Array 1 439533-440068 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP048008.1 Staphylococcus lugdunensis strain CGMH-SL118 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=====================================	====================================	==================
    439533	    37	  97.3	    35	....................................G	AATGGTCATTAGAAACAGGTGAAGTCAGAGGGAAA 	
    439605	    37	  97.3	    35	....................................G	CAAAACCGAGTGAATTAGAGTTTTAAACAAGCTTG 	
    439677	    37	 100.0	    36	.....................................	TCTGTATTTCTATTAACCAATTCATAAGTGTCATTA	
    439750	    37	 100.0	    34	.....................................	TCATCATATCCTTTTATATAGTTTTTGTTTTGTT  	
    439821	    37	 100.0	    34	.....................................	GGTAAATCTTCTACACTGTCGACTGGGTCTTCTA  	
    439892	    37	 100.0	    31	.....................................	AGAATGTTTAAACAAGGTGTTTCAAAACCTG     	
    439960	    37	 100.0	    35	.....................................	CGCTATTCAATAAGTTTTGTATTTGTTGTCTCATT 	
    440032	    37	  89.2	     0	..............................A.A..GA	|                                   	
==========	======	======	======	=====================================	====================================	==================
         8	    37	  98.0	    34	AATCAGAGAATACCCCGTATAAAAGGGGACGAGAACT	                                    	       

# Left flank :   GATTTTTTAGAAGTATCATGATACAATTTGATGCTTTTTTTGAGTCTCATAAACTTTATGATAAAGAAACATTGGAATTTTTAGAGCAAAATGTAAATATAGTTAATTATAAATTGAAAAGTGTCCGTTTTCATATGGAAAAGGTTAAAATTCCATCTTTTAAGGGAGAAATTGTATTTAAAATAAATGGGCCATTGCCGTTTTTACAATTAGTTTACTTTTTATTAGCTTTTGGAGAATTTTCAGGTACGGGTATAAAGACTAGTCTAGGTATGGGGAAATACAATATAGTTGATAAAAATCAAGATAACTAAAAAGTAGTTACACTTCATAGTCCATTTAAAACAAATCGAATTTATAGTATAATATATATAGGGAAATAACCTTTAAGTGTCAAATTTTTTGACAAATAAGGTATTACCTAGAGTTAGATTGTCAAAATTTTTGCCAATTTAAATTATCCTTCAAACTTAGGCAATACTGGATTGAAATTAATTGCT
# Right flank :  ATGTTAATATTAAGGTTTTTAAAAAACTAGATAATAACCAAAGCGCTAACTCTGCATTTGAGTCAGCGCAGTTTGTTTTATTATTTAAAAAATTTAAATGATTTTGACAATCTTAAAAAAGGTTCTGTTGATTTTAACAAGAATTAATGAAAAGTGTTGATAGTTATATAAAAAATTGGGAGATGTTGAAATTATGGAGGAAGTACTGGATTTAATAATAAATTTAGTTAAGTTATTTATTATAGTTCCGTATTGGTTGATTAGTGTTGGTGTAACTGCCTTTTTTTATTTTAAGCTTGTCGTGTTTATTCGGAATACATTTAAAGCTTTTTTTGATAAATACTTTTATGGCGAAGACAGTGACTCTATTCCTTATGCTGTAGGTCCATATATAATGATAATAACTGCTATGCTTATTGGATTAGGAATAGTTATGGTAATTGTTTTATTTTTTAATGCACTTTTAGGGCAAAATTTGTATACCCTATTATTTATAGTTG

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATCAGAGAATACCCCGTATAAAAGGGGACGAGAACT
# Alternate repeat :   AATCAGAGAATACCCCGTATAAAAGGGGACGAGAACG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:56.76%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-6.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//