Array 1 11922-12277 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQOJ01000076.1 Clostridium botulinum strain DB-2 contig76, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 11922 30 100.0 35 .............................. TCTTCACCGTAAAAATTTACGAATTGCTCAGTTAC 11987 30 100.0 36 .............................. GCTTAGCAGCACCAGTTTTACCCATAAGGTTAACCA 12053 30 100.0 34 .............................. CGTCAAGTTGGTTCTTACCCGCAATCATGGCTAT 12117 30 100.0 35 .............................. GTAAAACGGCCATCTCCCCACCATGTTCATTGATC 12182 30 100.0 36 .............................. ATCGACACTTTCATGTAATGACTTAACTTTTACTGT 12248 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 100.0 35 ATTTAAATACATCTCATGTTAAGGTTAATC # Left flank : AACATGGAGTGATATAAAAATAAAAACCATGGAACTAGATGTTAACAAACAATGGAAAAAATTAAAAGATGGAACTATTGGATTTGGTAATCTTAAAAATAACAGAAAAAGAATGGTTCCACTTCCAACAGATACGCTTAAAAAATTGTTAAAATATAAAGAAAGCCATCCCACCGATTTAACTAATAGAATTGTAATATTAAATAAATATACTCTTGCTAACAAATTAGATTCAACTTTAAAAGAAGCTGGAGGAGTTACTATACACGAATTAAGACATACTTATGCTACTATATTAATAGCATCTAATACAATGGATTTCAAAACAATAGCACAAATATTAGGTCATAATGTTGAACAAACTTTAAGAACATATTCTCATGTTACAAATGAGATGTATAAAAATGCTAAAAAAGAAATTGCTAATATTTTTTAAAAATTTTTTTGCCGTAATTTTTGCCGTTTAATTCTAAAATAGCTTAAATTCAAGGATAAAGCCT # Right flank : CCACAGTAAAATAGCCATTCTCTAAAATCAATAATACCATTAAGGCATTGAAACTTCAAGGTTTTAAGGAAACTTTACCAGCCGTTTGTCAAATTTTAATAAAAATTTTTAAAGGTCACTTTAGCCCTGTAATTTCAATTGATTAAGGCGTTTCATATAAATTTATTGCTGGTAAAATATAATGTTTAGTATTCTAGTTAAGTTATACACTTTAATAGCATTGCGCAGAAAAAACACTTAAGATAATTAAATCCTAAGTATTTCTAAAAACACTAATTACTTTCTTTTTTTTCTAAGAGCATCTATTTCTTCTTCTGTTAATACAATTTTTATTGCTATTGTTTTATTATCTAAAATATCTAATCAATATTGTATTCGATTTCATTCTTCTGAAATACAAAAATCCAAAGTAAAAATTTACATTTCTACTTTGGACAATATTTTGGTGGCTCACCCGGGAATCGAACCCGGGACACCATGATTAAAAGTCATGTGCTCTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 103700-102945 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQOJ01000052.1 Clostridium botulinum strain DB-2 contig52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 103699 30 96.7 37 ............T................. TTGTATTATTGCTTATATAAACTATTACTGTATAAGT 103632 30 96.7 35 ............T................. TAGCTGCGGTACATAATTCAACAACCTTACGTTGG 103567 30 96.7 37 ............T................. AGATTTGTAGTAAATGCAGTCAATATGATGGTAAAAG 103500 30 100.0 36 .............................. ACATTAGATAATGTTAATGCAAGAATTGAACAACAA 103434 30 100.0 36 .............................. GTTGATGATGTTGTTGTATTAGCTAAAGCAATGATA 103368 30 100.0 37 .............................. ATAGATTATGTAGGAAAACATACAGTAGATACAATAT 103301 30 100.0 34 .............................. ATGAACCTTTAGAGGTAAGACTAGATAGGATAAC 103237 30 100.0 36 .............................. CAACCTCTAGGAATAGTAATAGAACCACCACCACTA 103171 30 100.0 35 .............................. TAATTATAAAGCAGATTATGAGAATATTGTTTCTG 103106 30 100.0 36 .............................. TTCATTGCTGTAATTAATCTAATATTTAAACCCTTT 103040 30 100.0 36 .............................. TACTAACTCCACCCTCTTTATTATTTAATTTCTTTT 102974 30 96.7 0 ............................T. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.9 36 GATTAACCTTAACATGAGATGTATTTAAAT # Left flank : ATTATAAAAAGAAAAGAGGAGGGGCATTGAAAATGACTGTTGATGAAATAAGAAGAAGACATTATACACAAAAAGGTAAAGAAGAAGGCAGAGAAGAAGGTATTAAACAGGGAAAATTAGAAATAGCAAAAAATTTACTAGATATTTTAGATAATAAAACAATAGCAATAAAAACTGGATTAACAGAAGAAGAGATAGATGCTCTTAGAAAAAAAGAAAGTAATTAGTGTTTTTAGGAACACTTAGGATTTAATTATCTTAGGTGTTTTTTTTCTGCGCAATTCTATTAAAGTGTACAATTTAACTAGAATACTAAACAGTCTATTTTACCAGCCATAAATTTATATAACTCCCCTTAATCCATTGAAATTACAGCGCTAAAGTGACCTTTAAAAATTTTTATTAAAATTTCACAAACGGCTGGTAAAGTTTTCTTAAAACCTTGAAGTTTCAATGCCTTAATGGTATTATTGATTTTAGAGAATGGCTATTTTACTGTG # Right flank : AAATTACAAACATCAGCACTGAACGTGTTGGTGTTTTTTGATTTTTATATGGAAAAATATAGAGTATAATAGAATTTGCAAAGAAATTTATAGAAATATAATTTATATTAGATTACTATAAATAATAACTTAGTGATGGGGGTATTAATAATGAAATTTAATAAGAAGGGGAAGGTTATTACTACTATTTTACTTGTAATTGCAGTAGTTATAGGAATATTTGCTTTTAAAATATTTCATAGAGTAACTAACTCTCCTATGATTAAAAGTGAAGATAGAAATGATAAATTTATAGCAGATATTGAGTTCTTAAAAAAGGAATTACCTAAAAAGCATAAGAATTTATTTTTTTCTAAATCAGAAGAAGAATTTAATGATGAGATTGACTCACTAATTAACAATGTTTCAAGATATAGTGATGAAGAGATAAATGGTGAACTCGCAAAAATAATATTATCTATTAATGACAGTCATACTAATGTAGATATTATGGGTTCACT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : GATTAACCTTAATATGAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 105389-105027 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQOJ01000052.1 Clostridium botulinum strain DB-2 contig52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 105388 30 96.7 37 .......A...................... GCTTTTATTTCTTCAAATCTTAAAAAATAATTAGTAG 105321 30 100.0 36 .............................. TTGCATTTAGACGAGCTAGTTCCAATTAAATCTAAT 105255 30 100.0 36 .............................. AATATATGTAAGGGGAAAAGCTCAAAAGCATATTTA 105189 30 100.0 36 .............................. TTATTGCATCCTGCAATAAGCATATAGCTTGTATTA 105123 30 100.0 36 .............................. GAATCAGCAATCCAATTGAATACAAACATATCTCCA 105057 30 93.3 0 .T..........................T. | G [105033] ========== ====== ====== ====== ============================== ===================================== ================== 6 30 98.3 36 GATTAACCTTAACATGAGATGTATTTAAAT # Left flank : ATATATGTAATACAAATAAAGTGTCGAAAGTTTAATAGCACTAAACTTTTTTTCATGTATAATGAACTCAAAGGCGCCAATATTATTGATATATCAACTTATTTAAAATCACTAGAGAGGTTGAGATAAATATGAAACTTTACGAAAAAGATAATGAATATATTTTAGATGTATTAGAAGATGAAGAAGATGAAGAAGATAGATTATTAGAAAAGTTAGGAGAAATATTATCAGAAGAAACTAGATATTTATTTTATAGATATGTTTCTGTAATAGAAACTATAAATTGTATAAAATCGACATTGTAATAGTTAAATATTTTATGAAAGCTAAGATTAAATCTAAAATATAATCTTAGCTTTTTTATTTGACGGCAAAAAAACGTCAAAAAAAATATGTTTATTTATTCTTATTTATTCTTAAATTTCTTTTGAAATTATGCTGTCAAATGTGTAGTTTAGGTATATTGCAGTATTTTTGTTCATATTTATTATATTAAA # Right flank : CCTATAATTTTTAAAGTTATTTATAAATTCAGAATAATAATATATAATATATATAAGGAAATAATACAAATGATAGTGATAAATAAGAAGGGCGTGAAATAGCTTGATTAAAAAGCATGATTTTGATGCAGCATGGAAATCAATATTAGAAGCCTTTGAAATAGAAATAGTAGAGCTACTTTTTCCAGAGATATTTGATAATATTGCATGGGAACTTGGAACTGAAAGTCTAGATCAAGAACTACAAGAAATTCAAAAGGATATTTTTGATAAAGATAGTGCAGAAAAGATAATATCAGATAAGATAATAAAGGTTAGATTAAAAGATAAAGGAAGTAAAATATTATTTATTCACGTAGAAGTACAGAGCTATAGTAGCGATGAAGCTGTATTTGGCGAAAGAATGTTTAGATATTTTTATAGAATTTGGGATAAATTTAGATATAAATACAAAGATAAATCAGAAATAGTTGCTGCGGTAATATACACTTACAAGGGTG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //