Array 1 87810-88504 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VNKM01000008.1 Listeria innocua strain UAM003-1a DIDIOLMH_8, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     87810	    36	 100.0	    30	....................................	CGTAGCGCTTTGGTAACTTTGCCTAGGATA	
     87876	    36	 100.0	    30	....................................	TGCAAAGTATTTCTTTATTTACTGCATTAT	
     87942	    36	 100.0	    30	....................................	AAGCATCTGTAAAATCTGTTAAATCGTCGA	
     88008	    36	 100.0	    30	....................................	GTCGCATATAATGCCATCTAACTCATTATA	
     88074	    36	 100.0	    30	....................................	TTTCTCACCAGTCCCAAACTCATAATAAAT	
     88140	    36	 100.0	    30	....................................	AATGGATAGAGGAACAACAAGAGAAGCAAG	
     88206	    36	 100.0	    30	....................................	AACAGTATAAAAGATGCAGCGCTCGGAAAA	
     88272	    36	 100.0	    30	....................................	TACAGAAAGGCAATCACCAAAATAATACAA	
     88338	    36	 100.0	    30	....................................	TAGCAACGATGCTGAATCTCTGTTCATGTT	
     88404	    36	 100.0	    30	....................................	ACAAGTGGAAACATTAGTATCTATGCAATA	
     88470	    35	  86.1	     0	..............C.....C....A....-...C.	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	  98.7	    30	GTTTTAGAGCTATGTTATTTTGAATGCTAACAAAAC	                              	       

# Left flank :   TTGATAAGCTGACTGCGACGATTAGCGAGTTGATTGGTTATGAGCTTCTGGAGCATGAACTGGATTTAGAGGAAGATGAAATTACAGTCATTGAATTATTCAAAGCTTTGGGTATCAAGATAGAGACAAAAAGTGATACCGTTTTTGAAAAATTAATTGAAATAGTACAAGTCTATAAATACTTATCAAAGAAAAAATTGTTGGTTTTTATTAATGTATGTGCCTATTTAACAGAAGATGAGTTACTAGAGCTAAGGCGCTATGTCTCGTTAAACCAAGTAAAAGTTTTATTTGTTGAACCTCGAAAAACAGAAGGATTTTCGCAGGTTATTCTAGATTCAGATTATTTTTTACAAGTTGAAAAAGGAATGTAGAGTTCAAATGATCTTTGAAAACTAAATAGATTTTATGTGAACCATAAAATAAGCATTCAAAATTGAAATCTTGCTATGGATGAATGGCGCGATTACGAAATCTAGGAGAATAAAAAATTCTACGAG
# Right flank :  CACATCTCTCAATCTACTCCAGCTAGAAAGAGTTAAACCATTATGAAAGAGAGGTCCCAACACATGACACAATACCACTACCTCGCCTCAAAAGCAGCACTGAAAACTACGACACACGAAAATAAGACAGATTTTGTATATCAAAACGACTTAGATTTCCTGAGCTTGAATTTTGAAGAAAATATTGATGAGCGTACAAATGAAAAATTTTCCTACTCCAAATATTTTAACCCAACCTGCAATTTCCAAGTCGCTATAAGTGAAGGGAAATTGCCGTTAAAAGGTGAAGAGCAAAATAATGATTATGAATCTAAAAGTTTAAAAATACTACACGATTACATTAAAAAAGCTAGTAAAGAAAGTGATACCCTTGAACTATACACTTCATGGAACGGCGAAGAAAATTTCCCTCTGACGAATAAAACAGAATTAGCTATAGAAAATTTAACGCCAGAAAATTTGATTTTAAGAGACAGAGAACTATTAATAATTAAAAATAA

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGTTATTTTGAATGCTAACAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGTTATTTTGAATGCTAACAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.30,-0.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
//