Array 1 285126-280462 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025571.1 Acidipropionibacterium jensenii strain JS279 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 285125 29 100.0 32 ............................. ACCAACTGGATGCGCTACCGATCGATGCACGA 285064 29 100.0 32 ............................. TCTGCCCCGTCGACGTGCTGCTCTGTGGTGAC 285003 29 100.0 32 ............................. TCGGCGGACACCTGGTGCTTGCCGGGCTCGAT 284942 29 100.0 32 ............................. TAGTAGCGCAGGCTGTCACCGTCTTGCAGGAG 284881 29 100.0 32 ............................. GTCGCCTCCGGTGGCGGCGCCTGATCGGCAGG 284820 29 100.0 32 ............................. CTGGCAGCCACCGAGTCGCTGTCGTCGGTCAC 284759 29 100.0 32 ............................. GGTCCGGCTGGGACGTCACCGGCCACCCCTGC 284698 29 100.0 32 ............................. GGCGGAACTGCCGACGGAGGCAACCCCAGCGG 284637 29 100.0 32 ............................. GCTCGGTGCCCGTCGACGCCATGGGCGACGGA 284576 29 100.0 32 ............................. CCTGCCAGCGAACCGTCGACGGCGAACTCCGC 284515 29 100.0 32 ............................. GTCGACTCGCTCGGGGCTGCGCTTCACGCGGT 284454 29 100.0 32 ............................. GGTGGTAACCGTATCTTTACGCTGGTCCCTGT 284393 29 100.0 32 ............................. CGCATCAACGACATCAAGGCCATCGTCACCGA 284332 29 100.0 32 ............................. ATCGGCATGGCGCTGGTCGAGTCCAAGACTGT 284271 29 100.0 32 ............................. CGGACCGTCGCGCTGGTCCTTGCTCTGGTGCT 284210 29 100.0 32 ............................. ATACAGCGACTCCCGCTATTCACATAGACAGG 284149 29 100.0 32 ............................. ATCTTTTTCTGGGCGTGTGCGATGCCGGTGAG 284088 29 100.0 32 ............................. GAGGACAGACGATGGATCTGGACGCCATCAGC 284027 29 100.0 32 ............................. ACTGTGGCCTTGTGTCATAGAGAGGCTATTAC 283966 29 100.0 32 ............................. TGGGAGGACAGGCCGCACGATGGGCTGAGGGT 283905 29 100.0 32 ............................. ACGAACAATCGCACCTACCGTAATTTGGCGTA 283844 29 100.0 32 ............................. TCGCCTGGTACCGCGATATGGCGCGCGCTCTT 283783 29 96.6 32 ............................T GTCCATCGAGCAGACCACCGGCTTCCTCGGCG 283722 29 100.0 32 ............................. GCACCATCGCGTCCTGGCAGTCGCGCGGGCAG 283661 29 96.6 32 .................C........... GCGGCGCCTCTACATGCTGTTCTGGCGTGGCG 283600 29 100.0 32 ............................. AACGTCTCCAAGTCCGGCGCGGCGACCACCAC 283539 29 100.0 32 ............................. TACCTGGACGGACAGCAGCTGGCCAAGCTGCT 283478 29 100.0 32 ............................. GCGCTGGCCTCTGGGACTGTCATCCGGGATAG 283417 29 100.0 32 ............................. CCACCGGTCGCACCAGGTCTTGACGGTGGTGC 283356 29 100.0 32 ............................. CGGCGACGGCTGCCACTGGGCGGTGCGGACCC 283295 29 100.0 32 ............................. CGCTGGCAGGCGCACCGTGCCGACCCCGACCA 283234 29 100.0 32 ............................. GGCGGCCAGACGTTGAAGATAAGCATGCCGAA 283173 29 100.0 32 ............................. TGGGAGGACCGCCCGGACGATGGGCTGAGGGT 283112 28 93.1 32 .....................-......T TTTTCAATGAATCAAGAAATAGAGTTGTGTTC 283052 29 100.0 32 ............................. ACGGACAGGAGTACAGCTGGGAGTTCCGGGCC 282991 29 100.0 32 ............................. ATGCTGTGTGATCTTCCGATCATGTGCGATAC 282930 29 100.0 32 ............................. CCAATGTGCCCCATGCGCTCCGTCCCCTGCTG 282869 29 100.0 32 ............................. ACCATGCAGCTGGTGCCCGGAATCGCCTCGAG 282808 29 100.0 32 ............................. CTGGGCAGGATCGTCCGCTCGATGGCGCGGTG 282747 29 100.0 32 ............................. ATCCCATTCAAGGCGGCGACCGGCCACCCGAA 282686 29 100.0 32 ............................. ACCAAGACCCCGCAGAAGCTGTCCACCGATGA 282625 29 100.0 32 ............................. TCGGGCAGGGCTGTCAGGTGCGGTGCCATCGC 282564 29 96.6 32 .............G............... ATGACCGCACAGTCGGTGCTGACCGGTGCGCT 282503 29 96.6 32 .............G............... AAGGTCTCCCTGGAGGACGTTCAGGCCGAGTC 282442 29 96.6 32 .............G............... GACTTCATCTCGGCAGCCCAGACCTCCAATGG 282381 29 96.6 32 .............G............... CCAGGCACACCAGCCAGCGTCGAAGTCGACCA 282320 29 96.6 32 .............G............... CCAGGCACACCAGCCAGCGTCGAAGTCGACCA 282259 29 96.6 32 .............G............... TAGCGGGCGGTCGAGACTGCTCTCCCGGCGGC 282198 29 96.6 32 .............G............... GCGGCGTCCGACAAGCTCAAGGCGGCCCAGGA 282137 29 93.1 32 .............G.......T....... CAGTTCGCCGTTCGTGTGGGGGCTGCCGGGGC 282076 29 96.6 32 .............G............... CTTCCCGCCGCCGTCAACCGCGCCGCCCTGGC 282015 29 96.6 32 .............G............... GGTTTCGGCCCGGCGATGGCCGAGGCCAAGGC 281954 29 96.6 32 .............G............... CAGGGCTACAACTGGAACAACTCGGGCAACTG 281893 29 96.6 32 .............G............... GTTCTGGTGCCCACATCTGCTCCCGGTGCCGC 281832 29 96.6 32 .............G............... TCTCCGGCGATCAGCAGGGATCAAGTCGTCGA 281771 29 96.6 32 .............G............... TAATCTCCCTCCGACGAGGGTGGTGATTCACG 281710 29 96.6 32 .............G............... CTCAACTCGACTCAGACGGTGGCGGTCAGGGT 281649 29 96.6 32 .............G............... TCTGGCCTGCCATGGTGACAGCGGTGGCGGCG 281588 29 96.6 32 .............G............... GTCGCGTCGGATGCCCGGACGGCACCGTCGAC 281527 29 96.6 32 .............G............... AACCTGTCGGATTCCTTCCGTGCCGGAGGGTC 281466 29 96.6 32 .............G............... CCGCCCCACAGGATCGACACCTGAGTGCCGAC 281405 29 96.6 32 .............G............... TCGCAGCAGATCCAGCTGCGGGCCATTGCCCA 281344 29 96.6 32 .............G............... GCGCTGCGTACCGCCAAGTCTCGCACTGACGC 281283 29 96.6 32 .............G............... TCAGTTCGCAAGTCGATGTTGGGAAGTACCTC 281222 29 96.6 32 .............G............... TCAGGGCCGGGGTCGTCGTGGTCGGATTGGTG 281161 29 96.6 32 .............G............... AAGCACCAACTGCCGGCAACCATCCTCGCCGA 281100 29 96.6 32 .............G............... CCCTGCGCCAGCACGATGACGCCGGCCACAGT 281039 29 96.6 32 .............G............... CCCTGCGCCAGCACGATGACGCCGGCCACAGT 280978 29 96.6 32 .............G............... TACTACCGCAAGGTGATGACGTCCCTGACCCG 280917 29 96.6 32 .............G............... CCCTTCTCCTTCGCGACCACGATGCTGGCCAT 280856 28 93.1 32 ....-........G............... TCCGCATTCTGAACCACCATCACACCAAGGAG 280796 29 96.6 32 .............G............... CTGAACATGGCCCGGCTAGCATCAAACAGCAC 280735 29 96.6 32 .............G............... ACACGCTCCCTCCGGTGGCATGCTCCGATGTC 280674 29 96.6 32 .............G............... GCTACTTCTCTGTCTGTCACGTGTGAGGCGAC 280613 29 96.6 32 .............G............... TGTAACCGACAAGTGAACCTGGACCAGGGATG 280552 29 96.6 32 .............G............... CCGGCTGAGCTGGTGGACGAGGCCACGGGTGA 280491 29 82.8 0 .............G........G.C.GA. | T [280467] ========== ====== ====== ====== ============================= ================================ ================== 77 29 98.0 32 GTCGTCCCCGCGCAAGCGGGGGTAATCCG # Left flank : CGGATAGTGAAGGACATCATGGACTTGCTCATGGGTGAATTCATTGAGCCCGAGACTGAAGACAATCGTGAGCTTTGGGCCGGCAAGGACGCAGCTGTCAGGAGCGGCCACAATTGGGGTCTCGACGCGGATGACATCGACGACCTTCTGAGTGGCGGGTACCTGAGCGTGAGCGGGCCGGAGATTCCAGATCAGGCCGACTGGTGACTGTCATCGTCCTGGTTGCCGGGCCTGAGGGTCTTCGAGGGCACCTCACCAGGTGGATGGTCGAGGTGCAAGCAGGAGTATTCGTAGGCAACCCCAGCCGACGCATCCGGGATCTCCTCTGGCAAGTCCTGTCGGACAGAATCGACTCCGGCCAGGTCGTCATGGTCGAACCCGCACAGACCGAACAAGGCTGGGCAGTAAGGACTGCCGGAACCGATCGCTGGGCCCCTGTAGACTTTGATGGGGTGACTCTGGTTGCCCGACGCCGCATGCAAAAGCCCTAGTCACCAAGT # Right flank : TGAAGCTTCCCGGACTTCTGAGGAAAGTCATAGTTTCGAGAATCGGGTAGGATCACATCATGTCAGGATCGAAGTACAGTCCGGAGTTCAAGAACCAGGTCGTTCTTGAAGTCGTGGACAAGCATCGCACCATCAAAGCCGTAGCAGAATCATACAATCTTGTCGCTCAGACTGTCGGCGTATGGGTCAAGGAGTATCGCAAGAAGAATCCGGACCCGGAAACCGAGAACCTCACCAGTGCCGAGTCGGCCGAACTCGAACGGTTGAGGAAGGATCTCCGTGAGGCCCGGATGGAGAACGAGTACCTAAAAAAAGCGGCAGCCTTCTTCGCGAAGGAATCACAGTAGCTGTCCGCTACACGTACATCTTCTCACAAGAAGGCAACTACCCCGTTCGGCTCATGTGCCGATGCCTCACCGTGTCCCCCTCGGGATATTATGACTGGCGAGCCAGGCCCATTTCTGCGACCGCACGTCGACGCCGTGACCTCGCTTCCAAGA # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.73, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCAAGCGGGGGTAATCCG # Alternate repeat : GTCGTCCCCGCGCGAGCGGGGGTAATCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCAGGCGGGGGTAATCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //