCCTCGGA 445630 28 85.7 33 .CG.........G..............T GATCAGGTGGCCGTTGTGCACAAGGATCATGGT 445569 28 85.7 33 ..GG..........G......G...... CAAGGTCCGCGCCGCTGGGCCTAATGGCACGTC A,G,T [445546,445555,445561] 445505 28 75.0 166 ..G..A.T......C.....AT.....T AGGTGTCGGCTCCGGTCGAAAAGTGAGCAGGTGATTCCGCCCTAGAAACCACCTTGCCGCGCCGGGGTCAGTTTTCAGGTGCCGCCGACATAGAGTAGGCAGACGCCTCGCGGATGCAACATCAGTCTTTGTCGATCCGCCCATTACTATCAACTCAGCAGCAAAG G [445493] 445310 28 82.1 33 A..C........C.A.A........... TGGCCCGTCGAAACGGACGCTGAAACAGCGGCC 445249 28 82.1 0 A.G..................G...C.A | ========== ====== ====== ====== ============================ ====================================================================================================================================================================== ================== 122 28 99.1 34 GTTTTCCCCGCGAATGCGGGGATGATCC # Left flank : TTTTGACCGTTGTCGTTCTCACCGCCGTTCCCACCGGCTTGCGCGGCCACCTGACCCGGTGGCTCCTCGAGATCAGTCCGGGCGTCTTTGTGGGCCACATATCGGCTCGAGTTAGAGAGCTGATGTGGCAGCGCGTTGTCGAATATGTGAACGACGGTCGCGCCTTGATGGTGTACACCGCGCGCAACGAACAACGGCTCGCGTTCGCGGTTCACGGCCACGACTGGGAACCCGTAGACCACGAAGGTGTTTCCTTGATGCGAAGAAAGACCGTGCCGGACTACGTGCCGGTCGCGCGACCCAGACAAAAAGACACCCGACCGTCCTCGGGTCACGCGAGGAGCCAAGCCGGCGGAGTAGGTTCGGAGACGATTTGGAAGCGACGGGAGGCGAGAAGGAGGTTCAAGAAACCAAAGCAATGAAGGCAACTTCATCACCCCGCAACGCAAGAACCGATTGAAATTTGGGGGCTGGGCACGCGACTAGCCTGGTCAGCAAGG # Right flank : GGCGTCCTGTCTTTATTGTGTGCGACCGAAAGTGTGCCTCTTGCTGAGCGCGGCAAGAATTCGTGATGACAAATCTGGTTCCAAGCAACGCGGCCGCGGCACTCGCTGACCTGTCCGGCGACTCCGATAACCTGCCAAGGTGAGCTCACCCGACGTGTTGCGCGAGTGGCAGGAGCTGGCCGAGGAGGTCCGCGAACACCAATTCCGTTACTACGTGCGCGACGCGCCGATCATCACCGACGCGGAATTCGACCAGCTGTTGCGCAGGCTCGAAGCGCTCGAGGAGCAGCATCCTGAGCTACGCACACCCGATTCACCCACCCAGCTGGTCGGCGGGGCCGGCTTCGCGACCGACTTCGAGTCGGTCGAGCACCTCGAACGGATGCTCAGCCTCGACAACGCGTTCAGCGCCGAGGAACTCGGCGCCTGGGCCACCCGCATCCACGCCGAGGTCGGTGACGCCGCACATTTTCTGTGCGAACTCAAAATCGACGGCGTCG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGAATGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGAATGCGGGGATGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [42-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //