Array 1 1316635-1317397 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP012067.1 Aggregatibacter aphrophilus strain W10433 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
   1316635	    32	 100.0	    37	................................	CCGACCGCACTTTGCGCTGATGTTCGTGTAACACGGC	
   1316704	    32	 100.0	    35	................................	CTCTTAGTTAAGTTAATCAAGCAACAAAGCGTAAA  	
   1316771	    32	 100.0	    35	................................	CATCTCTATCATAAGTTACAGCCCCCAAAATAGGC  	
   1316838	    32	 100.0	    34	................................	AGGTGTTGGGGAGCAAAATGAAAGCATATCGTTT   	
   1316904	    32	 100.0	    34	................................	TCCAAAAAATAGCGGGCTATGTAACAACAGTGGC   	
   1316970	    32	 100.0	    34	................................	ACTGGCCGCCGTCAGCTTACGACGGAATGACATT   	
   1317036	    32	 100.0	    34	................................	GATAAAAATCGTGCCTGGTATTAATCGGGCATCT   	
   1317102	    32	 100.0	    34	................................	GTCAGTAATTCGCAATTGTCCGACTAGCGAAACT   	
   1317168	    32	  93.8	    33	......A........T................	CTCGATGCCGTGCGTCCAGTTGTGCGCGCCTAT    	
   1317233	    32	  93.8	    34	..........C..C..................	GATTTCGACGTAACCAATTCCTAACCGCTTAAAA   	
   1317299	    32	  93.8	    35	..........C..C..................	AAGCCCCGCCGCTTGCGTCAAAATAAGATTTGTCG  	
   1317366	    32	 100.0	     0	................................	|                                    	
==========	======	======	======	================================	=====================================	==================
        12	    32	  98.4	    35	GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC	                                     	       

# Left flank :   TTGATGAGATAAGTCATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGCCGTATCGCAAAACATTGCTTAGATTACGGCGTGCGAGCACAATATTCAGTATTTGAATGTGATGTCACACCTGACCAGTGGGTTATGTTGAAAAACAAACTGTTGGAAACTTACGACCCCACGTGTGACAGTCTGCGTTTTTACCACTTGGGCAGTAAGTGGCGTAATAAAGTGGAGCATCATGGGGCAAAACCGGCAGTAGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACCCTGATGGGATAGCGAACCTTATTTTCTTTAACAATTTGAATGAATTAATCTATTTGTATAACGGCGATGCGGCCGTTATACTGACTAAACTCCTTATCATAAAATCCGTTAGCGAAATACAGTGTTTAATACGCTGATTTTTCTTGCTTTTTTAGGTAGGGA
# Right flank :  CAAGATGTCGAGCAAGTCGTGCTCATTTTGTGCGGTGGCAACCACCTTTGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATGTATAAGTTTCAAGCCTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTTGGGTTAGATCATTTTAACAGCTCTTTTTGTTGACCTATGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGCAGGTCTTGAATATCCGATTTTAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCAGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGCTGCTGCATCGCCCACCAGCTCAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCTACCTCAGCAATATTATTGCGTCCGCCAAGAAGATTGATGATTTGCACCACTTGCG

# Questionable array : NO	 Score: 6.18
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.80,-5.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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