Array 1 2686281-2684872 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI973153.1 Enterobacter kobei strain UCI 24 adjce-supercont-complete, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2686280 28 96.4 32 ..T......................... ACAATGTTTGCCAATACAAACAAAGTCGGCCA 2686220 28 96.4 32 ..T......................... GTCCAGATGGCTTAAAACCAGTCGTTTTCTGG 2686160 28 96.4 32 ..T......................... GTCGCGGTTTGGCAGCGCATCGCAGATATAGA 2686100 28 96.4 32 ..T......................... AATGGCGAGCCCAGCAACTTCCGACGCTTCCA 2686040 28 96.4 32 ..T......................... AACGCAGCTCTGCGCGCTCAAGTCCATCGCGG 2685980 28 96.4 32 ..T......................... ACGAACTGCGCCCGGATCTGCACCCGACACCA 2685920 28 96.4 32 ..T......................... AACGCAGCTCTGCGCGCTCAAGTCCATCGCGG 2685860 28 96.4 32 ..T......................... ACGAACTGCGCCCGGATCTGCACCCGACACCA 2685800 28 96.4 32 ..T......................... GCTGCTCTCCATGTCTTTTGCGCGCCGCATGA 2685740 28 96.4 32 ..T......................... ATTATGGCGAGAAAATCTCTGAATATTCGGTA 2685680 28 96.4 32 ..T......................... GTTATTTGTGACGCCATTTTACTGGCCGCCGG 2685620 28 100.0 32 ............................ AGTCTGCGATTTGTTTGAGTAACGCCACGTCA 2685560 28 100.0 32 ............................ TGAATTAGCTGTTCTTTACTGAACCCCTGCTT 2685500 28 100.0 32 ............................ ATTAGGTACTGCCAGTGCTCAGTCTGCTATGG 2685440 28 100.0 32 ............................ AGCGACCGTAGAGATTGAGGGAAACCCTCCCG 2685380 28 100.0 32 ............................ CTGGCGATTAGCTGATATAGATAAATTCAACT 2685320 28 100.0 32 ............................ ATAATTATGCAGTAACCCCCTTAGTGCGCATA 2685260 28 100.0 32 ............................ CGCTGAACTTCGCGTTCTGTTTTCACCAGTCC 2685200 28 100.0 32 ............................ AAGCGGATTTTGAGGCTACCGGAAAAATCTAT 2685140 28 100.0 32 ............................ GCCGCCGCACCGATATTACGAACAGCATGGAA 2685080 28 100.0 32 ............................ TATCGTGCTGACTTTGAGGATTTGCCGACCAT 2685020 28 100.0 32 ............................ ATCATCCCGGGTCAGCTCGTCACCAGCCGGTA 2684960 28 100.0 32 ............................ TTAAATGCGCAGAAGTCACCGAAGTTGTTCAG 2684900 28 89.3 0 C.C............C............ | C [2684875] ========== ====== ====== ====== ============================ ================================ ================== 24 28 97.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGCCGGGCCACGTTACGTTCATTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGGATATTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCAGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTGCCTCCTAGGTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCATAATGAATGGAATGGGTGTTTTTTATGCAGGGGGTATAAGAAGAAGGGTGTTCGACCCTAATTTTTAGTGCGTTTGTAAGGCATTGATATTAAATGGGTATTTTGAGGGGGTAAAAAAGAGGGTAAACGAAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGGGGGGATATTATTTGA # Right flank : ATAGAAAATAAGGTCTCCCCCTCCTTACTTTCTACACTGTCGAGCAGACAGCCCCGCAGCTGAAACGAACCGCCAAATAATTGTTCAAATAATCGACTGCGCCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCGC # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.78, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2696278-2695768 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI973153.1 Enterobacter kobei strain UCI 24 adjce-supercont-complete, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2696277 28 100.0 32 ............................ CTATATGCTGCGCCGCCTCCGCTACGCTCAAA 2696217 28 100.0 32 ............................ CGCCACGGTAACGGGAAGTTGCGCGCAGCGGC 2696157 28 100.0 33 ............................ GAACTGGCGGGCGTGCCGCCGTCGTCTCTGAAA 2696096 28 100.0 33 ............................ GCGAAGTACCGTGCTCTGGTGCGTGCTGATTGT 2696035 28 100.0 32 ............................ TCAGTCCATTCTCCGCTACGGATTGCGTCACG 2695975 28 100.0 32 ............................ AGAACTCGTCCCAGATGTACTGGCAGAGCTGG 2695915 28 100.0 32 ............................ ATAACGATGGTTGTACGGGATACCATCGATGG 2695855 28 100.0 32 ............................ ATCGAAAGGAAACATCGACAACTGAGCGAAGT 2695795 28 71.4 0 ...................A.ACCTCTC | ========== ====== ====== ====== ============================ ================================= ================== 9 28 96.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAGACGCAGCCCGTATGCCGTTGCCTTGGTGCATACCTGGAAGAAATGAAAACCGGCCTCACAGAATCAATGCGTGACTTTCAGGTGGTGGAATTTGAGAACGAAGCGGAAGAACCGCGACAAAAAGAGTGGCTGCTCGAAGATACAGAAACGAAATGCGACTACTGCCGGGCATTAAACCATGTACTGCTGGTATCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGATTACTGCATGACTTCACGCATTCAATGGCGGCAGATCTGGTATCTCCTCATGATGCCGGAACGGGAAATTCTGTTATTTCTTGAGTGGAGTGCGCACCGCCAGGGGCTGTCCCTTGGCGACAACGGAGAAACCCTTTTTTTGAGATGCTTTATAACTCGTTGATTTATAATGTTTTTTTTTGCGTTGCAGAAAAAAGGGTTTTGCCTGTTAACGTTGCTTAGTTGCCTTAATAACAATAAGATAGCGCTGTTTTCTTCCT # Right flank : AAACCAACCCACTGTAATATTCACCAAACCTATTTAAAACCTTATACCATCCAATCTGCACTCTCTATTTTCACAATAGATAAAAAACCTATTCACGCATAAATTATATTCCAGCAAATATATTATTCGTAAAAATAATATATTGTCATGAAAACATGATTTCCCACTTTATTACCACGATGATTATTATTCATTTGATGTCCGTCACATTTGTTTTCATTCGTTCTTCGCTAACATACTGTGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAAAAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTACCTGGAAAAATGTCGCATTAAGGTGAATGGTGGCCGTGTTGAATATGTTACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCTATCGCTAATACTACGGCGGTAATGCTGGGAATGGGAACCTCCGTTACACAAATGGCAATGCGGGAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 2711579-2711311 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI973153.1 Enterobacter kobei strain UCI 24 adjce-supercont-complete, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2711578 28 100.0 32 ............................ CACTCGCGAGAATGAGCAAGGCGGCAGTCTAT 2711518 28 100.0 32 ............................ GAACCACGGATGGATAAGCTCGCCCGGGCCGG 2711458 28 100.0 32 ............................ GGAATACTTTCAGGATTCGAGCCGGGGATCCT 2711398 28 100.0 32 ............................ GTCTTTTGCCCGCATATGCGCGTTTTTATAAT 2711338 28 78.6 0 ...............C.....AACC.T. | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCACAAGTTATTCGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGGTTGCCGGGGTTTATCGCTTATGGCGTGTTGATTGGCGAAGTGGTGGCACCGATGTTGATTATTGTCGGCCTCTTTACGCGACCGGCCGCGCTGATGCTGGCGTTTACGATGATTGTGGCATGGCTGATGGTAGGAATGGGTGAAACGTTCGCCCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATTGGCTCGCTGGCGGTGGCATTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCGGCGTGGCGTTGAGGTTTGGGCTCTGGTATGAAGGAAAGGGTCTATGGACCCTTTTTTATTGGCTGTTTGTAACTTATTGATTTTATTGTGCTGAAATGTATGTGAAGAAAAAAGGGATCGAGACGATTTTTTAGGTTATTTCTTTATCTGACAAAGTGATAGGTGTAGATTGTTCCA # Right flank : TGTAGTTCGGCACAAACAATGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGAGCCTACGACGATCCAGCCCCTACAAGGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAACGGGGGCACCGCGTCAGATTATGCGAGGACCAGATCCCCCTGCGGATGGCATGAGCACGCCAGCACGTAACCTTCGGCAATTTCCGCGTCGGAGAGCGTCATGGTACTGGTGACAGTGTACTCACCTGAAACCACTTTCGTCTTACAGCAACCGCATACGCCCGCACGGCAGGCGGCCACTACCGGTACCTTATTGCTTTCGAGTGCCTCCAGCAAAGTCGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTAAACTGAATCCCGCTGGTTGCCGCCTCTGCTACCGGCGTGAAGAATTGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCCTTCACTTCTTTCTCGACGATATCCATGTAAGGCG # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //