Array 1 1363903-1365372 **** Predicted by CRISPRDetect 2.4 *** >NZ_LKPS01000012.1 Pseudomonas aeruginosa strain 14649 contig_54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1363903 28 100.0 32 ............................ CTGCTGGACCTGTTCACCCGCGACCAATACAT 1363963 28 100.0 32 ............................ TTCAGGTCCCGCTGGCTGTTGGCGACGGCCCG 1364023 28 100.0 33 ............................ CAGCAGAAGCCGCTATGGGTGCCGACCCACGCC 1364084 28 100.0 32 ............................ ACGGGCGGGCCGTCGGTGCCGATGCTGACCGT 1364144 28 100.0 32 ............................ ATGTCGATCTGCTGCTTGCGACGCTCCCGCAT 1364204 28 100.0 33 ............................ ATGACCCTGCCGCCTACCGGGCCTCGTTCGTGG 1364265 28 100.0 32 ............................ TGTGGCTAGAGAGTCCGATGGGGGGGCGCTAT 1364325 28 100.0 32 ............................ CTGTCCTGCGATGGCTCCATCTCGATTGCGCC 1364385 28 100.0 32 ............................ TTGTCGGCGCCCTGGGCGTCAAGGCCGTACTC 1364445 28 100.0 32 ............................ TCGACGTTGCCGACCCGCGGCCGCGCCCGGTT 1364505 28 100.0 32 ............................ TCGGCCAAGGCTCCGGCATCGAGCACGATGCC 1364565 28 100.0 32 ............................ TTGAGGAACAGGCGCGCTACGTCCGCCGCGAA 1364625 28 100.0 32 ............................ TTGATGATGCCGTCCTGCTGTTTGCCGGCGAT 1364685 28 100.0 32 ............................ ATTCCGGCAGAGGTTCGCGAAGCGGACATTGA 1364745 28 100.0 32 ............................ TGTACCAACTGAGGTGCTACCTCAACCATGGC 1364805 28 100.0 32 ............................ AGGCCGATGGAGTAGCCGGACAGCACTGAGCC 1364865 28 100.0 32 ............................ TAGTGTGGAATTGATGTGCGCATCTTCTTAAA 1364925 28 100.0 32 ............................ TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA 1364985 28 100.0 32 ............................ GTCGGCCTGGAGTTTCGTCGGGCGTACATCAG 1365045 28 96.4 32 .................T.......... CAAGCGGACGGTGACACGGACTATCAGACCGG 1365105 28 100.0 32 ............................ TCCGGCACGCTGTGCTGAGCCTGAGCTACAGG 1365165 28 100.0 32 ............................ ATCTCAGCGCCGCCTGTTCTGCCGGCCGCATC 1365225 28 100.0 32 ............................ TACGGGCAGTCACGGCGAAAGGCACTCAGCGA 1365285 28 100.0 32 ............................ TGCGCCCTAAATCAGTGATCCGGCGAATTTGG 1365345 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 25 28 99.9 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GTGCGAGTAGCGAGAGCCGGTTAAACCCTTCACGAGAAGAAGGTGAAACCAACTTTACCAAGCTGCGGGTGGATGCGCAGCGCATCCAGAGTCTTTCTGGTGTGGCGGAGGGCTTGAATCTCTATCTAGCCGGTACCGCGCAAACCGCATTCGGCAAACGTTTGCTTTCGCCTGAACAATTTGGCGTGGGCGGCAGCGAGTTCGGGCGCGGCTATGATCCTTCGGAGATTACCGGCGACAGTGGTTTCGCGGTGAAGACGGAGTTGCAATACAACCGCGTTCATAGCTTCAAAGACCGCGCCGTTCCGACTCAGTATTATGGCTTTTTGTAGTGGTCAACCCATCCCGGACAGTGGGTTGAGTTTTTCTTCGGCCACCGCAGGTGGTAACCCGTCGTTGAATTGATGCGGCCTGATCCAGTTGTAGCNNNNNNNNNNGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //