Array 1 3013-3700 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVEN010000011.1 Citrobacter koseri strain CB00172 CB00172_c0011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3013 28 100.0 32 ............................ TTTAGTGCTAAATTTTCGCCTGATGCGTTTTC 3073 28 100.0 32 ............................ AATATGCCCCCGGCGTGCAGGGTGATTGATAA 3133 28 100.0 32 ............................ AACCCGCACGCAACAGCATTTTGCGCGTGAGT 3193 28 100.0 32 ............................ ACCTGCTTAACATCCTCTTTGAAGAAACGGAT 3253 28 100.0 32 ............................ GGGTTGGCAAGCAAACAAGATGCCGATAACCG 3313 28 100.0 32 ............................ ACACGGCAACTGGATAGACTCAGAACCACGAA 3373 28 100.0 32 ............................ TGGCACAGTTACATCAAGAGGAACTGTGCCAG 3433 28 100.0 32 ............................ AGTCAGCAAAATACCGCCAGGCTGATGTTGCA 3493 28 100.0 32 ............................ AGGACGATATCGGTAGCCGCTGAGATTCAGCG 3553 28 100.0 32 ............................ TACCATCGCAATCGCCGTTGCAAATGCCGCAT 3613 28 100.0 32 ............................ AATCAAAATCCCATCAACAACACGTTCCTGGC 3673 28 82.1 0 ...........C........T.C..T.T | ========== ====== ====== ====== ============================ ================================ ================== 12 28 98.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGAACTGCATCACTGGCCCGGACTGAGCCTGGCTTCAGGTAAACATATCCACCGCTGGGAACTCTTTGGTCCACAGGGCGCGCGTGCTGAAGTTCACTTTACACCGCGTTTGATCACCACAGACATGCTGGCGCTGCGTGAAGCGGCCGTTGCGGGCGTCGGCCTCGTTCAGTTACCTGTTTTAATGGTGAAAGACCAACTGGCTGCGGGGGAGCTGGTTGCCTTGCTGGAAGGATGGGAACCCAGAAGAGAGGTGATTCATGCGGTGTTTCCGTCCCGCCGTGGATTGTTGCCGTCCGTACGCGCGCTGGTGGATTTTTTGACAGAAGAGTATGCGCGGATGGTGGAGGATTAAAACAGAGCGCAATATACCCTTTTTTATTTTATGTTACTAACTTATTGATTTTATTTTATATATACAACTTGGGTGAAAAAGGGTCTGACAGGAAGACGTTGCGTTTTTCTTCAATAAATCAACGTGATTGTCTGATATTATTCCT # Right flank : TTTAATGTAGAAGGAAGGGAAGCTGCGGGGAATAAAAATAACGTTAATTCGCATCAACGGTATTCATGCAGGAAAGGGACAACAAAAAGGCCGGATAAACCGACCTTTTTTTATCTTTACGCCACCCGGGCGTGAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTACGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAATTCTACGCGGAACATGGTATTAGGTAACGTTTCGAGAACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTTTAAATAAGTAAAGATTTGCGCGTTTAAAACGCAGCAAATCAGGTTTGGCGCATTACTCCGAAAAACACGGCAAAGCCGCAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //