Array 1 1356300-1356475 **** Predicted by CRISPRDetect 2.4 *** >NC_014034.1 Rhodobacter capsulatus SB 1003, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 1356300 37 100.0 32 ..................................... ACCCAGAACAGGTGTTTGAGCGGCCCACCCGC 1356369 37 100.0 33 ..................................... GAATGACAGCAACGTACAGCATCGTTTGCCTTT 1356439 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================= ================== 3 37 100.0 33 GCCCAGACACCTCTCCCGCCAGTAAGCGGATTGAGAC # Left flank : CAGCGCCGCCGCGCGCTGCTCGCTCAGCCGCGCCTCGAAGACCGAATATTGCACCCGCGTCGCGGCCCCTTCCAAAATCCGCGCCACCCGACGCCGCTTGCGGTCTTGCGACACGTCATAGGTGAAGACCATCAGCATCTCGGCGCGCGGCATGGCAGACCCTTTTCGGTGCAGATTTCGGGCCTCAGTCTGCCGCGAAACGGGGGGCTGCGAAAGCCCTTGCCGGGCGGGCGGCCCTGCGGCGGTCTGTCGTGGCGCGGGGCAATCTTGACGGTGGACAGGACGGATTTCGCCTGCCAGTTTGAACTTGAGAGGCGGAAAATCGGGCAAAATCGCCGATTCACCGTTGGAAACCCTGCCATGACCTTGAAGTCACAGGATAAAGGAGGAAAAACACGCAGCAAAACCGGGCTTGCAAGGGCTGTTTCGGAGTGTCGGGCACATCACGGTTGGAAAGCGGACCAGAAAGCGCTTTCGGGTCTTGGGTTTGCAGAGGGTAA # Right flank : CATGCCCTATTCAACGAGGGCGGCGCCACGGGACGGCAATCCTTGGCGAGTTCAGTAGTCCTGCAGCTGCGGCAGGTAGGGGACCGTTTCCGGGCTGCGGCAGTGGCGGGCGAGCGCGCGGGCCTCTTCGAGCATGATCCGGCGCAGGGCGTGGCGCTGTCCGGTCTGGCTGGAGCGGATCACCCGTTCCAGCGCCTCCTCGTAGCCGGTGATCAGCGCGCGCCGACCGGGGGTGAGGAGGCGCAGGCTGTCGCCCTGCGGCTCGAACATCTCCTCGCGCAGGCGGCGGCGGTTGAAGAGGCTCACCGCCAGCCCCTCGGAGAGGGTGGCGCGGAACACCTCCATCAGGTCATAGACGGCGGCGTCGCCCCGGTCCTGCGCCTGATGCAGCACGCCAAAGCCGGGGTGCAGCCCCGCGCCGATCAGCGCGGCGCGGATGTCGCGGGCCAAAAGCGCGGTCAGGTAATTGATCGCGGCGTTGAGGGGCGTTTTCGCCGGGC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCCAGACACCTCTCCCGCCAGTAAGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.20,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 1358648-1358970 **** Predicted by CRISPRDetect 2.4 *** >NC_014034.1 Rhodobacter capsulatus SB 1003, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1358648 37 100.0 34 ..................................... TCTTCCATCGAGCACTTGCAACCAAACACCCCGT 1358719 37 100.0 34 ..................................... CTCCTTTCTCCACCCCGCGGGGTGTGCGCACGTG 1358790 37 100.0 37 ..................................... GGGCGTATTCACGGCCCACCAACGCCCCCCATGCGGT 1358864 37 100.0 34 ..................................... GGAAGATTTTCGGTCATCTTACGCGATCCGCATA 1358935 36 81.1 0 ..................T.CA.......G.C-..C. | ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 96.2 35 GCCCAGACACCTCTCCCGCCAGTAAGCGGATTGAGAC # Left flank : GGTAGCCGTAGCTGTCGGGGGAAAACAGCGGCTCGAGCCGGGGGTCAGCGCGGCGGCGACGGCGGTTTGCACGATCCGGTCGGAGACGGCGGGGATGGCGAGGCGACGGGTGCCGCCGTCGGGCTTGGGGATCTCATGCAGGCGCAGCGGCCGGGGTGCGTAATTTCCGTTGCGCAACAGCCCCGACAGCCGCGCGATCGCCGCCGCCCCCTTGGCGGCAAAGGCTGCGATGCTTTGCCCGTCGCCCCCCGCACATCCGTTGTTGCGCCGCACCTTTTCGAATGCCAAGGTGAGGGCATGGGGGTCGGAAATCTGGCCAAACAGGCCCGAAAATCGGCCTTCGTCGTTGGAAATCATGCCATGCCCCTGCGGGATAAGGGAAAAAGCGAGGTGAGAGACACAGGAAACCAGAAAATCGGGCCCGAGTCGAGGGATGCGGCACGTCACGGTTGGAAAGCGGACCAAAAAGCGCTTTCGGGTCTTGGGTTTGCAGAGGGTAA # Right flank : CGAGGGGCGTCAGCCGCACCCTTCCCGCGCCGATGGTGGTGTCGGCGCCGATGTGCAGCGCCTCGGCCAGCGTGAGCAGGCGGCGCAGCTCGGGCGGGGGCGCGGAAAAGGCGATGCGGCCGGAAAAGCCCGGACGCGGTTTCGTGCCCCGCGCCAGCGCCCGCCGTTCGCCCGCAACGGCCGGGGGGGCGGCGCGCAGCGCCTCGGCCAGCTCCGCCTCGGGCAGATCGAGCGCAAAGCCGTGCCACTGCGCGATCCCCTTGGCGCGTTTGGCAAATCCTGTCAGCAGCGAGGCGGGATCGAGGCCCAGCCCCGCGTGATCGGCGCGCAGGCGCTGGATGATCGGGGTTTGCGTGCGCAAAGCCAGCGCCCCCGCAGGCGGGGGGGAAGCCGTCAGTTGCGCATGGGACACGGCGGTGATCTGCATCGGCACCCGGCCCGCGCGGCCCAGATCAAGGCCGCCGCGCAGCCCGGCAATCAGCGCGGCGCGAAACTCGGGC # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCCAGACACCTCTCCCGCCAGTAAGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.20,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 1395365-1398068 **** Predicted by CRISPRDetect 2.4 *** >NC_014034.1 Rhodobacter capsulatus SB 1003, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 1395365 32 100.0 37 ................................ TGCACCCGCTGGCCCTGCCGGTGATCGGTGATCAGCG 1395434 32 100.0 34 ................................ ATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGT 1395500 32 100.0 35 ................................ ATCTCGGTGCCGTCGCTCGTCCAGCCGGCCTGCTC 1395567 32 100.0 34 ................................ CACCTTGCGGATTGTCACTTTCGCGGGGCGAAGC 1395633 32 100.0 34 ................................ ATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCA 1395699 32 100.0 33 ................................ TGGTATGGATCTGGCGCAAACGGAAAGTCTGTC 1395764 32 100.0 36 ................................ CTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGAC 1395832 32 100.0 35 ................................ TGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCA 1395899 32 100.0 34 ................................ GATGCGTTCATGGCCTACGTCGGGCAGTGGACTG 1395965 32 100.0 35 ................................ TCGCCCTCGATCCGCGCTTGCCTCACGCCTGCCGC 1396032 32 100.0 35 ................................ AGGCGCATCTGATGTATATGCCCGGTGAGACGGCT 1396099 32 100.0 36 ................................ TTTTCGTCATCTGGCAGGCTCGCGCCGCCACGCTGC 1396167 32 100.0 36 ................................ CCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCT 1396235 32 100.0 35 ................................ AGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTC 1396302 32 100.0 36 ................................ AAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCT 1396370 32 100.0 36 ................................ CGCGCCCTGCGGGTGATGGCGACGGGCACCACGGCG 1396438 32 100.0 37 ................................ GGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCAC 1396507 32 100.0 34 ................................ TGCTTTCGTGGGACTGGCCAGCCGCCCGCGCCAA 1396573 32 100.0 34 ................................ GATTTCGTCGCTTACGACGCCTATCTGATTTCGG 1396639 32 100.0 35 ................................ CATGCGGCGATAACTCGCTCTTGCGATCCGTCATC 1396706 32 100.0 33 ................................ CCTGTCCCTCATATGCTGCCACGATGCCCTTGA 1396771 32 100.0 33 ................................ CGTGTGGATGATCATGCAGCGCGGACGGCTTGG 1396836 32 100.0 35 ................................ CGGTCCAGAGATAGACCGCGCGGACCTCCTCAGAC 1396903 32 100.0 34 ................................ AGCCTGCGCGGCCGCATCGGCTTCCGCCTGCGTG 1396969 32 100.0 33 ................................ ATCAGCTCGTCGTTGGTCAGCCGGACGATGTCC 1397034 32 100.0 34 ................................ TGCCGTCTTGAGTGATGGGGCGCGAGCACATGTC 1397100 32 100.0 35 ................................ GTCCAGCTCGCGCCACATGTCTTCGACCGTGCGCC 1397167 32 100.0 35 ................................ GTGTCTGCCACGACGCCCTGCACCAGATCCGCGCC 1397234 32 100.0 35 ................................ ACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAAC 1397301 32 96.9 35 .................A.............. GGCTTTACAGCCTTCGCGCCCCACGCCAGACGGAC 1397368 32 100.0 34 ................................ TCTTCAATGGATATGGCAAAACCGTCCGCGACAT 1397434 32 100.0 34 ................................ ACCGTCATCACCACGCAACCGCCCTGCACCACCG 1397500 32 100.0 35 ................................ AACCCGATCATGGCCCGCCTCAGCGCCGCGCTGAC 1397567 32 100.0 34 ................................ ATCCGCGGATCGGCGTGACCCGCCCCGCCCATCG 1397633 32 100.0 35 ................................ TACAGAGTTCCGGTCTTGTTCTGTTCCGGTAACAG 1397700 32 96.9 34 .................C.............. TTGTCTGACGCGCTCATCAGCACGTCAAGATTCA 1397766 32 100.0 38 ................................ GGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCAT 1397836 32 100.0 35 ................................ CCGGCACCTCAGCCCCGCCCGCTGTCTCACCAACA 1397903 32 100.0 36 ................................ TCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAA 1397971 32 100.0 34 ................................ CGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAA 1398037 32 93.8 0 ............................T..G | ========== ====== ====== ====== ================================ ====================================== ================== 41 32 99.7 35 GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC # Left flank : TCGACGCCTATCCGCCCTGGTTCTGGAGTTGAGATGCTGGTTCTGGTCACCTACGATGTGAACACGCTCGAAGAGGGCGGCAAGAAGCGGCTGCGCCGGGTGGCGAAAGCCTGCGAGGATTTCGGCCAGCGCGTGCAGTTCTCGGTCTTCGAGATCGAGGTGGACCCGGGGCAATGGGTGAAGCTGAAAGCGCGGCTGGAAGCGGTCATCCGGCCGGAGTTTGACAGTCTGAGGTATTATTATCTGGGGTCGAACTGGGAGCGGAACGTTGAACATGTCGGCGCCAAGCCTGCGCTTGACCTGAACGGCCCGTTGATCCTCTGATCTGCGAACCCCAAGGGTGTGGCCGTTTCCCACCCGGTTCGCACCGCGTCAGCTCTTTGAAATTGTGGATGAAGCACCGGAGCACCTTGCGCTGCCGCTCCGGAGGCGCTTGCGACAAGCACCTTCGCACCACCGGAGCAATTTACACCGTCTGGTCAGCGGGTTACGAAACGGCA # Right flank : GCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATTCCGCGCCCGGGGTCGAATCGGGCGATGATCGGAACGGTGGTGGAGGTGGGCGCGGACCGGCTGAACGCCTGGTTCGGGACCGCTGCCGCGGGTCGCTGATACCGCGCCCAGCTCTCATACGGGGCGATGGCGATGATGCTCCTGCGGACCTGACGGGATGCCGGACCGCCTGCGGCGCTCAGAATGTGACGGAGTTGGGGAGCGAGAACCGGCTACGGTCGGTTCGAGACCAGTGTCGCGGACTGTCGCCACGCGGATGCCGCCCCCCTCGGCCCTCATACGGGACGATGCCGGTGCTGTTCCTGCGGACCGGACGGGGTGTCGGCCTGCCTGCGGGTCGCAAAACGGAATGGAAATGAGCGCGACCGGCGTGCGCCTCGAACGCGAGGCCCTGCGGTGGGCGCGGCGGCGGTCAAATGTGTCGGGGAGCGTGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.30,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 1434350-1434909 **** Predicted by CRISPRDetect 2.4 *** >NC_014034.1 Rhodobacter capsulatus SB 1003, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1434350 32 100.0 33 ................................ GTCTCCGCTCTGCTTCACGGCTGCGTCAACCTT 1434415 32 100.0 34 ................................ ACGGATTGCATGGCGCCGAGGGACAGGCTTTGCA 1434481 32 100.0 34 ................................ CGCCCGCGGCGTTTGACCTGGTCGCGGGCAGCTG 1434547 32 100.0 35 ................................ GACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTT 1434614 32 100.0 34 ................................ ACGGATTGCATGGCGCCGAGGGACAGGCTTTGCA 1434680 32 100.0 34 ................................ CGCCCGCGGCGTTTGACCTGGTCGCGGGCAGCTG 1434746 32 100.0 35 ................................ GACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTT 1434813 32 100.0 33 ................................ ATGGAAAACCGCGGCTTCACCGCGCGGGATTGG 1434878 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 9 32 100.0 34 GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC # Left flank : CAGCGATATCTCGGCGTCGCCGATCCGGATCTGACAGGCGGCCGCGTCAGCGGCGCCTTTCTGCTTCGCTTGGCGCGCCGGTTCCGAAGGGACCATCACCTCGACGAACTGCGGAGACTTGCCCTGCGAAGCAGCCTTTCCCTGCGGCCTCCCCCGGCGCGGCAGCTCGGGCAATTCGGCGCGCGCCCATTTCGCGACTAGGGACTCATTGGCGCCGATCTCCTTGGCGACGGTGACGATCTTGGTGCCGGCCTCGATCTTCTTCACCGCCATCGCCTTGATCTCATCGGGCCAGACTCGACGCCCGTTGTCGGCGGTGATCACCGGGATTCCCCAGACCACCACATCGCCGCCCTCCTTCTCGTCCAACATCTCGACCTCCTTCGAACAGAGAGAGGGCGATCATCGCAAAACCCTTATTTCATTGGAACATGGGGTATATGCACCGCTTACCGTGGATCGAAACAGGCTGCTTTGGGCGGAACACCTGATCCTGCTGG # Right flank : CCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCAACGATCCGCCGCGACATGTCCGAAAATCGGACGCTCTGATTGCGAAAACTCGGCTATCCTGTTGCGGTCTTCCAGCTGCCTGCACACTGTGCCGGCCTATGGAACGGGAGATCCATGGACCGGGAGACCGCTATCGACAGCAGATCGGCCATTCGTTCGGGGGAGGAGCAGATGGCACACCGTATCAGAAAGCGCGGCTGGGAGGAGTTCATGGCGGTTGGCCGCGCGTCTCCGGATGTCCGCAGCGAAGTTTTGCAGAGTTGGCAGCGGTCCGCGGGGCGACGGATCGAAAAGCTGAAACAAGCGCCGCTCCTGAGCGAGGAGGACTTGCTGACGCAGAGGGCGCAGGCGCGCCGCCTGCGGTCCGGCGCGCGCGGGGTTCTGAACAGGGCAGGAAGTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.30,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 2158040-2157729 **** Predicted by CRISPRDetect 2.4 *** >NC_014034.1 Rhodobacter capsulatus SB 1003, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 2158039 37 100.0 32 ..................................... CCTTTCGGCATCGTAGAACCTCTTGTTTAGGT 2157970 37 97.3 31 .......G............................. GAAGGCCGTGATTTTCATCGGTCTCTCCTGT 2157902 37 97.3 33 ..A.................................. TGATGGTCGCCAGCGGTTTGGTATGCTGGGAGA 2157832 37 100.0 30 ..................................... CATGATGTTCCTTTCTTGGGTATGGGGTAA 2157765 37 75.7 0 ....................T........GAACCCAA | ========== ====== ====== ====== ===================================== ================================= ================== 5 37 94.1 32 GCCTCACATCACCGCCAAGACGACGGCGGACTGAACC # Left flank : TAGGATCGCTTGACAGATGAGCGGGCAGCTCCTTGCGGTTCTTGCCATCGGTGCTGATCTTGCGTTTGAGCCCCCCCGCCGGATCGCCGAATTCGCTGATCGTCCGCCCTTGAACCTTGCCAATCTGCATTGTCGCGCCCCCAGCACAAAACCCACCAAGGCAAGGATGCAAGCCGTCAAGCCCATTCGCAACAGTTCCGTTGGGCCGGGCCGATTTGCCGCACCATCTGCCCGGTTTTCGACGTTCGGGGCGCGACAAAGCCTGTAGCCATCGCATCGGACTTCGCCTAGGCTTGCCGAAACCCGCCGCCTGCAGCGGCATCGGGTCGGAAATTCGGCAAGGAGGGTTCAGAAAACGCGCAATACACTGACACGGAAAGAGTAATTGCCACTGGAGCGGCGCGGAAATGCAAAAAAGGTCTCAAAATACGGCCTTGATCGTCCAGGGTTCCGAAACCCTGCTTGAAGATCTTGGCGTCTCAATGGCTTGCGGGACCTGA # Right flank : TGCAAACGGAGGTGCGGCAACAGCAAGGTTGCACCGGCTGGACTTCGGCGGCAGTCTGGCGCAACGGGGCGCAGGACACGGAAGATGTGGCGGGGGCAAGATGGACCTGTTTTTCAAGGCCACGGAATATGAGACCCTGCAGGCCTCATGGCTCAAGGTCCAGCAAAACGGCGGCGCGGCGGGGGGTGACGGCGTCACCATCGCCACCTTTGCCCAAGGGGCCACCGCATCTCTGCGCGATCTTGCGCTGGCATTGCGCGCGGGCGGCTGGCAGCAAGGCCCCTGCCGCCGCGTCGACATTCCCAAGCGCAAGGGCGGCACTAGGCGGTTGATGATCCCGCCGATCGCCGACCGCATAATTCATGGGACCGCATAATTCATGGGGCAATCGCCGAAACGCTGGAGCCGATCCTGGATGCGACGTTCGAGATCGGTGAGGGTGTCCGGCCGGGTCGCCAGCAGGCGCTCGAACTCGCTGCGGACCGTCAGCTGGAAGCGCA # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCACATCACCGCCAAGACGACGGCGGACTGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //