Array 1 1930-41 **** Predicted by CRISPRDetect 2.4 *** >NZ_WYCQ01000055.1 Vibrio cholerae strain EDC_692 732_Vc_EDC_692_contigs_EDC692_62, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1929 28 100.0 32 ............................ ATTACCTTAACTCCATAGTGTGTTTTTCAGTT 1869 28 100.0 32 ............................ TGCGATGGTTTTATCGAGCTTTTGAGCGGCGA 1809 28 100.0 32 ............................ TCTTTTTGTCTTTGCCCTTTTGCTTATGTTGG 1749 28 100.0 32 ............................ ATTCTTTTACAATGTTTTTCGTTAGTTTGCTC 1689 28 100.0 32 ............................ TAACACGCTTCCGGTTTGCACTCGTGCCGGTG 1629 28 100.0 32 ............................ TAAAAAGCCGGGTTCAATGGTCACTTTGATTT 1569 28 100.0 32 ............................ ACAATATGTAGTATGCCGCGGCAGCTGATACG 1509 28 100.0 32 ............................ TTTATCTTTTGCTTTCAATTGAGCCTTTAAGT 1449 28 100.0 32 ............................ ACTATTTTGATTGCTTACGTTCCAAGTGTTTT 1389 28 100.0 32 ............................ TGAATGAAGTAAAGGCGTGTATGTCATCTGGA 1329 28 100.0 32 ............................ TTGCTTGATGGTGAAGTAACCGCGATCGATAA 1269 28 100.0 32 ............................ TTTCTGCCAGATTGGATAGCAGGGATAATATG 1209 28 100.0 32 ............................ TTCAAATAGAGGGCTCGGGCGGCTTGTCGGAT 1149 28 100.0 32 ............................ TTAGTTTGGGATTGTCGTGTGGTGTGTCCGGT 1089 28 100.0 32 ............................ AAACGAAAGCCGTAGCCATACAGTTAAAGTAA 1029 28 100.0 32 ............................ ATTCGAACTGCGGCATTCAGCATGGTTTTACC 969 28 100.0 32 ............................ AGTAACAAAAAACTCGCCAAACGCATGGCGGA 909 28 100.0 32 ............................ TGTAAATAATATTTCTGCCAAAGTGTAGAGCG 849 28 100.0 32 ............................ TGAACGAGTTGGACAAACTCAGGCTCAGGCGA 789 28 100.0 32 ............................ TTAACCAAATAGCTAGGCAGTTAAACAGCGCT 729 28 100.0 32 ............................ TGGCTTCTTGTTGGTGCGTGTACGTGGAGTAA 669 28 100.0 32 ............................ TTTTCTCAGTGCCTCAACAATGCCCACGCCAC 609 28 100.0 32 ............................ ATTTAGCCTAGCCGCCGCCTCTGCGGGTGCTT 549 28 100.0 32 ............................ ACAACAGCAAGGCTTATCCACCCGAGAAGCAT 489 28 100.0 32 ............................ TCAAGCAAATCTCGATAAGCTTGATCGCTGAG 429 28 100.0 33 ............................ ATAATACACCACACAAGAGAAACGCCCCTTAAT 368 28 96.4 32 ...........T................ GAAACTTTCGTTATTAGTGATGGTGAAGGCAC 308 28 96.4 32 ...........T................ ATGACGCAGCTATCGATATTAGTCAAGGTAAC 248 28 96.4 32 ...........T................ ATCACTTTCGGGTTCCGTTTGTTCACCTTCGG 188 28 96.4 32 ...........T................ AAACGATGAGATCTGTAAAAATGGGGTTTTGA 128 28 96.4 32 ...........T................ ATTGTGTAAGGGTCGTTGTGCTTAAAGCGCTG 68 28 89.3 0 ..........AT.............T.. | ========== ====== ====== ====== ============================ ================================= ================== 32 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AGCGCATTGCATGATTTGCAGGGGTTAAATTGGTTAGGACCTTTGGCAGGATATTGCAAGATTACTACGGTTGCTCATGTGCCAGACCAAGTGGAATATCGCATCATTTCAGTTAAACGCAGTAATTTAAGCAAAGCAAAATTAGCGCGTTTAATTGCTAGAGGTAGCATAGATAAAGATGGTGAGAAACGTTACAAAGTAAAAATGCTTCGCCAAGGGTTTGATAATCCATACCTTGATCTGTCTAGCAGTTCAACAGGGCAGGTGTACCGAAAATTCTTTGAGTTTAGTGATATTCAAGCTGAGCCAGTTGATGGTGAGTTTGATAGTTATGGTCTAAGCAAAACAGCAACTGTACCTTGGTTTTAACCCTTTATTTTTACTCTTTAAAAATGTGCTTTTAAAACAAATGGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGATGATTTTTACCCTAACAGCTTGTTGCAGCTTATTTTTATCGGTTTATTCTATTG # Right flank : AGGGCGGGATCGAACTTTAACCACTGAAAATAAAAGACTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //