Array 1 269623-271081 **** Predicted by CRISPRDetect 2.4 *** >NC_017096.1 Caldisericum exile AZM16c01, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 269623 29 100.0 39 ............................. ATATCAGAACCATTAAATTTTATCCCATAGCCTGAAGAA 269691 29 100.0 36 ............................. GAAAGATGTGTTGCAAGGTCGTCAACAAAATTGAGA 269756 29 100.0 36 ............................. CAACAATTATTTGCGGGCCCAGAGGCGAGAGAAAAA 269821 29 100.0 35 ............................. CAAAAAGAAAGATAGGAGGTGAGAAAATGGAATTA 269885 29 100.0 35 ............................. TACTTAAAAGATTATCCAAAAGCATATACGGTTGA 269949 29 100.0 36 ............................. GCAAGAAATTTAAAAGTAGAAGCAAGAGATTTAATA 270014 29 100.0 36 ............................. TCGCAAAAGCTTTGAAAATAAATAGGGGAGCTTTCA 270079 29 100.0 36 ............................. TTGCAAAAAACTCGCATCACAACTGCAACATTTTGC 270144 29 100.0 36 ............................. TCAGTATGGTGCATAATATAAAGTGTATCAAAAAAG 270209 29 100.0 36 ............................. TTCGTAAATGCTTGTGTCTATTTTTTCTGTGTAATA 270274 29 100.0 34 ............................. CATCACTTTATTCACAGAAGGAGTAAGGCTTTTA 270337 29 100.0 36 ............................. AAAGAAATAGGGTTGTTCTGGGAGTTTTTAGACAGA 270402 29 100.0 36 ............................. TTCTATCTCATTGACAAGATTAGCATTGCCTACTTT 270467 29 100.0 36 ............................. CTTGTGCAGACTAACTTTATCTGCGTTAAGTCTCCT 270532 29 100.0 36 ............................. AAATGCAAATCGCCAAGCGGTATAAGATACACCTTA 270597 29 100.0 36 ............................. ATAGATTTAACGAATTTTGACAGAATTCACTTCTGG 270662 29 100.0 36 ............................. CTTGTTTGGAGAGGAGATTTCGTAAAGTTCTATTTG 270727 29 100.0 35 ............................. GCTTCAGAAATACGAAGAAGGGAAAAGAATGCACC 270791 29 100.0 38 ............................. AGTCTATGTATGGCAAACAATTGATAATCTTTTTCCAC 270858 29 100.0 36 ............................. TAAGGAATTACTGATCTAAATGGTTTACTATTTACT 270923 29 100.0 36 ............................. TTAACAAGAGAAGAGTTAAGCATTATACTTTACAGA 270988 29 100.0 36 ............................. ACACCATAATCTTTTAGAATGCTAATCAGATTGCTT 271053 29 93.1 0 .......................G....T | ========== ====== ====== ====== ============================= ======================================= ================== 23 29 99.7 36 GTTTTATCTGAACCATGTGGGATATAAAG # Left flank : ATGTCTTATATGATTGTTGTGTATGATGTGGAAGAGGAAAGAATAAACAAAGCAAGAAAAGTTCTAAAGAAATATTTTCTGTGGGTTCAGAATTCCGTTTTTGAAGGGGAAATTACGGAAGGTAAATTTGAAAAGTGTAGAATAGAATTATCAAAGGTGCTCGATTTAAAAAGAGATTCGATTTACTTTTATAGAATCGAGAATAAGTTTAATTATAAGAAAGTTGTGCTTGGAATAGAGAAGGAGATTACCGATAATTTTATATAATCGCATCGAAGGTATTTTTTGGCTTTTAACTAAAAGAACTGTATTTTATACAAGCTTGTTAAAGTTATTTATCACTATTAAAAAAATGGATTAGCGGGTCGATGCAAAAATGACCTCCGTTAAATGACTTTTATACAAAAATTTTACTTTTATGATATAATTATAAAAAATATGTAAACGTTAATGCCATCAGGCTTAGCTTACCTTGAAAATTATGCTATTTTTAAAAAGGG # Right flank : TTAATGAACTTTCTTCTCATACAAATACCGAAGGAGAAATTTTAAAACAAAAAAGGAGGTATTAAAATGTCTAAAAAAAATTTAACAAATGAATTGAAGGATTGGTTGCTTTCAAACTACACTTATGACAGCAGTTTTTATGATAGGTTGTATAAGGATGAAGTTAAAGATGAAGAGATGAATTATTTTGTTACGATTATGCTACAAACCCATCTAATGCAATTGTACAATCTTGTTGCAATTCTTAAAGACTATGGGGTTGGAAACGCTGAATTGATTAATGAGATTAAAAATAGGTTGGATGGCAAATGAAACTTCTTTAAATAATATTTGTAAAGTTAATATCTTCTATACATTCTAATCACCATCTATAGTTGCTGTAAAAATTTTTAGAAGAGTATGTTTTTTTTACCCTACCCTTGAGGGATTGAAACATAATTATGTAGGGTGGTGTCAGGTTTACTGTTTTTGTTTTTTAGCGTGCTTAAAAAGAATTGAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACCATGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //