Array 1 18282-18698 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWV010000011.1 Pseudenhygromyxa sp. WMMC2535 tig00000017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 18282 36 100.0 42 .................................... TCTGTCTCGGCGCTCCCCGACATGAGAGTCACCAACGGCTGT 18360 36 100.0 39 .................................... TCGGCGAAGCAGGTTGAGCGCACCGTTTCGGAGATGCTT 18435 36 100.0 38 .................................... CAGCGAGCGCTGGCCGCCCTCGCTGCTGGTGACCCGGG 18509 36 100.0 42 .................................... AGGCTGTGGCAGCCGCTCGCGTGGTGTCTGGTCTTCACCTCG 18587 36 100.0 39 .................................... AGCGAAAGAACGCGTCGGAGCCACTAGAACTTGACGCCT 18662 36 83.3 0 ..A.......................GC.....GGG | C [18693] ========== ====== ====== ====== ==================================== ========================================== ================== 6 36 97.2 40 GTCTTCCTTGCCTTGATGCCGAAAGGCGTTGAGCAC # Left flank : TGCGCGCGCGTGCAGGTGTGGCGCCCCTCGTCCTCGCAGTTGCCCTGAATGAACGTTTCGACGCCTTGCTCCCTCAATATGTCGCCACGAGGGTGAGGGAGACTTCGAGCGTGCGGAGCGGATCACCCTGGGCCTGCTCGCCAGCTGGGAGCCCACTGGGGAGCACCTGATGCTTGCATGAAAAGTGCTACCATCGAGGTCAGGGTTTGCGTATTTTGCTCTCGATCCGCCAACACGACAGCTTCTGAGCAGGGGTGAGCACCTCCGGGTGTTTGCCGAGGGAAGCCCCGGTTTGACAACTTTCATGAATGAACACGCGCACTTAGAGGCTGTGGAGGGGGGCAGAGGTGCTCACCGGGGGATTTGGGGCCAGGGAACGTCGTTTGGCGGGGTTTTGGGTCAGGGGTTGGTCTCCTTTTGGCGTGCGGAGAGAGCGCACGGGGAGGTGCTTGCGGAGGAGGTGAAAAAAGTGTTTTATCTTGCGGACTTGCAGAGGCAGG # Right flank : GGGCGACGCGCTCGGGGTCACGGGTGGCCGGAAGCCCAGCCACCCAAAGGACGACTGTGCGACCCGACATCACCGCCCGGCCTACACACCGGAACGATCGCAAGACGTCGGCATCGATCCCCGCCCCACGGCCGTTGGCGGCCTTTCGGACCCGCGCCACACTCCTTGGATGGCGCGCCGCTCCCGTCGCCTGCCAGGCTTCGAAGACCTCCCCCTGCTCCTCCAGGCAGACGAGGTCGCCCAGCTCCTCCGCGTGAGCCGCAAGGCCGTGTACGCCATGGTCGAGCGCGGAGAGATCCCCGGGGTCACCAAGCTCGGCCGGCGGCTGCGCTTCCGCCGTGACGCTCTCGAGGCGTGGCTGGCCTCCTCCGTCGAGCCTGGCCCGTGGGCTGGCTAGGTCGATCCCCCGCTGCTAGGCTGGGTGGGCATCAGACGTGCGGTCGCGCCTGTCAGGAGAGACAGGCAATGACCGTGAAAATCAGGCCGTACCGCAAGGGCGG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCTTGCCTTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 10410-9137 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWV010000017.1 Pseudenhygromyxa sp. WMMC2535 tig00000163, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 10409 36 100.0 41 .................................... TTCGCCGTCGGCCCGCATTGCTGGGCCAAGGGAGCGACCGC 10332 36 100.0 35 .................................... ATATCATTGACGATCTCTTCCGTCGTCCTGACGAT 10261 36 100.0 37 .................................... TCGGGGGGGGTGCGCAGCGAGGCCCAGGCGACGAGCG 10188 36 100.0 36 .................................... GACGCGGCCCAGGCAGCCGGGTCCATCGACGTGTCT 10116 36 100.0 35 .................................... CGGTCCCGTGAGTGCGAGTCCTCGCTCCCCTCCAT 10045 36 100.0 37 .................................... TTCTCGCTTCACCGACTCGCGGTGAATCTGGCCTTGG 9972 36 100.0 39 .................................... AAGGAAGCAAAGATCGAATCCACCGGCTCCTGGCCGGAG 9897 36 100.0 36 .................................... TTTCGCAGCGTGAGGAGGCTGGAGAACAAAGCCTCT 9825 36 100.0 41 .................................... TGGATGACCCTGGTCCACTCGGTGCCGGGGGTGGCCGTCAG 9748 36 100.0 37 .................................... CATCTAACCGGGACCTGGATCACGGACTGGATCTCTC 9675 36 100.0 34 .................................... CGCGAGCCCCGAACTTGCCGCCGATGGTGACGGC 9605 36 100.0 38 .................................... AGGACACGGACCAGAGCCTCTTGGGCGCGGGCGTACAG 9531 36 100.0 36 .................................... CATCGCTCAGCGTCTTGGCCAGGATTCCGCGGTTGA 9459 36 100.0 33 .................................... GAGCAACTCGATGCGGCCGCCCTGCTTCCCCAG 9390 36 100.0 36 .................................... AATAATATCCGGCAGAGACCGAATCAGGGTGGGCAG 9318 36 100.0 39 .................................... AATGATGGGGTGGATGTACCGGCGTTGCGGTCGTGCGTG 9243 36 100.0 35 .................................... ACGCGATAGACCGGCATGCCCGCGTCAGCGTCCAG 9172 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 18 36 100.0 37 CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Left flank : GGTGTTGCTCGACTGCCTGAAGGGGTAAGCTGTGCTTGGTGTCTCGGTCCGGGAGCGGCCGATGATCCCGCGGTGCGGCTGCTGGTGATCAGCGATGCGGTATAGGTGCATGTGGACGTCCGAGACCGAGGGCCCGCTGCCGTAGGCCGCACTCGCCGAGGGGCCCGCCTGCGCTTTGCTCCCGCGGTCGCGTCTCTCGATGTCAGGCTCAGTGAGTAGGTGAATTGATTAGTCACTCCATCGATGTACATATAGTGTGTATGATCACGAACGCTAGGTTTGAGTCTGGAGTATGAAGTGTAGGTTCGTTGCACGCGGGGTTGGACGCAGTGAAACCCCGGTCTTGCGTGCAAAATGACGAATTCGGGTTCTGAGAGGGGTGTGGCGGGCTGTTTGAAAATTGAAGAGAACCACATGAACAGAGTTCACCCGAGCGCGAAATCGCCCTGCGTGCAAAAGGCCTGAGAAAGCTTGTAATTTCGAGGGGTTAGAAAAGAGCC # Right flank : CCGTTACGTCCCACCAGCCCGTCCGAGCGGGGCCTGCCCCTTCCGCCCTCGTTCGACCTGGCTGGAGCTCTCGACCACCCACCATCTCCTCGTGTCCTTGAACGCGATGAAGGCAACGCCTCGAGCAGACGCAGGCCAGTAGGCTCTCCCAAGCAGGGAGGTCACCGGACGGAGCATCCCGCGCCGGAGAAGCCTCGGATCCTTCTCCGAGATTTCTCCACCCTTTCAGCAAGACAAAGCCTCCCGCCGGCATCGCCAGCGGGAGGCTTTGTCTTGTCTGGGGAGCCCCCAGCTGCCAGTTGGGGCCCAAATTCAGCAGCGATCATGCTTGCTTGCAGCCGGGGGTCACAGATCTACGAAATTTCTGATCAGTAGCGTCAGTCAGCTGAGATCACTGGGATTTCTCGTTCTCCTCTCCGCGCGTCTCCTAAGTTTCTCCACCGGCGCCCACCCACCCTAGGGGTGAGGGAGCCCCACCGGTGGGGGAGCTTCGAGCGAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.50,-14.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 2 27896-26624 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWV010000017.1 Pseudenhygromyxa sp. WMMC2535 tig00000163, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 27895 36 100.0 41 .................................... TTCGCCGTCGGCCCGCATTGCTGGGCCAAGGGAGCGACCGC 27818 36 100.0 35 .................................... ATATCATTGACGATCTCTTCCGTCGTCCTGACGAT 27747 36 100.0 36 .................................... TCGGGGGGGTGCGCAGCGAGGCCCAGGCGACGAGCG 27675 36 100.0 36 .................................... GACGCGGCCCAGGCAGCCGGGTCCATCGACGTGTCT 27603 36 100.0 35 .................................... CGGTCCCGTGAGTGCGAGTCCTCGCTCCCCTCCAT 27532 36 100.0 37 .................................... TTCTCGCTTCACCGACTCGCGGTGAATCTGGCCTTGG 27459 36 100.0 39 .................................... AAGGAAGCAAAGATCGAATCCACCGGCTCCTGGCCGGAG 27384 36 100.0 36 .................................... TTTCGCAGCGTGAGGAGGCTGGAGAACAAAGCCTCT 27312 36 100.0 41 .................................... TGGATGACCCTGGTCCACTCGGTGCCGGGGGTGGCCGTCAG 27235 36 100.0 37 .................................... CATCTAACCGGGACCTGGATCACGGACTGGATCTCTC 27162 36 100.0 34 .................................... CGCGAGCCCCGAACTTGCCGCCGATGGTGACGGC 27092 36 100.0 38 .................................... AGGACACGGACCAGAGCCTCTTGGGCGCGGGCGTACAG 27018 36 100.0 36 .................................... CATCGCTCAGCGTCTTGGCCAGGATTCCGCGGTTGA 26946 36 100.0 33 .................................... GAGCAACTCGATGCGGCCGCCCTGCTTCCCCAG 26877 36 100.0 36 .................................... AATAATATCCGGCAGAGACCGAATCAGGGTGGGCAG 26805 36 100.0 39 .................................... AATGATGGGGTGGATGTACCGGCGTTGCGGTCGTGCGTG 26730 36 100.0 35 .................................... ACGCGATAGACCGGCATGCCCGCGTCAGCGTCCAG 26659 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 18 36 100.0 37 CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Left flank : GGTGTTGCTCGACTGCCTGAAGGGGTAAGCTGTGCTTGGTGTCTCGGTCCGGGAGCGGCCGATGATCCCGCGGTGCGGCTGCTGGTGATCAGCGATGCGGTATAGGTGCATGTGGACGTCCGAGACCGAGGGCCCGCTGCCGTAGGCCGCACTCGCCGAGGGGCCCGCCTGCGCTTTGCTCCCGCGGTCGCGTCTCTCGATGTCAGGCTCAGTGAGTAGGTGAATTGATTAGTCACTCCATCGATGTACATATAGTGTGTATGATCACGAACGCTAGGTTTGAGTCTGGAGTATGAAGTGTAGGTTCGTTGCACGCGGGGTTGGACGCAGTGAAACCCCGGTCTTGCGTGCAAAATGACGAATTCGGGTTCTGAGAGGGGTGTGGCGGGCTGTTTGAAAATTGAAGAGAACCACATGAACAGAGTTCACCCGAGCGCGAAATCGCCCTGCGTGCAAAAGGCCTGAGAAAGCTTGTAATTTCGAGGGGTTAGAAAAGAGCC # Right flank : CCGTTACGTCCCACCAGCCCGTCCGAGCGGGGCCTGCCCCTTCCGCCCTCGTTCGACCTGGCTGGAGCTCTCGACCACCCACCATCTCCTCGTGTCCTTGAACGCGATGAAGGCAACGCCTCGAGCAGACGCAGGCCAGTAGGCTCTCCCAAGCAGGGAGGTCACCGGACGGAGCATCCCGCGCCGGAGAAGCCTCGGATCCTTCTCCGAGATTTCTCCACCCTTTCAGCAAGACAAAGCCTCCCGCCGGCATCGCCAGCGGGAGGCTTTGTCTTGTCTGGGGAGCCCCCAGCTGCCAGTTGGGGCCCAAATTCAGCAGCGATCATGCTTGCTTGCAGCCGGGGGTCACAGATCTACGAAATTTCTGATCAGTAGCGTCAGTCAGCTGAGATCACTGGGATTTCTCGTTCTCCTCTCCGCGCGTCTCCTAAGTTTCTCCACCGGCGCCCACCCACCCTAGGGGTGAGGGAGCCCCACCGGTGGGGGAGCTTCGAGCGAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.50,-14.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 54743-56015 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWV010000001.1 Pseudenhygromyxa sp. WMMC2535 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 54743 36 100.0 41 .................................... TTCGCCGTCGGCCCGCATTGCTGGGCCAAGGGAGCGACCGC 54820 36 100.0 35 .................................... ATATCATTGACGATCTCTTCCGTCGTCCTGACGAT 54891 36 100.0 37 .................................... TCGGGGGGGGTGCGCAGCGAGGCCCAGGCGACGAGCG 54964 36 100.0 36 .................................... GACGCGGCCCAGGCAGCCGGGTCCATCGACGTGTCT 55036 36 100.0 35 .................................... CGGTCCCGTGAGTGCGAGTCCTCGCTCCCCTCCAT 55107 36 100.0 37 .................................... TTCTCGCTTCACCGACTCGCGGTGAATCTGGCCTTGG 55180 36 100.0 39 .................................... AAGGAAGCAAAGATCGAATCCACCGGCTCCTGGCCGGAG 55255 36 100.0 36 .................................... TTTCGCAGCGTGAGGAGGCTGGAGAACAAAGCCTCT 55327 36 100.0 41 .................................... TGGATGACCCTGGTCCACTCGGTGCCGGGGGTGGCCGTCAG 55404 36 100.0 37 .................................... CATCTAACCGGGACCTGGATCACGGACTGGATCTCTC 55477 36 100.0 34 .................................... CGCGAGCCCCGAACTTGCCGCCGATGGTGACGGC 55547 36 100.0 38 .................................... AGGACACGGACCAGAGCCTCTTGGGCGCGGGCGTACAG 55621 36 100.0 36 .................................... CATCGCTCAGCGTCTTGGCCAGGATTCCGCGGTTGA 55693 36 100.0 33 .................................... GAGCAACTCGATGCGGCCGCCCTGCTTCCCCAG 55762 36 100.0 36 .................................... AATAATATCCGGCAGAGACCGAATCAGGGTGGGCAG 55834 36 100.0 39 .................................... AATGATGGGGTGGATGTACCGGCGTTGCGGTCGTGCGTG 55909 36 100.0 35 .................................... ACGCGATAGACCGGCATGCCCGCGTCAGCGTCCAG 55980 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 18 36 100.0 37 CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Left flank : GGTGTTGCTCGACTGCCTGAAGGGGTAAGCTGTGCTTGGTGTCTCGGTCCGGGAGCGGCCGATGATCCCGCGGTGCGGCTGCTGGTGATCAGCGATGCGGTATAGGTGCATGTGGACGTCCGAGACCGAGGGCCCGCTGCCGTAGGCCGCACTCGCCGAGGGGCCCGCCTGCGCTTTGCTCCCGCGGTCGCGTCTCTCGATGTCAGGCTCAGTGAGTAGGTGAATTGATTAGTCACTCCATCGATGTACATATAGTGTGTATGATCACGAACGCTAGGTTTGAGTCTGGAGTATGAAGTGTAGGTTCGTTGCACGCGGGGTTGGACGCAGTGAAACCCCGGTCTTGCGTGCAAAATGACGAATTCGGGTTCTGAGAGGGGTGTGGCGGGCTGTTTGAAAATTGAAGAGAACCACATGAACAGAGTTCACCCGAGCGCGAAATCGCCCTGCGTGCAAAAGGCCTGAGAAAGCTTGTAATTTCGAGGGGTTAGAAAAGAGCC # Right flank : CCCGTTACGTCCCACCAGCCCGTCCGAGCGGGGCCTGCCCCTTCCGCCCTCGTTCGACCTGGCTGGAGCTCTCGACCACCCACCATCTCCTCGTGTCCTTGAACGCGATGAAGGCAACGCCTCGAGCAGACGCAGGCCAGTAGGCTCTCCCAAGCAGGGAGGTCACCGGACGGAGCATCCCGCGCCGGAGAAGCCTCGGATCCTTCTCCGAGATTTCTCCACCCTTTCAGCAAGACAAAGCCTCCCGCCGGCATCGCCAGCGGGAGGCTTTGTCTTGTCTGGGGAGCCCCCAGCTGCCAGTTGGGGCCCAAATTCAGCAGCGATCATGCTTGCTTGCAGCCGGGGGTCACAGATCTACGAAGTCGGCGACTACGGCGAGCAGCTCTACGTGGCCATGGAATTCGTCACCGGGCCGACCCTCGGCGAGTGGGTCGGCGCGCAGCGGCGAGCGGCCGAGCGCGAGGGGGCGCCGCTGCCCTGGCAACAGCTCCTCGCCATGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.20,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 2 2689659-2690075 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWV010000001.1 Pseudenhygromyxa sp. WMMC2535 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 2689659 36 100.0 42 .................................... TCTGTCTCGGCGCTCCCCGACATGAGAGTCACCAACGGCTGT 2689737 36 100.0 39 .................................... TCGGCGAAGCAGGTTGAGCGCACCGTTTCGGAGATGCTT 2689812 36 100.0 38 .................................... CAGCGAGCGCTGGCCGCCCTCGCTGCTGGTGACCCGGG 2689886 36 100.0 42 .................................... AGGCTGTGGCAGCCGCTCGCGTGGTGTCTGGTCTTCACCTCG 2689964 36 100.0 39 .................................... AGCGAAAGAACGCGTCGGAGCCACTAGAACTTGACGCCT 2690039 36 83.3 0 ..A.......................GC.....GGG | C [2690070] ========== ====== ====== ====== ==================================== ========================================== ================== 6 36 97.2 40 GTCTTCCTTGCCTTGATGCCGAAAGGCGTTGAGCAC # Left flank : TGCGCGCGCGTGCAGGTGTGGCGCCCCTCGTCCTCGCAGTTGCCCTGAATGAACGTTTCGACGCCTTGCTCCCTCAATATGTCGCCACGAGGGTGAGGGAGACTTCGAGCGTGCGGAGCGGATCACCCTGGGCCTGCTCGCCAGCTGGGAGCCCACTGGGGAGCACCTGATGCTTGCATGAAAAGTGCTACCATCGAGGTCAGGGTTTGCGTATTTTGCTCTCGATCCGCCAACACGACAGCTTCTGAGCAGGGGTGAGCACCTCCGGGTGTTTGCCGAGGGAAGCCCCGGTTTGACAACTTTCATGAATGAACACGCGCACTTAGAGGCTGTGGAGGGGGGCAGAGGTGCTCACCGGGGGATTTGGGGCCAGGGAACGTCGTTTGGCGGGGTTTTGGGTCAGGGGTTGGTCTCCTTTTGGCGTGCGGAGAGAGCGCACGGGGAGGTGCTTGCGGAGGAGGTGAAAAAAGTGTTTTATCTTGCGGACTTGCAGAGGCAGG # Right flank : GGGCGACGCGCTCGGGGTCACGGGTGGCCGGAAGCCCAGCCACCCAAAGGACGACTGTGCGACCCGACATCACCGCCCGGCCTACACACCGGAACGATCGCAAGACGTCGGCATCGATCCCCGCCCCACGGCCGTTGGCGGCCTTTCGGACCCGCGCCACACTCCTTGGATGGCGCGCCGCTCCCGTCGCCTGCCAGGCTTCGAAGACCTCCCCCTGCTCCTCCAGGCAGACGAGGTCGCCCAGCTCCTCCGCGTGAGCCGCAAGGCCGTGTACGCCATGGTCGAGCGCGGAGAGATCCCCGGGGTCACCAAGCTCGGCCGGCGGCTGCGCTTCCGCCGTGACGCTCTCGAGGCGTGGCTGGCCTCCTCCGTCGAGCCTGGCCCGTGGGCTGGCTAGGTCGATCCCCCGCTGCTAGGCTGGGTGGGCATCAGACGTGCGGTCGCGCCTGTCAGGAGAGACAGGCAATGACCGTGAAAATCAGGCCGTACCGCAAGGGCGG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCTTGCCTTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 3373626-3375482 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWV010000001.1 Pseudenhygromyxa sp. WMMC2535 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 3373626 36 100.0 36 .................................... TCGAGTTTTGACACCTCTTCCGCCCAAATATCAATC 3373698 36 100.0 38 .................................... TCAATCACGGTCGCCGGGTTGCCAGTGGCCACGCCCGT 3373772 36 100.0 33 .................................... TACAATTTGTAAGTGCGGTCACTCTCCCCCTCG 3373841 36 100.0 38 .................................... CGGCCGGCGACGAGCGCAAGACACTAGAGCCGGTGGAG 3373915 36 100.0 36 .................................... GGGCAGATCGGGCGCAATGCGCAAGACGGCACCCTC 3373987 36 100.0 36 .................................... CTGAAGGGCAGTTGCTACAGTTCCGGGACGACCTGT 3374059 36 100.0 38 .................................... GTCGCCGGCCGGAATCACGCTGGAGATTTGCAGGGTCA 3374133 36 100.0 39 .................................... CACCACCCGCACATCGGCCTCGCGGATCTGGTCAATCAG 3374208 36 100.0 39 .................................... ACCCAAGAAAGACACGACATGCAAGAACAAAACCAGTAC 3374283 36 100.0 36 .................................... ATTGCGTCTTGGCGGACAAGGTGGTCGGTCCAGGAG 3374355 36 100.0 34 .................................... GGCATAGCGCGCGCTGTGTGCCTTGCGTGTGCGA 3374425 36 100.0 38 .................................... ACGCGTCCGGGGCCGGCTACTGCATCAAAATCTACCTG 3374499 36 100.0 38 .................................... ACGCGTCCGGGGCCGGCTACTGCATCAAAATCTACCTG 3374573 36 100.0 34 .................................... GGCCTCCTCGCCACCACGGCGCTCGTCGCCTGGG 3374643 36 100.0 37 .................................... CGCAGCGGTGAGCGCGACGGTGAAGTCGTCGACCCAG 3374716 36 100.0 39 .................................... ATGGCCGCGGCGTGCCCCAGCTCCTGGTATGCCTCGACG 3374791 36 100.0 37 .................................... GGGCTGCCTCGCACCACCGGTGACGCGCGGACCGGCT 3374864 36 100.0 37 .................................... AAGGGGCGCGCTTCAGGGAGGAAGAGGTCTCGCCAGT 3374937 36 100.0 39 .................................... GCGTCGGTCTCGACCACGTGAGCGTCGAGATCGGCCGAG 3375012 36 100.0 36 .................................... GGATCAAAGCTCCGGTATGCGGCCAAGAGAACTTGC 3375084 36 100.0 38 .................................... CGCTGGAGGGACCGCGACGATTCCCGGGTTCGGCCGGC 3375158 36 100.0 39 .................................... TATCCCTGCGCCGTCGGGATCTGGCACGCGCCCTAATCC 3375233 36 100.0 37 .................................... GTGTATTCTGGGCCGATGACGGCGCGCGTGTTCCCAA 3375306 36 100.0 34 .................................... AGTCGGTGCCGAAGCGAGCCCAGCTTGTGATCGG 3375376 36 100.0 35 .................................... ACCACGGTTCGCTCCTGGTTGGTGAGCTCGCTGAG 3375447 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 26 36 100.0 37 CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Left flank : ACGCGTCGCGCCGGGGCTACGCGCCCGGTTCGGGCGTGCTCATGCAGTTCGGCGCCGATGATGGAGGGCGCGCGGCGGTCGTGCTGCGTGAGCAGGGTCGGCCGAGTCGGCCGACCCTCGATTGATGGGAGATGCTTCCTTTTTGTCGCGTTCGCCGAGGGGCCCGCCTGCGCTTCGCTCCCGCGGTCGGGCTCCCTCGACGCGAGCTCCATTGAGTAGGTGAATTGGTTAGGTATTCCATCGGCAGATATGCAGTGTGCATAGTCACAAACGGTGAGTTTGGATCTGGGATATGAAGTGTAGGTTCGTCGCACGCGGGGTTGGGCGCAGTGAAACCCCGGTCTTGCGTGCAAAATGACGAATTCGGGGTCTGAGGTGGGTGTGGTGGGCTGTTTGAAAATTGAAGAGAGAGACATGAACGGAGTTCACCCACGCGCGAAATCGCCCTGCGTGCAAAATGCCTGAGAAAGCTTGTAATTTCATGGGGTTAGAAAATAGCC # Right flank : CACGTCGATGCAGTCGGAGAAGAGCAGCTTCATGCCTTCCGCCTTGGTCTGAGGCGGCCCCATGTCGCTGATTCCCTCGTCGACGAACTGGCCCTCGAACTCCGTCGTCATGGTCTCAGGGGTGACTTCCAGGACCTCGGTGATCGACGACAATAACTTTTGCCGGTCGACGACAACTAAACCTGCCGGTCCGAGCCAGCCAGAACGCGCGTGGGACGCTGGGGAGCAGGAGCCCCCACGTGGTCACGGACGAGCAAGTACGGCTGCTACGGAGCAAGATGAACCAAGGCAAGACACAGCAGGCCGCAGCAGCGGCGGCGGGAATGAGCGTGAGGTCGGCGCGGAAGTGGCAGAGCGGGCCACTGCCCTCGCAGACCAAGGAGCCGCGGCACTGGCGGACGCGCAAGGATCCCTTCGAGGGGGTGTGGGAGGAGAAGATCGTCCCGCTGCTCGAGCGGGACAAGGAGGGCGAGCTCGAAGCCAAGACGCTGCTGAAGCAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.20,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 4 4640661-4642744 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWV010000001.1 Pseudenhygromyxa sp. WMMC2535 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 4640661 36 100.0 41 .................................... AACACGAACGCGCTCCGCATCGGGATCAAGGAGGAGAGTTG 4640738 36 100.0 37 .................................... CCCTCAGGCCGGTCCCTGACCCCTCGCTGTTTCCCAG 4640811 36 100.0 39 .................................... CATGAAGCCGCCCGAGCTCCGCCTCGACATCATCGGCCT 4640886 36 100.0 35 .................................... CGTGGCCGCATCGAATATGCGCTTTTGGGCCGTGG 4640957 36 100.0 36 .................................... CCCACTTTTCAGACTGGAGCGAGTTTTAGGGCTGGC 4641029 36 100.0 34 .................................... CTTAGGTCTCGCGCCGTACACACCATTAGCTTAG 4641099 36 100.0 39 .................................... CCTGGCTATCCGCAGACGACCAGGATCACACGATTGCAG 4641174 36 100.0 39 .................................... CCGAACACCTCTGCCACCACTCCCTCGCGGTGCAGGCGT 4641249 36 100.0 37 .................................... ATCCCAACCGCGCACCGGGTCCGCCAGCGCGACGCTG 4641322 36 100.0 37 .................................... AAGTGTCCAAACAGCGTCGCGTTATCCGCGACAGTTT 4641395 36 100.0 36 .................................... TTGCGGGGGGAGCGGCGCGAGACCCTGGCCGGGGCC 4641467 36 100.0 36 .................................... TCGGGGGCGATGATGTCCGGCAGGAGATTGGCTCGG 4641539 36 100.0 37 .................................... AGCGCCTCGGCCTCCTCGTCTAAGCGCTTGCGGAGGA 4641612 36 100.0 38 .................................... CGGTGAGCGAGTGCGAGGCGCGCCCGAGAAATCTGCGG 4641686 36 100.0 36 .................................... GACATACCCCGAAAGCCCCGCCGCTCACGCCGTGAA 4641758 36 100.0 39 .................................... ATAGCTTTCGGGAGCCGCGACGGCCATTGATATAGTCGA 4641833 36 100.0 38 .................................... GACACCCTCACCAGGGCTGCCCAGCTGGCGATCTCCGG 4641907 36 100.0 37 .................................... ACCTCGAGTCCGATCTCCACGCTGGCTCCGCCGGCAG 4641980 36 100.0 40 .................................... GCTGCATTGCTGAACTTGTCGTCATACCCTCGGGCCTGTG 4642056 36 100.0 35 .................................... GCTGGCGAGTGGTAGGCGACGGACTCGTACACTTT 4642127 36 100.0 35 .................................... AGGATCCCGCCCTCGGGTGGTGAGGGCACCTGCTG 4642198 36 100.0 36 .................................... TCGTGGATCAGGATCGCTCGGCGCTCGGCCGCGGCG 4642270 36 100.0 38 .................................... CGTAACTGCCCGAGACACCCCGCCAAAACCGAATCACC 4642344 36 100.0 39 .................................... TCCGACTCCCTTTTGCGTTTTCCCCACCAGTCCCTCCCG 4642419 36 100.0 35 .................................... CCCGTCCTCGCCGCGGCAGAGCACCTGCCCGTCCG 4642490 36 100.0 43 .................................... CCGGTCTGAGCGTAGGGAGCGAAGGGCGGGTAGTCGGTGCTGT 4642569 36 100.0 34 .................................... GACCTGTTCGTCCCCGCCTTGCTCGTCTACCCGC 4642639 36 100.0 34 .................................... GCTTTGACAGGCCCCTCGCGTGGCCGTAGCCCGT 4642709 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 29 36 100.0 37 CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Left flank : GTGGCTGGTCCGGACTTCGTGGATCTGGTGATGAGCCGGGAGGCGGATGTGCCGGGGCCGTTTTTGTTGCCGGATGATCGCTTGTTGAGCACCGATGCGCGGCTGGTGGTTTGGCGGATGGAGGGGGAGGCCTTTGTGTTGTTGTCGCGGGGGAGCGTGCTGGAGGTCGATGCGGTGACGGTGGTGGATGGTGGGGATATTGATGGGATCACGGTGGTCGAGGGGTAGATTTGTGCATGGGTGAATTGATTGTGATTGTTCTCATGTTGTGTGCGTGGGTCGAGTTGGGGTATTGAGGTGTAGGTTCGTTGCACGCGGGGTTGGACGCAGTCAAACCCCGGTCTTGCGTGCAAAATGACGAATTCGGGGTCTGAGGTGGGTGTGGCGGGCTGTTTGAAAATTGAAGAGAGACACATGAACGGAGTTCACCCACGCGCGAAATCGCCCTGCGTGCAAAAGGCCTGAGAAAGCTTGTAATTTCATGGGGTTAGAAAATAGCC # Right flank : CTCGCCGATCGGAGCGGGGCTGGGGAAGGACATGTCCGCCTTCCGCCCTGGCTCTTGCGGTTCGAAAAGATCCTTCCGTCCCACGACAACGTCCCTGGAGCATCCTCACACAAAAAAACACCCGCCCCCCTCGATCCATCCCCGCCCCTCGCTCACTCCCCCCAGCGAGCCCAACGCATGCAATCCCCCAAGTTCATCCCGCCCAACCCGAACGCCGAGCTAATCCCCGTTCGAATGTGCAATGAGTTGGTCTATTGCGAACGCCTGTTCCACCTCGAACACGTCCAGGGCATCTTCGTCGACTCTGCCGATACCGTCACCGGTCGCGCCGAGCACGAGCGCGCCGCTCGTAGAGGCAGACGCTCGCGCAAGTCTACACAATCCCCAGAACCACCGCCTTGGCCCGAGCTGCCGCGGACCCTCGAATCGAACGCGTCCAACCTGGGCGTCTGCGGCAAGATCGACTTCCTCGAGGTCGAGGACAATCGCGCCATCGTCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.20,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 5 5369190-5370839 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWV010000001.1 Pseudenhygromyxa sp. WMMC2535 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 5369190 36 100.0 39 .................................... CCCTTGCCTCGCCGCCTCTTCCTCTTCTTGGCGGCGGCG 5369265 36 100.0 41 .................................... TAGCAGCCCCTTGCCGGCTCTGTCCAGCATCGACTGGACTT 5369342 36 100.0 34 .................................... AGATCAATCAACGTCACATCCCCTGTAAGCTTAT 5369412 36 100.0 39 .................................... TTTTGATGTGCTGGACGACATTGACCCCAGTCAACGCGG 5369487 36 100.0 40 .................................... GGGCTTTCCATCCTTTGCATTTGCCGTACTTCTCTTCGAT 5369563 36 100.0 38 .................................... GACTCCCGCGACCGCTTTCCTTCTCCCGACCGCTGGAG 5369637 36 100.0 37 .................................... CTGTGGCTGTGGCTTCATTTGAGGAACCTTCTGTCGG 5369710 36 100.0 36 .................................... TACTGCGCGTCAACGAGGTAGCACTCTGCGGTTTTG 5369782 36 100.0 34 .................................... TCCCCGCCGCCGGAGTAGACGCCGCAAAGCACTA 5369852 36 100.0 36 .................................... CGCAAATGGCGTATGGAGTTAGGTGGTGCTTCGGAT 5369924 36 100.0 36 .................................... GCATCTGGACCCCAGGAGGTGGCGGAGCGCTTGAAG 5369996 36 100.0 36 .................................... GTGGCGTCCGGCCCCCGAAGTAGGAGGTGCGCCTCG 5370068 36 100.0 41 .................................... TCGGGATCTGTGGACACGTCTACCCAGTGTTCCCAGTACTG 5370145 36 100.0 36 .................................... CTCTCGTCCGGGCCGACGGCTCAGAGTGAGAGCGAC 5370217 36 100.0 38 .................................... GAGCAGCGGCTCGGCCGCCTCGCTCCCTTGAGGGTCGA 5370291 36 100.0 37 .................................... CGGCTTTCCGCCGCAGCAATCGCCACGGCGAAGTCCT 5370364 36 100.0 36 .................................... CGCGTGATCACGTTGCCCTTGGCGTCGGTGGCCCAG 5370436 36 100.0 35 .................................... ACGTCAACCGCCGATTCCTTCGCCAGGTCCACTAC 5370507 36 100.0 35 .................................... GACGTTGACGACGATCCGATCCTCTTCTTCGATAG 5370578 36 100.0 37 .................................... GCCCCCAGCGACCGCGACGTCGAGATCGCCAAGCGCA 5370651 36 100.0 38 .................................... GATTTGTCGCCGTGGTAGGTGTAGGCGGTCGGGCGCCA 5370725 36 100.0 43 .................................... GAGGACACCCCCTACGTCACCGAGTCCGGCTCCGATTGGGGGG 5370804 36 91.7 0 ...............C...............CC... | ========== ====== ====== ====== ==================================== =========================================== ================== 23 36 99.6 37 CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Left flank : GCGTGCCGAGCGGATCACCTTGGGCCTGCTCGTTGGCTGGGAGCCTCCCGGCGCGCTCGCCAATGTGGTCTTCAGCCGGCTTGGGTTCGAGCTTCTCTTTCTCTCGCCTTCGTCGCGGCTGGTGCTGCTGGATCCTGCGGTGGAGGAGGTGGCGCTCAGCGTCGACGGCCACGGCCACGGTGGCTCGAGTAGGTGGACGCCGAGCCTGCGGACGAGTGGGTGAATTGTTGAGTTGTCCTATGGGTATATTTATTGTGATTATTCTCGTGTTCGGTGAGATTGGATCTGGGGTATGAAGTGTAGGTTCGTCGCACGCGGGGTTGGGCGCAGTGAAACCCCGGTCTTGCGTGCAAAATGACGAATTCGGGGTCTGAGGTGGGTGTGGCGGGCTGTTTGAAAATTGAAGAGAGACACATGAACGGGGTTCACCCACGCGCGAAATCGCCCTGCGTGCAAAAGGCCTGAGAAAGCTTGTAATTTCATGGGGTTAGAAAATAGCC # Right flank : CAAGCACTCGCGCAATCCCCCGAACTGCCTCCCTACGCCCCCTCCATCATCATCACCCGCAACACCTGAGCAATCGCCCCAGGCCGCATGCTCGTCGCCATGTTCCGCAGCAAATAAGGCGTACACCAACACCCCGCACAGCGCGGAGCCGGCAACGCTCGAAACGCCGCCTCAAACCCAGCATCACGCACGTTCGGCAGCGCCGCGCTCGGCATCCCGAGCAGCTCGCAAGGCGAGAGCGTGCCCTCGGATCCGAGCGCACAAAAGAACCGCCCCGCATGGCAAGGCACCTTGCCGACATGCGAGGCGTCGCTGCGCCCAATGTCCTGGTGAAAGCCGCCACCAGGCTGCCAATTGTCCCGAATGAAGCGCAGCATGTCGACGGAGCCAAAGATCGCGGCCCCGGCTTGCTTGGCGGCGATCACCTCCGACATGAAGGCGCGCAGCTCGGCCCGCGAGGGGGTGAGCGCGTCGACGCGGCCCGAGGCGTAGCGCAGGTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCCGCCCTCGTTTGAGGGCGGCCCCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.20,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 6 7074302-7074718 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJWV010000001.1 Pseudenhygromyxa sp. WMMC2535 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 7074302 36 100.0 42 .................................... TCTGTCTCGGCGCTCCCCGACATGAGAGTCACCAACGGCTGT 7074380 36 100.0 39 .................................... TCGGCGAAGCAGGTTGAGCGCACCGTTTCGGAGATGCTT 7074455 36 100.0 38 .................................... CAGCGAGCGCTGGCCGCCCTCGCTGCTGGTGACCCGGG 7074529 36 100.0 42 .................................... AGGCTGTGGCAGCCGCTCGCGTGGTGTCTGGTCTTCACCTCG 7074607 36 100.0 39 .................................... AGCGAAAGAACGCGTCGGAGCCACTAGAACTTGACGCCT 7074682 36 83.3 0 ..A.......................GC.....GGG | C [7074713] ========== ====== ====== ====== ==================================== ========================================== ================== 6 36 97.2 40 GTCTTCCTTGCCTTGATGCCGAAAGGCGTTGAGCAC # Left flank : TGCGCGCGCGTGCAGGTGTGGCGCCCCTCGTCCTCGCAGTTGCCCTGAATGAACGTTTCGACGCCTTGCTCCCTCAATATGTCGCCACGAGGGTGAGGGAGACTTCGAGCGTGCGGAGCGGATCACCCTGGGCCTGCTCGCCAGCTGGGAGCCCACTGGGGAGCACCTGATGCTTGCATGAAAAGTGCTACCATCGAGGTCAGGGTTTGCGTATTTTGCTCTCGATCCGCCAACACGACAGCTTCTGAGCAGGGGTGAGCACCTCCGGGTGTTTGCCGAGGGAAGCCCCGGTTTGACAACTTTCATGAATGAACACGCGCACTTAGAGGCTGTGGAGGGGGGCAGAGGTGCTCACCGGGGGATTTGGGGCCAGGGAACGTCGTTTGGCGGGGTTTTGGGTCAGGGGTTGGTCTCCTTTTGGCGTGCGGAGAGAGCGCACGGGGAGGTGCTTGCGGAGGAGGTGAAAAAAGTGTTTTATCTTGCGGACTTGCAGAGGCAGG # Right flank : GGGCGACGCGCTCGGGGTCACGGGTGGCCGGAAGCCCAGCCACCCAAAGGACGACTGTGCGACCCGACATCACCGCCCGGCCTACACACCGGAACGATCGCAAGACGTCGGCATCGATCCCCGCCCCACGGCCGTTGGCGGCCTTTCGGACCCGCGCCACACTCCTTGGATGGCGCGCCGCTCCCGTCGCCTGCCAGGCTTCGAAGACCTCCCCCTGCTCCTCCAGGCAGACGAGGTCGCCCAGCTCCTCCGCGTGAGCCGCAAGGCCGTGTACGCCATGGTCGAGCGCGGAGAGATCCCCGGGGTCACCAAGCTCGGCCGGCGGCTGCGCTTCCGCCGTGACGCTCTCGAGGCGTGGCTGGCCTCCTCCGTCGAGCCTGGCCCGTGGGCTGGCTAGGTCGATCCCCCGCTGCTAGGCTGGGTGGGCATCAGACGTGCGGTCGCGCCTGTCAGGAGAGACAGGCAATGACCGTGAAAATCAGGCCGTACCGCAAGGGCGG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCTTGCCTTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //