Array 1 228873-228234 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQHN01000002.1 Pectobacterium parvum strain NCPPB 3395 ID_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 228872 29 100.0 32 ............................. CTAGCGGCGAATATGTCAGAGCAGTAAAATGG 228811 29 100.0 32 ............................. AAATCAACTAGCAACGGCGTTAGTCTAAACAT 228750 29 100.0 32 ............................. ATGGGCGCTGCGAGGAATTTTTTAGTTTTATC 228689 29 100.0 32 ............................. ATGATGCGCTTGATGATGCGTTTCATGCTGGC 228628 29 100.0 32 ............................. AGGACTAAATAACATGAATACTTTGACTAATG 228567 29 100.0 32 ............................. GGCAGATGGACAGAATGACCTGTATGTCTAAC 228506 29 100.0 32 ............................. AGATTGGCATTAAACGCGGACTCCCCTTTTTC 228445 29 100.0 32 ............................. TTTGTGCTCAGACCGCCGAAATCGAGCAGGTC 228384 29 100.0 32 ............................. CTCGGGATGAGAGCGCTTATGTCGTTCAGCTA 228323 29 96.6 32 ................A............ AATGACTACCTTACTAAAACGGCAACAGCTAA 228262 29 89.7 0 ............TT.............T. | ========== ====== ====== ====== ============================= ================================ ================== 11 29 98.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGATTGAGGAAGTCTTGTCTGCGGGGGGTATTACGCCACCGCTCCCGCCGGATGATGCCCAGCCACCGGCGATCCCAGAACCGAAACCGTTTGGTGACAGCGGCCACCGAGGGCAGGGTTAAATGAGCATGCTGGTGGTTGTGACGGAAAATGTCCCGCCGCGCCTGCGCGGCAGGCTGGCGGTGTGGTTATTGGAAATCCGCGCAGGCGTGTATGTCGGTGACACTTCACAGCGGGTGAGGGAGATGGTCTGGCAGCAGATTATCGAACTGGCAGAACAGGGCAACGTGGTGATGGCATGGGCGACGAATACGGAATCCGGCTTTGAGTTCCAAACCTGGGGCGAAAACCGCCGAATGCCGGTAGATCTGGATGGTCTCCGGTTAGTCTCTTTTTCACCTATTGAAAATCAATAAGTTAGCGATCTTTAACAACATGGAAAAATCGGTAGAATTTTTTATGCCGAAAAAAGTATTATAAAACAACTCTCTATCTTTAGA # Right flank : ATGTGAAATGTAAATTACACATATTTCCATATTGTCAACTTGTTCTGTTTATGGCATGGTGTTTCCAATTTGGAAATACTAGGGAAGGCATCAGAATGCATGTTATTTCGCGGGCACCTTTCGACACTGCAACCACTCAGTTTCCGAATCAGGCGGCAGCACTTGATGACCTATATCGGGTTATCAAACGCGAAATGTATGCAACGCCGGACGATATGAAAAAACGCTTCCCCAGTCTAGATAGGATGAAATATCGGGAAAAATGGTGGGTTATTGATATTGGTGGCGGGCATCTTCGAGTGATGTTTTTTGCTGATTTTGAGCGAGGGAAAATCTTCATCAAGCACATCACATCCCATGCAGAGTACGATAGGCTGACAGAGTATTACCGGAGGAATAAAGAATGATGTACGCAGACGCCATCAAGGCAGCTAACAACCTGACGAGTATCGTACCATTCCTCGGAGGCAGCGCCTCTCGTAAGGATTATGAGGATGCGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //